Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,771,671 T→C L379P (CTG→CCG)  b1691 → putative amino acid/amine transport protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,771,6710TC92.1% 823.0 / 48.4 305L379P (CTG→CCG) b1691putative amino acid/amine transport protein
Reads supporting (aligned to +/- strand):  ref base T (10/14);  new base C (155/126);  total (165/140)
Fisher's exact test for biased strand distribution p-value = 2.10e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.49e-01

Only 100 of 329 total aligned reads displayed.

GACTGGCTAACTTTGTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCTGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCGGTTTGGCGAGCGTAAAT  >  NC_000913/1771581‑1771763
                                                                                          |                                                                                            
gACTGGCTAACTTTGTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGcgccgc                                                                                            >  1:8500740/1‑93 (MQ=255)
 aCTGGCTAACTTTGTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCgccgct                                                                                           >  1:2796317/1‑93 (MQ=255)
 aCTGGCTAACTTTGTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCgccgct                                                                                           >  2:5787966/1‑93 (MQ=255)
  cTGGCTAACTTTGTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGccgctg                                                                                          <  2:7918187/93‑1 (MQ=255)
   tGGCTAACTTTGTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGccgctgc                                                                                         >  1:5609561/1‑92 (MQ=255)
      cTAACTTTGTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGccc                                                                                      <  1:5297518/93‑1 (MQ=255)
       tAACTTTGTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCTGCTGGCCCt                                                                                     <  2:1105715/93‑1 (MQ=255)
         aCTTTGTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGa                                                                                   <  2:1813846/93‑1 (MQ=255)
          cTTTGTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCTGCTGGCCCTGAt                                                                                  <  2:2403154/93‑1 (MQ=255)
           tttGTTATTCCTCTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGAtt                                                                                 <  2:2758864/93‑1 (MQ=255)
           tttGTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCTGCTGGCCCTGAtt                                                                                 <  1:9030779/93‑1 (MQ=255)
           tttGTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGAtt                                                                                 <  2:7492317/93‑1 (MQ=255)
              gTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTAcc                                                                              <  2:3985458/93‑1 (MQ=255)
                  ttCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTCCTTTCGCGCCGCTGGCCCTGATTACCGCaa                                                                          <  1:3533910/93‑1 (MQ=255)
                  ttCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCaa                                                                          >  2:3160192/1‑93 (MQ=255)
                   tCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAat                                                                         <  1:7146359/93‑1 (MQ=255)
                   tCCACTGATTACCGGTTATCTGTCGAACATCGGACTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAat                                                                         <  1:939488/93‑1 (MQ=255)
                      ccTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAattat                                                                      <  1:1883821/92‑1 (MQ=255)
                      aCTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAattat                                                                      >  2:9079181/1‑93 (MQ=255)
                       cTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCTGCTGGCCCTGATTACCGCAattatt                                                                     <  1:8784049/93‑1 (MQ=255)
                       cTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAattatt                                                                     >  2:9455286/1‑93 (MQ=255)
                        tGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTg                                                                    >  1:7694783/1‑93 (MQ=255)
                         gATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGt                                                                   >  2:9734995/1‑93 (MQ=255)
                         gATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGt                                                                   >  1:9888018/1‑93 (MQ=255)
                         gATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGt                                                                   >  2:2165897/1‑93 (MQ=255)
                          aTTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGtt                                                                  >  2:841306/1‑93 (MQ=255)
                           ttACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGttt                                                                 <  1:747764/93‑1 (MQ=255)
                             aCCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCTGCTGGCCCTGATTACCGCAATTATTGttttt                                                               <  2:1589217/93‑1 (MQ=255)
                              ccGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTGCCGCAATTATTGTTTTTa                                                              <  1:627438/93‑1 (MQ=255)
                              ccGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTa                                                              <  2:5337430/93‑1 (MQ=255)
                              ccGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTa                                                              >  1:1562438/1‑93 (MQ=255)
                              ccGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTa                                                              >  1:6703960/1‑93 (MQ=255)
                               cGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTAt                                                             >  1:7956993/1‑93 (MQ=255)
                                ggTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATc                                                            >  1:2163615/1‑93 (MQ=255)
                                 gTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATcc                                                           >  1:1158033/1‑93 (MQ=255)
                                  ttATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCg                                                          <  2:4248872/93‑1 (MQ=255)
                                   tATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTGGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGc                                                         <  1:5110193/93‑1 (MQ=255)
                                   tATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGc                                                         >  1:5876039/1‑93 (MQ=255)
                                    aTCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCgat                                                        >  2:5198397/1‑91 (MQ=255)
                                    aTCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCt                                                        >  1:9842299/1‑93 (MQ=255)
                                    aTCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCt                                                        <  1:4754214/93‑1 (MQ=255)
                                     tCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTa                                                       >  2:3329233/1‑93 (MQ=255)
                                      cTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTAt                                                      >  2:9536122/1‑93 (MQ=255)
                                        gTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTa                                                    >  2:6717487/1‑93 (MQ=255)
                                        gTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTa                                                    >  2:431740/1‑93 (MQ=255)
                                        gTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGACCCTGATTACCGCAATTATTGTTTTTATCCGCTATTa                                                    <  1:4478907/93‑1 (MQ=255)
                                         tCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTAc                                                   >  2:7025941/1‑93 (MQ=255)
                                          cGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTAcc                                                  >  2:4064335/1‑93 (MQ=255)
                                          cGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTAcc                                                  <  2:3746596/93‑1 (MQ=255)
