BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	196,710	C→T	L55L (CTC→CTT)	yaeL →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	196,710	0	C	T	99.1%	1170.6 / ‑3.5	324	L55L (CTC→CTT)	yaeL	hypothetical protein
Reads supporting (aligned to +/- strand): ref base C (2/1); new base T (161/160); total (163/161)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01

Only 100 of 332 total aligned reads displayed.

TCATTTCTGGGTTGCCCGGCGTTGTGGTGTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTCGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGAACCGGTCGTTCCGGAACTCCGCC  >  NC_000913/196620‑196801

 cATTTCTGGGTTGCCCGGCGTTGTGGTGTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGc                                                                                          >  1:1028819/1‑93 (MQ=255)

  aTTTCTGGGTTGCCCGGCGTTGTGGTGTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCa                                                                                         <  1:668754/93‑1 (MQ=255)

  aTTTCTGGGTTGCCCGGCGTTGTGGTGTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCa                                                                                         >  1:2498487/1‑93 (MQ=255)

    ttCTGGGTTGCCCGGCGTTGTGGTGTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCAcc                                                                                       >  1:7511167/1‑93 (MQ=255)

    ttCTGGGTTGCCCGGCGTTGTGGTGTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCAcc                                                                                       >  2:4421666/1‑93 (MQ=255)

        gggTTGCCCGGCGTTGTGGTGTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAat                                                                                   <  1:9078978/93‑1 (MQ=255)

         ggTTGCCCGGCGTTGTGGTGTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAata                                                                                  >  1:15229/1‑93 (MQ=255)

         ggTTGCCCGGCGTTGTGGTGTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAata                                                                                  <  1:5935752/93‑1 (MQ=255)

         ggTTGCCCGGCGTTGTGGTGTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAata                                                                                  <  1:337129/93‑1 (MQ=255)

          gTTGCCCGGCGTTGTGGTGTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAatat                                                                                 >  2:4349235/1‑93 (MQ=255)

          gTTGCCCGGCGTTGTGGTGTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAatat                                                                                 >  1:7384329/1‑93 (MQ=255)

             gCCCGGCGTTGTGGTGTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGtt                                                                              <  1:870226/93‑1 (MQ=255)

              cccGGCGTTGTGGTGTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTa                                                                             <  1:53622/93‑1 (MQ=255)

               ccGGCGTTGTGGTGTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATACGCTTGGCACCGAATATGTTAt                                                                            >  1:3531937/1‑93 (MQ=255)

                cGGCGTTGTGGTGTTCGCGTTGAGCGTTTCTCAATAGGGTCTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATc                                                                           >  1:933899/1‑93 (MQ=255)

                 ggCGTTGTGGTGTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCg                                                                          >  2:4628374/1‑93 (MQ=255)

                 ggCGTTGTGGTGTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCg                                                                          >  2:2694741/1‑93 (MQ=255)

                    gTTGTGGTGTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGccc                                                                       <  1:6848121/93‑1 (MQ=255)

                     ttGTGGTGTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCt                                                                      >  1:453114/1‑93 (MQ=255)

                     ttGTGGTGTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCt                                                                      <  2:6248317/93‑1 (MQ=255)

                     ttGTGGTGTTCGCGTTGAGCGTTTCTCAATAGGGTTTAGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCt                                                                      <  1:7140707/93‑1 (MQ=255)

                      tgtgGTGTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTg                                                                     <  1:5244087/93‑1 (MQ=255)

                       gtggtgTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGa                                                                    <  1:6208054/93‑1 (MQ=255)

                        tggtgTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGAt                                                                   >  2:1014229/1‑93 (MQ=255)

                         ggtgTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATc                                                                  <  1:7051370/93‑1 (MQ=255)

                          gtgtTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATcc                                                                 <  1:2229485/93‑1 (MQ=255)

                          gtgtTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATcc                                                                 >  2:2367089/1‑93 (MQ=255)

                          gtgtTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGAGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATcc                                                                 >  1:1645599/1‑93 (MQ=255)

                           tgtTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATccc                                                                >  2:9878244/1‑93 (MQ=255)

                           tgtTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATccc                                                                <  2:9398418/93‑1 (MQ=255)

                            gtTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCg                                                               <  2:1723967/93‑1 (MQ=255)

                             ttCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGt                                                              >  2:6889252/1‑93 (MQ=255)

                                gcgTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCCAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTgg                                                           <  2:1586593/93‑1 (MQ=255)

                                gcgGTGAGTGTTTCTCAATAGGGTTTCGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGCTCCCGTTgg                                                           <  2:5316670/93‑1 (MQ=255)

                                  gTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTgggg                                                         >  2:7973601/1‑92 (MQ=255)

                                  gTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGc                                                         >  1:8165603/1‑93 (MQ=255)

                                   ttGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCg                                                        >  2:2154994/1‑93 (MQ=255)

                                      aGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGtt                                                     <  1:4150304/93‑1 (MQ=255)

                                       gCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTa                                                    <  1:6402975/93‑1 (MQ=255)

                                       gCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTa                                                    <  2:755120/93‑1 (MQ=255)

                                       gCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTa                                                    <  2:9589402/93‑1 (MQ=255)

                                        cGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTAt                                                   >  1:8409285/1‑93 (MQ=255)

                                         gTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATg                                                  >  1:4407026/1‑93 (MQ=255)

                                          tttCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGt                                                 >  2:5577636/1‑93 (MQ=255)

                                          tttCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGt                                                 >  1:9893136/1‑93 (MQ=255)

