BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,759,194	C→T	A208T (GCA→ACA)	ynhC ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,759,194	0	C	T	98.7%	828.6 / ‑2.8	234	A208T (GCA→ACA)	ynhC	hypothetical protein
Reads supporting (aligned to +/- strand): ref base C (1/2); new base T (107/123); total (108/126)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.24e-01

Only 100 of 239 total aligned reads displayed.

CCTCAGCCAGCAACAAATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGCGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCG  >  NC_000913/1759104‑1759283

ccTCAGCCAGCAACAAATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGa                                                                                         <  1:6193075/93‑1 (MQ=255)

 cTCAGCCAGCAACAAATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGAc                                                                                        <  1:5206200/93‑1 (MQ=255)

 cTCAGCCAGCAACAAATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGAc                                                                                        <  2:6194870/93‑1 (MQ=255)

   cagccagcAACAAATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGt                                                                                      <  1:3749312/93‑1 (MQ=255)

     gccagcAACAAATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTg                                                                                    <  2:11480/93‑1 (MQ=255)

     gccagcAACAAATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTg                                                                                    <  2:2295937/93‑1 (MQ=255)

      ccagcAACAAATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGa                                                                                   >  2:8730923/1‑93 (MQ=255)

      ccagcAACAAATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGa                                                                                   >  1:2272108/1‑93 (MQ=255)

      ccagcAACAAATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGa                                                                                   >  1:3225050/1‑93 (MQ=255)

      ccagcAACAAATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGa                                                                                   >  1:3387746/1‑93 (MQ=255)

       cagcAACAAATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGAt                                                                                  <  2:6654142/93‑1 (MQ=255)

       cagcAACAAATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGAt                                                                                  >  1:485662/1‑93 (MQ=255)

        agcAACAAATCGTTATGAGCAAAGTGGTGACTGGGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATa                                                                                 >  2:4860072/1‑93 (MQ=255)

        agcAACAAATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATa                                                                                 <  2:6681873/93‑1 (MQ=255)

           aacaaATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTg                                                                              >  1:4605362/1‑93 (MQ=255)

            acaaATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGa                                                                             >  2:4345725/1‑93 (MQ=255)

            acaaATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGa                                                                             >  2:529983/1‑93 (MQ=255)

            acaaATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGa                                                                             >  1:5144399/1‑93 (MQ=255)

             caaATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGaa                                                                            >  2:3618282/1‑93 (MQ=255)

             caaATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGaa                                                                            <  1:9765936/93‑1 (MQ=255)

               aaTCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAAcc                                                                          >  1:5842247/1‑93 (MQ=255)

                 gcggtATGAGAAAAGTGGTGGATGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGt                                                                        <  1:10013970/89‑1 (MQ=255)

                   gTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGc                                                                      >  1:7424208/1‑93 (MQ=255)

                    ttATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGcc                                                                     <  2:4203503/93‑1 (MQ=255)

                        gAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCgg                                                                 <  1:2972325/93‑1 (MQ=255)

                        gAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCgg                                                                 >  1:5452534/1‑93 (MQ=255)

                        gAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCgg                                                                 >  2:8389328/1‑93 (MQ=255)

                           cAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTaa                                                              >  1:714952/1‑93 (MQ=255)

                            aaaGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTaaa                                                             <  2:9520735/93‑1 (MQ=255)

                             aaGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTaaaa                                                            <  2:7250012/93‑1 (MQ=255)

                             aaGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTaaaa                                                            <  1:7615313/93‑1 (MQ=255)

                             aaGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTaaaa                                                            <  1:6462797/93‑1 (MQ=255)

                               gtggtgACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATg                                                          <  2:6524753/93‑1 (MQ=255)

                                tggtgACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAGCCGTGCCCCGGTAAAATGa                                                         <  2:944427/93‑1 (MQ=255)

                                tggtgACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGa                                                         >  1:4998081/1‑93 (MQ=255)

                                 ggtgACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGAc                                                        >  1:6903033/1‑93 (MQ=255)

                                    gACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAg                                                     <  1:4196588/93‑1 (MQ=255)

                                    gACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAg                                                     <  1:4583268/93‑1 (MQ=255)

                                    gACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAg                                                     <  2:5108654/93‑1 (MQ=255)

                                     aCTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTCAAATGACGAGc                                                    >  2:4644257/1‑93 (MQ=255)

                                        gAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGcatc                                                 <  1:1157180/93‑1 (MQ=255)

                                         aGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGcatca                                                >  2:7493101/1‑93 (MQ=255)

                                         aGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGcatca                                                <  1:610539/93‑1 (MQ=255)

                                         aGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGcatca                                                >  1:9850946/1‑93 (MQ=255)

                                            gggTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTc                                             <  2:2398740/93‑1 (MQ=255)

                                            gggTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTc                                             <  2:2912026/93‑1 (MQ=255)

                                              gTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAg                                           <  2:4411091/93‑1 (MQ=255)