                                          cGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTAcc                                                  <  2:7644526/93‑1 (MQ=255)
                                             aCATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACcgcg                                               >  2:6632357/1‑93 (MQ=255)
                                              cATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGt                                              <  2:440472/93‑1 (MQ=255)
                                               aTCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGtt                                             <  1:206912/93‑1 (MQ=255)
                                               aTCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGtt                                             <  1:9648149/93‑1 (MQ=255)
                                                tCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCTGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGttt                                            >  2:2244711/1‑93 (MQ=255)
                                                  ggCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTc                                          >  1:5479638/1‑93 (MQ=255)
                                                  ggCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTc                                          >  2:2104150/1‑93 (MQ=255)
                                                   gCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCa                                         >  1:9958476/1‑93 (MQ=255)
                                                   gCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCa                                         <  1:7402926/93‑1 (MQ=255)
                                                    ccTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCat                                        >  1:4010684/1‑93 (MQ=255)
                                                     cTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCatt                                       >  1:121141/1‑93 (MQ=255)
                                                      tGCAATATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCattt                                      >  1:8057106/1‑92 (MQ=255)
                                                      tGCAATATATCATTGTTCTCGATTTTACTTTCCCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTCTTCCCGCGTTTttatta                                      >  1:2423936/1‑93 (MQ=255)
                                                         aaTATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTc                                   >  2:61708/1‑93 (MQ=255)
                                                         aaTATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTc                                   >  2:102676/1‑93 (MQ=255)
                                                         aaTATATCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTc                                   <  1:2507181/93‑1 (MQ=255)
                                                          atatatCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTcc                                  >  1:10023013/1‑93 (MQ=255)
                                                           tatatCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCt                                 >  1:5972299/1‑93 (MQ=255)
                                                           tatatCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCt                                 <  2:8834403/93‑1 (MQ=255)
                                                             tatCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGa                               >  1:497713/1‑93 (MQ=255)
                                                             tatCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGa                               >  2:4903552/1‑93 (MQ=255)
                                                               tCATTGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGaaa                             >  2:3116213/1‑93 (MQ=255)
                                                                   tGTTCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCTTAAAatgat                        >  1:5757881/1‑93 (MQ=255)
                                                                    gTTCTCGATTTTACTTTCGCGCCTCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAatgat                        <  2:5525089/93‑1 (MQ=255)
                                                                     ttCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAatgatg                       >  1:4640670/1‑93 (MQ=255)
                                                                     ttCTCGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAatgatg                       <  1:8950901/93‑1 (MQ=255)
                                                                      tctcGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGAtgt                      <  2:2630972/93‑1 (MQ=255)
                                                                       ctcGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGAtgtg                     <  1:3477110/93‑1 (MQ=255)
                                                                       ctcGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGAtgtg                     >  1:917766/1‑93 (MQ=255)
                                                                        tcGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGc                    >  1:9497237/1‑93 (MQ=255)
                                                                        tcGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGc                    <  1:2926732/93‑1 (MQ=255)
                                                                        tcGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGc                    >  1:180037/1‑93 (MQ=255)
                                                                        tcGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGc                    >  1:6101544/1‑93 (MQ=255)
                                                                         cGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCTTTTTCATTATTCCTGAAAATGATGTGCg                   <  1:334234/93‑1 (MQ=255)
                                                                         cGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCg                   <  2:1365350/93‑1 (MQ=255)
                                                                         cGATTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCg                   >  1:6547691/1‑93 (MQ=255)
                                                                          gATTCTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACACCGTTTTCATTATTCCTGAAAATGAtgtctgg                  >  1:7186883/1‑89 (MQ=255)
                                                                           aTTTTACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCGGt                 <  1:3602366/93‑1 (MQ=255)
                                                                            ttttACTTTCGCGCTGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCggct                <  2:4551892/93‑3 (MQ=255)
                                                                            ttttACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCGGtt                >  2:4990813/1‑93 (MQ=255)
                                                                             tttACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCGGttt               >  1:1739321/1‑93 (MQ=255)
                                                                              ttACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCGGTTTg              <  1:3206792/93‑1 (MQ=255)
                                                                               tACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCGGTTTgg             >  2:5033206/1‑93 (MQ=255)
                                                                               tACTTTCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCGGTTTgg             <  2:6414541/93‑1 (MQ=255)
                                                                                  tttCGCGCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCGGTTTGGCGa          <  1:6403882/93‑1 (MQ=255)
                                                                                     cgcgCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCGGTTTGGCGAGCg       >  2:8631530/1‑93 (MQ=255)
                                                                                     cgcgCCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCGGTTTGGCGAGCg       <  1:196546/93‑1 (MQ=255)
                                                                                      gcgcCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCGGTTTGGCGAGCGt      >  1:3765308/1‑93 (MQ=255)
                                                                                      gcgcCGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCGGTTTGGCGAGCGt      >  2:5482104/1‑93 (MQ=255)
                                                                                          tgctgGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGACAATGATGTGCGGTTTGGCGAGCGTACAt  >  1:6639788/1‑93 (MQ=255)
                                                                                          |                                                                                            
GACTGGCTAACTTTGTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCTGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCGGTTTGGCGAGCGTAAAT  >  NC_000913/1771581‑1771763

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: