BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,701,951	T→C	S128G (AGC→GGC)	b1624 ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,701,951	0	T	C	99.1%	651.6 / ‑2.8	211	S128G (AGC→GGC)	b1624	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (2/0); new base C (108/101); total (110/101)
Fisher's exact test for biased strand distribution p-value = 4.99e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.29e-01

Only 100 of 217 total aligned reads displayed.

GCGGACGGAAGCGGTCAAAATGAGACTCAAAGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCTATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCTCTCGCGCTTGTGACAGTGTCACGG  >  NC_000913/1701861‑1702040

gCGGACGGAAGGGGTCAAAATGAGACTCAAAGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCAt                                                                                         <  2:2712483/93‑1 (MQ=255)

gCGGACGGAAGCGGTCAAAATGAGACTCAAAGTAAGCACCTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCAt                                                                                         <  2:7039149/93‑1 (MQ=255)

gCGGACGGAAGCGGTCAAAATGAGACTCAAAGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCAt                                                                                         <  2:2648722/93‑1 (MQ=255)

  ggacggaAGCGGTCAAAATGAGACTCAAAGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATcc                                                                                       <  1:1682329/93‑1 (MQ=255)

   gacggaAGCGGTCAAAATGAGACTCAAAGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATccc                                                                                      <  1:8753126/93‑1 (MQ=255)

     cggaAGCGGTCAAAATGAGACTCAAAGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAg                                                                                    <  2:4684784/93‑1 (MQ=255)

      ggaAGCGGTCAAAATGAGACTCAAAGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGc                                                                                   >  2:3140278/1‑93 (MQ=255)

       gaAGCGGTCAAAATGAGACTCAAAGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGca                                                                                  >  2:362238/1‑92 (MQ=255)

       gaAGCGGTCAAAATGAGACTCAAAGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCg                                                                                  >  2:1944779/1‑93 (MQ=255)

       gaAGCGGTCAAAATGAGACTCAAAGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCg                                                                                  >  1:7707797/1‑93 (MQ=255)

        aaGCGGTCAAAATGAGACTCAAAGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGa                                                                                 <  1:5791698/93‑1 (MQ=255)

         aGCGGTCAAAATGAGACTCAAAGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGAc                                                                                >  2:2521528/1‑93 (MQ=255)

            ggTCAAAATGAGACTCAAAGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGt                                                                             <  1:8264532/93‑1 (MQ=255)

              tCAAAATGAGACTCAAAGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGtga                                                                           >  2:8741701/1‑91 (MQ=255)

               cAAAATGAGACTCAAAGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTAt                                                                          <  1:5890407/93‑1 (MQ=255)

                aaaaTGAGACTCAAAGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATg                                                                         <  2:8348259/93‑1 (MQ=255)

                 aaaTGAGACTCAAAGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATgg                                                                        >  1:4712548/1‑93 (MQ=255)

                   aTGAGACTCAAAGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGaa                                                                      >  2:9363817/1‑93 (MQ=255)

                   aTGAGACTCAAAGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGaa                                                                      >  2:2051697/1‑93 (MQ=255)

                    tGAGACTCAAAGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAAt                                                                     >  1:1121257/1‑93 (MQ=255)

                    tGAGACTCAAAGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAAt                                                                     >  1:8958499/1‑93 (MQ=255)

                     gagaCTCAAAGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATa                                                                    <  2:7341757/93‑1 (MQ=255)

                      agaCTCAAAGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATac                                                                   <  2:6060063/93‑1 (MQ=255)

                      agaCTCAAAGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATac                                                                   <  2:4092804/93‑1 (MQ=255)

                      agaCTCAAAGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATac                                                                   <  2:1011870/93‑1 (MQ=255)

                        aCTCAAAGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATacag                                                                 <  2:8395619/93‑1 (MQ=255)

                         cTCAAAGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAACCCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATacaga                                                                <  2:1575299/93‑1 (MQ=255)

                         cTCAAAGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATacaga                                                                <  1:6599481/93‑1 (MQ=255)