                                               ttttCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAgg                                          >  2:3986856/1‑93 (MQ=255)

                                                   cAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGACCCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGa                                      <  1:4146425/93‑1 (MQ=255)

                                                   cAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGa                                      <  2:7890352/93‑1 (MQ=255)

                                                   cAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGa                                      <  1:4418145/93‑1 (MQ=255)

                                                    aaaCGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGAc                                     <  2:5714934/93‑1 (MQ=255)

                                                     aaCGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACa                                    >  1:9632085/1‑93 (MQ=255)

                                                       cGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACaaa                                  <  1:3668336/93‑1 (MQ=255)

                                                        gCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACaaaa                                 <  1:2076947/93‑1 (MQ=255)

                                                        cccAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACaaaa                                 <  2:8581833/92‑1 (MQ=255)

                                                         ccAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAAt                                >  1:2566836/1‑93 (MQ=255)

                                                         ccAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAAt                                <  2:2683192/93‑1 (MQ=255)

                                                          cAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATg                               >  1:9494255/1‑93 (MQ=255)

                                                          cAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATg                               <  2:4889643/93‑1 (MQ=255)

                                                           aGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGt                              >  1:8261725/1‑93 (MQ=255)

                                                            gCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGtt                             <  2:3873678/93‑1 (MQ=255)

                                                             cTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTc                            <  2:1246519/93‑1 (MQ=255)

                                                             cTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTc                            >  1:3538984/1‑93 (MQ=255)

                                                               tGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGa                          <  1:1763779/93‑1 (MQ=255)

                                                               tGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGa                          <  2:8841998/93‑1 (MQ=255)

                                                                  tatGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCa                       >  2:4742025/1‑93 (MQ=255)

                                                                   atGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCAc                      <  2:3224060/93‑1 (MQ=255)

                                                                    tgctgcAAGTTGGCATTCTCTGCGACGTTGATAGTTAACCGTGCCCCGGTAAAATGACTGGGATCATTCCTGCTGTCAAAATGTTCTATCaac                     >  2:9218368/1‑91 (MQ=255)

                                                                    tgctgcAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCAcc                     <  1:6263285/93‑1 (MQ=255)

                                                                    tgctgcAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCAcc                     <  1:3674507/93‑1 (MQ=255)

                                                                     gctgcAAGTGGGCATTCGCTGTGACGTTGATAGTGATCCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCg                    <  1:1649014/93‑1 (MQ=255)

                                                                       tgcAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGtt                  >  2:6070244/1‑93 (MQ=255)

                                                                       tgcAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGtt                  <  2:7839643/93‑1 (MQ=255)

                                                                        gcAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTg                 >  1:8042023/1‑93 (MQ=255)

                                                                         cAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGc                >  1:772056/1‑93 (MQ=255)

                                                                         cAAGTGGGCATTCGCTGGGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGc                <  1:8694598/93‑1 (MQ=255)

                                                                          aaGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCt               >  1:9139261/1‑93 (MQ=255)

                                                                          aaGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGAACCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCAACATTggt               >  2:1373635/1‑91 (MQ=255)

                                                                           aGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCtt              >  2:5935930/1‑93 (MQ=255)

                                                                           aGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCtt              >  2:396745/1‑93 (MQ=255)

                                                                            gTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTc             >  1:1114244/1‑93 (MQ=255)

                                                                            gTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTc             >  1:4753304/1‑93 (MQ=255)

                                                                             tGGGCATTCGCTGTGACGTTGATCGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCg            <  2:5531640/93‑1 (MQ=255)

                                                                             tGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCg            >  1:6142116/1‑93 (MQ=255)

                                                                             tGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCg            <  2:1962019/93‑1 (MQ=255)

                                                                              gggCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCgg           >  2:8481806/1‑93 (MQ=255)

                                                                               ggCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGc          <  2:10039803/93‑1 (MQ=255)

                                                                                gCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCa         <  2:7405194/93‑1 (MQ=255)

                                                                                gCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCa         <  1:266377/93‑1 (MQ=255)

                                                                                 cATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCAc        <  2:1091074/93‑1 (MQ=255)

                                                                                 cATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCAc        <  1:7938520/93‑1 (MQ=255)

                                                                                   ttCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCt      >  1:9378416/1‑93 (MQ=255)

                                                                                   ttCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCt      >  2:8935342/1‑93 (MQ=255)

                                                                                     cGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTc    <  1:3772523/93‑1 (MQ=255)

                                                                                     cGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTc    <  1:8400244/93‑1 (MQ=255)

                                                                                     cGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTc    <  2:5384865/93‑1 (MQ=255)

                                                                                       cTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCg  <  1:4043618/93‑1 (MQ=255)

                                                                                       cTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCg  >  2:8686895/1‑93 (MQ=255)

                                                                                       cTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCg  >  1:1835914/1‑93 (MQ=255)

CCTCAGCCAGCAACAAATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGCGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCG  >  NC_000913/1759104‑1759283

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`