                                          tttCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGt                                                 >  1:3198737/1‑93 (MQ=255)

                                          tttCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGt                                                 <  1:6117836/93‑1 (MQ=255)

                                            tctcAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCa                                               >  2:4902424/1‑93 (MQ=255)

                                            tctcAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCa                                               >  2:7076721/1‑93 (MQ=255)

                                              tcAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCaaa                                             <  1:5795090/93‑1 (MQ=255)

                                              tcAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCaaa                                             >  1:5612538/1‑93 (MQ=255)

                                              tcAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCaaa                                             <  2:1097908/93‑1 (MQ=255)

                                               cAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCaaaa                                            <  2:5046244/93‑1 (MQ=255)

                                               cAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGGTATGTCaaaa                                            >  2:4463289/1‑93 (MQ=255)

                                                aaTAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAAt                                           <  2:1453235/93‑1 (MQ=255)

                                                aaTAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAAt                                           >  2:104363/1‑93 (MQ=255)

                                                   aGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGTGCGGTTATGTGAAAATGcg                                        >  2:8736850/1‑92 (MQ=255)

                                                   aGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCt                                        <  2:284672/93‑1 (MQ=255)

                                                     ggTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTgg                                      >  1:2831095/1‑93 (MQ=255)

                                                      gTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGa                                     <  2:4538567/93‑1 (MQ=255)

                                                          tgTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAg                                 <  2:8571124/92‑1 (MQ=255)

                                                          ggTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAg                                 >  2:4040975/1‑93 (MQ=255)

                                                          ggTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAg                                 >  2:7850526/1‑93 (MQ=255)

                                                           gTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAgc                                <  1:7564416/93‑1 (MQ=255)

                                                            tAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAgcg                               >  1:5944545/1‑93 (MQ=255)

                                                             aaGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAgcgc                              >  2:2498241/1‑93 (MQ=255)

                                                             aaGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAgcgc                              >  2:5520712/1‑93 (MQ=255)

                                                             aaGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAgcgc                              >  1:922867/1‑93 (MQ=255)

                                                               ggCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAgcgcgc                            >  2:186261/1‑93 (MQ=255)

                                                                gcgcTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCa                           <  2:2241665/93‑1 (MQ=255)

                                                                gcgcTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCa                           <  1:5754033/93‑1 (MQ=255)

                                                                  gcTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGa                         >  1:2394404/1‑93 (MQ=255)

                                                                   ctctGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGaa                        <  1:126613/93‑1 (MQ=255)

                                                                   ctctGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGaa                        <  2:7317957/93‑1 (MQ=255)

                                                                   ctctGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGaa                        >  2:3597970/1‑93 (MQ=255)

                                                                   ctctGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGaa                        >  2:310463/1‑93 (MQ=255)

                                                                    tctGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGAAc                       >  2:7013204/1‑93 (MQ=255)

                                                                    tctGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGAAc                       <  1:6741633/93‑1 (MQ=255)

                                                                     ctGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGAAcc                      <  2:2053285/93‑1 (MQ=255)

                                                                      tGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGAACCg                     <  1:1084851/93‑1 (MQ=255)

                                                                      tGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGAACCg                     <  2:6759499/93‑1 (MQ=255)

                                                                        gcggcgAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGAACCGGt                   <  2:6377698/93‑1 (MQ=255)

                                                                        gcggcgAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGAACCGGt                   <  2:3391578/93‑1 (MQ=255)

                                                                         cggcgAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGAACCGGTc                  <  1:7742481/93‑1 (MQ=255)

                                                                         cggcgAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGAACCGGTc                  <  2:4738880/93‑1 (MQ=255)

                                                                          ggcgAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGAACCGGTCg                 <  1:6601308/93‑1 (MQ=255)

                                                                           gcgAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGAACCGGTCGt                >  1:8002315/1‑93 (MQ=255)

                                                                             gAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGAACCGGTCGTTc              <  1:1207083/93‑1 (MQ=255)

                                                                             gAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGAACCGGTCGTTc              <  1:649314/93‑1 (MQ=255)

                                                                              aaCTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGAACCGGTCGTTcc             <  2:5740291/93‑1 (MQ=255)

                                                                              aaCTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGAACCGGTCGTTcc             <  1:5501531/93‑1 (MQ=255)

                                                                                cTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGAACCGGTCGTTCCgg           >  2:3702013/1‑93 (MQ=255)

                                                                                cTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGAACCGGTCGTTCCgg           <  1:1844963/93‑1 (MQ=255)

                                                                                 tGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGAACCGGTCGTTCCGGa          >  1:2932685/1‑93 (MQ=255)

                                                                                  gATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGAACCGGTCGTTCCGGaa         >  2:617833/1‑93 (MQ=255)

                                                                                   aTAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGAACCGGTCGTTCCGGAAc        >  2:8900457/1‑93 (MQ=255)

                                                                                   aTAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGAACCGGTCGTTCCGGAAc        <  1:8274113/93‑1 (MQ=255)

                                                                                    tAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGAACCGGTCGTTCCGGAACt       >  1:4494090/1‑93 (MQ=255)

                                                                                     aaGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGAACCGGTCGTTCCGGAACTc      <  2:5616035/93‑1 (MQ=255)

                                                                                       gCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGAACCGGTCGTTCCGGAACTccc    >  1:9267746/1‑92 (MQ=255)

TCATTTCTGGGTTGCCCGGCGTTGTGGTGTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTCGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGAACCGGTCGTTCCGGAACTCCGCC  >  NC_000913/196620‑196801

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`