                          tCAAAGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATacagac                                                               >  1:8389624/1‑93 (MQ=255)

                           cAAAGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATacagaca                                                              <  1:5552665/93‑1 (MQ=255)

                            aaaGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATaccgacag                                                             <  1:9546041/93‑1 (MQ=255)

                            aaaGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATacagacag                                                             >  1:9271241/1‑93 (MQ=255)

                            aaaGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATacagacag                                                             >  1:8246322/1‑93 (MQ=255)

                            aaaGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATacagacag                                                             <  2:555322/93‑1 (MQ=255)

                            aaaGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATacagacag                                                             >  1:6908362/1‑93 (MQ=255)

                            aaaGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATacagacag                                                             >  2:6468642/1‑93 (MQ=255)

                             aaGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGc                                                            <  2:2214949/93‑1 (MQ=255)

                                tAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAGCCTTTTAGCGTCAAGAAATCGCCATCCCAGCGCCGGTTATGGAATACAGACAGcaca                                                         <  2:4254259/93‑1 (MQ=255)

                                tAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGcaca                                                         <  2:9763887/93‑1 (MQ=255)

                                 aaGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCacac                                                        <  1:4832860/93‑1 (MQ=255)

                                 aaGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCacac                                                        <  2:6165328/93‑1 (MQ=255)

                                  aGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACg                                                       <  1:9061211/93‑1 (MQ=255)

                                    cAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGcc                                                     <  1:3190515/93‑1 (MQ=255)

                                      aCTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGCTATGGAATACAGACAGCACACGcccc                                                   >  2:7484340/1‑93 (MQ=255)

                                          cACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGc                                               >  2:4927393/1‑93 (MQ=255)

                                            cccAGCACGCCTTCCGCGAGTAACCCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCtt                                             <  2:3871758/93‑1 (MQ=255)

                                             ccAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCttt                                            >  1:3158979/1‑93 (MQ=255)

                                              cAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCtttt                                           >  1:1204465/1‑93 (MQ=255)

                                               aGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGCTATGGAATACAGACAGCACACGCCCCAGGCttttt                                          >  1:5014309/1‑93 (MQ=255)

                                                gCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTg                                         <  1:2644362/93‑1 (MQ=255)

                                                   cGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCa                                      >  1:6351107/1‑93 (MQ=255)

                                                   cGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCa                                      >  1:7473692/1‑93 (MQ=255)

                                                    gCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAg                                     >  1:6821086/1‑93 (MQ=255)

                                                     ccTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAgc                                    >  2:7817961/1‑93 (MQ=255)

                                                      cTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAgcg                                   >  1:1465239/1‑93 (MQ=255)

                                                       ttCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAgcgc                                  >  1:2863055/1‑93 (MQ=255)

                                                       ttCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAgcgc                                  >  2:3233729/1‑93 (MQ=255)

                                                       ttCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGAAAGCACACGCCCCAGGCTTTTTGCCAgcgc                                  >  2:902392/1‑93 (MQ=255)

                                                       ctCCGCGAAGAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAgcgc                                  <  1:8694393/92‑1 (MQ=255)

                                                        tCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCa                                 <  1:1563873/93‑1 (MQ=255)

                                                        tCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCa                                 >  2:5124380/1‑93 (MQ=255)

                                                           gcgAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATcc                              >  2:8568839/1‑93 (MQ=255)

                                                            cgAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCa                             <  1:4901240/93‑1 (MQ=255)

                                                             gAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAg                            <  1:9207834/93‑1 (MQ=255)

                                                             gAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAg                            <  1:3219123/93‑1 (MQ=255)

                                                             gAGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAg                            <  2:7739632/93‑1 (MQ=255)

                                                              aGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGc                           >  1:3051966/1‑93 (MQ=255)

                                                              aGTAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGc                           <  1:9684779/93‑1 (MQ=255)

                                                                tAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGctc                         >  2:810896/1‑93 (MQ=255)

                                                                tAAACCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGctc                         >  2:2706124/1‑93 (MQ=255)

                                                                 aaaCCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGctct                        >  1:8192606/1‑93 (MQ=255)

                                                                  aaCCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCtctc                       >  1:6981137/1‑93 (MQ=255)

                                                                  aaCCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCtctc                       >  2:6742195/1‑93 (MQ=255)

                                                                  aaCCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCtctc                       <  1:1678043/93‑1 (MQ=255)

                                                                   aCCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCTCTcg                      >  1:4016162/1‑93 (MQ=255)

                                                                   aCCTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCTCTcg                      >  2:8892711/1‑93 (MQ=255)

                                                                    ccTTTTAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCTCTcgc                     >  1:8970450/1‑93 (MQ=255)

                                                                       tttAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCTCTCGCGCt                  >  2:5793082/1‑93 (MQ=255)

                                                                        ttAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCTCTCGCGCtt                 <  1:4202814/93‑1 (MQ=255)

                                                                        ttAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCTCTCGCGCtt                 >  2:7636921/1‑93 (MQ=255)

                                                                         tAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCTCTCGCGCTtg                <  2:3339485/93‑1 (MQ=255)

                                                                         tAGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCTCTCGCGCTtg                <  2:5381890/93‑1 (MQ=255)

                                                                          aGCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAAACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCTCTCGCGCTtgt               <  2:4542519/93‑1 (MQ=255)

                                                                           gCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCTCTCGCGCTtgtg              <  2:9216601/93‑1 (MQ=255)

                                                                           gCGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCTCTCGCGCTtgtg              >  1:3869712/1‑93 (MQ=255)

                                                                            cGTCAAGACATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCTCTCGCGCTTGTGa             <  1:2347793/93‑1 (MQ=255)

                                                                            cGTCAAGAAATCGCTATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCTCTCGCGCTTGTGa             >  1:2727761/1‑93 (MQ=255)

                                                                            cGTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCTCTCGCGCTTGTGa             <  2:2161436/93‑1 (MQ=255)

                                                                             gTCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCTCTCGCGCTTGTGAc            <  1:2094002/93‑1 (MQ=255)

                                                                             gTCAAGAAATCCCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCTCTCGCGCTTGTGAc            <  1:7251006/93‑1 (MQ=255)

                                                                              tCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCTCTCGCGCTTGTGACa           <  2:9283565/93‑1 (MQ=255)

                                                                              tCAAGAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCTCTCGCGCTTGTGACa           >  1:3544448/1‑93 (MQ=255)

                                                                                  gAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCTCTCGCGCTTGTGACAgtgt       >  1:2408998/1‑93 (MQ=255)

                                                                                  gAAATCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCTCTCGCGCTTGTGACAgtgt       <  1:8345808/93‑1 (MQ=255)

                                                                                   aaaTCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCTCTCGCGCTTGTGACAGTGTc      >  2:6753726/1‑93 (MQ=255)

                                                                                    aaTCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCTCTCGCGCTTGTGACAGTGTCa     >  2:6255221/1‑93 (MQ=255)

                                                                                    aaTCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCTCTCGCGCTTGTGACAGTGTCa     >  1:7044154/1‑93 (MQ=255)

                                                                                     aTCGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCTCTCGCGCTTGTGACAGTGTCAc    >  2:2109644/1‑93 (MQ=255)

                                                                                      ccGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCTCTCGCGCTTGTGCCAGTGTCACg   <  2:1661473/92‑1 (MQ=255)

                                                                                       cGCCATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCTCTCGCGCTTGTGACAGTGTCACgg  <  2:9820859/93‑1 (MQ=255)

GCGGACGGAAGCGGTCAAAATGAGACTCAAAGTAAGCAACTTCACCCAGCACGCCTTCCGCGAGTAAACCTTTTAGCGTCAAGAAATCGCTATCCCAGCGACGGTTATGGAATACAGACAGCACACGCCCCAGGCTTTTTGCCAGCGCATCCAGCTCTCGCGCTTGTGACAGTGTCACGG  >  NC_000913/1701861‑1702040

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`