BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,779,044	A→G	Q207R (CAG→CGG)	ydiR →	putative flavoprotein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,779,044	0	A	G	99.3%	461.1 / ‑5.0	147	Q207R (CAG→CGG)	ydiR	putative flavoprotein
Reads supporting (aligned to +/- strand): ref base A (1/0); new base G (68/78); total (69/78)
Fisher's exact test for biased strand distribution p-value = 4.69e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 160 total aligned reads displayed.

TCTGTCGCGAACGCCGTGCGAAAGCCGCAAGCAGCGTGGACCTGAGCAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCAGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGCGAGAACTGGA  >  NC_000913/1778954‑1779133

 ctGTCGCGAACGCCGTGCGAAAGCCGCAAGCAGCGTGGACGTGAGTAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCGGGa                                                                                        <  2:3800021/93‑1 (MQ=255)

 ctGTCGCGAACGCCGTGCGAAAGCCGCAAGCAGCGTGGACCTGAGCAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCGGGa                                                                                        >  1:7974541/1‑93 (MQ=255)

  tGTCGCGAACGCCGTGCGAAAGCCGCAAGCAGCGTGGACCTGAGCAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCGGGag                                                                                       >  1:3809138/1‑92 (MQ=255)

  tGTCGCGAACGCCGTGCGAAAGCCGCAAGCAGCGTGGACCTGAGCAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCGGGAt                                                                                       <  2:4255543/93‑1 (MQ=255)

  tGTCGCGAACGCCGTGCGAAAGCCGCAAGCAGCGTGGACCTGAGCAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCGGGAt                                                                                       <  2:8084050/93‑1 (MQ=255)

   gTCGCGAACGCCGTGCGAAAGCCGCAAGCAGCGTGGACCTGAGCAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCGGGATg                                                                                      <  2:4402869/93‑1 (MQ=255)

    tCGCGAACGCCGTGCGAAAGCCGCAAGCAGCGTGGACCTGAGCAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGGGCGGGATGa                                                                                     >  2:6401443/1‑93 (MQ=255)

     cgcgAACGCCGTGCGAAAGCCGCAAGCAGCGTGGACCTGAGCAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCGGGATGAc                                                                                    <  1:1444681/93‑1 (MQ=255)

       cgAACGCCGTGCGAAAGCCGCAAGCAGCGTGGACCTGAGCAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCGGGATGACCt                                                                                  >  2:9331068/1‑93 (MQ=255)

          aCGCCGTGCGAAAGCCGCAAGCAGCGTGGACCTGAGCAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCGGGATGACCTaaa                                                                               <  1:4988521/93‑1 (MQ=255)

            gCCGTGCGAAAGCCGCAAGCAGCGTGGACCTGAGCAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCGGGATGACCGaaaaa                                                                             >  2:4201009/1‑93 (MQ=255)

             ccGTGCGAAAGCCGCAAGCAGCGTGGACCTGAGCAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCGGGATGACCTAAAAAt                                                                            >  2:9571892/1‑93 (MQ=255)

                tGCGAAAGCCGCAAGCAGCGTGGACCTGAGCAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCGGGATGACCTAAAAATgtt                                                                         >  1:1615233/1‑91 (MQ=255)

                tGCGAAAGCCGCAAGCAGCGTGGACCTGAGCAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCGGGATGACCTAAAAATGGt                                                                         >  2:5979883/1‑93 (MQ=255)

                 gCGAAAGCCGCAAGCAGCGTGGACCTGAGCAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCGGGATGACCTAAAAATGGTc                                                                        <  1:1624315/93‑1 (MQ=255)

                  cGAAAGCCGCAAGCAGCGTGGACCTGAGCAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCGGGATGACCTAAAAATGGTcc                                                                       >  1:4161105/1‑93 (MQ=255)

                   gAAAGCCGCAAGCAGCGTGGACCTGAGCAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCGGGATGACCTAAAAATGGTCCa                                                                      <  1:2976220/93‑1 (MQ=255)

                   gAAAGCCGCAAGCAGCGTGGACCTGAGCAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCGGGATGACCTAAAAATGGTCCa                                                                      <  2:8738185/93‑1 (MQ=255)

                     aaGCCGCAAGCAGCGTGGACCTGAGCAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCGGGATGACCTAAAAATGGTCCACg                                                                    <  1:1556974/93‑1 (MQ=255)

                         cGCAAGCAGCGTGGACCTGAGCAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGGGCGGCTTGACCTAAAAATGGCCGACGAACt                                                                >  2:6176496/1‑93 (MQ=255)

                         cGCAAGCAGCGTGGACCTGAGCAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCGGGATGACCTAAAAATGGTCCACGAACt                                                                <  2:7619123/93‑1 (MQ=255)

                         cGCAAGCAGCGTGGACCTGAGCAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCGGGATGACCTAAAAATGGTCCACGAACt                                                                >  1:8575169/1‑93 (MQ=255)

                         cGCAAGCAGCGTGGACCTGAGCAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCGGGATGACCTAAAAATGGTCCACGAACt                                                                >  1:8575167/1‑93 (MQ=255)

                          gCAAGCAGCGTGGACCTGAGCAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCGGGATGACCTAAAAATGGTCCACGAACTg                                                               <  2:9900897/93‑1 (MQ=255)

                           cAAGCAGCGTGGACCTGAGCAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCGGGATGACCTAAAAATGGTCCACGAACTgg                                                              <  1:2988139/93‑1 (MQ=255)

                             agccgcGTGGACCTGAGCAAAGCAAAGCGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCGGGATGACCTAAAAATGGTCCACGAACTggcg                                                            <  2:7677912/93‑1 (MQ=255)

                             agcagcGTGGACCTGAGCAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCGGGATGACCTAAAAATGGTCCACGAACTggcg                                                            >  1:1978120/1‑93 (MQ=255)

                               cagcGTGGACCTGAGCAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCGGGATGACCTAAAAATGGTCCACGAACTggcggc                                                          <  1:4615530/93‑1 (MQ=255)

                               cagcGTGGACCTGAGCAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCGGGATGACCTAAAAATGGTCCACGAACTggcggc                                                          <  2:7349872/93‑1 (MQ=255)

                                agcGTGGACCTGAGCAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCGGGATGACCTAAAAATGGTCCACGAACTGgcggcg                                                         >  1:733911/1‑93 (MQ=255)

                                    tGGACCTGAGCAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCGGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGtgc                                                     <  1:911332/93‑1 (MQ=255)

                                       gccTGAGCAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCGGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGtgctga                                                  <  2:6343683/92‑1 (MQ=255)

                                       aCCTGAGCAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCGGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGtgctga                                                  >  1:9056851/1‑93 (MQ=255)

                                        ccTGAGCAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCGGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGtgctgaa                                                 <  1:2459983/93‑1 (MQ=255)

                                        ccTGAGCAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCGGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGtgctgaa                                                 <  1:5799029/93‑1 (MQ=255)

                                         cTGAGCAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCGGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGtgctgaat                                                <  2:9448992/93‑1 (MQ=255)

                                         cTGAGCAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCGGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGtgctgaat                                                <  1:9866912/93‑1 (MQ=255)

                                         cTGAGCAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCGGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGtgctgaat                                                >  1:5923480/1‑93 (MQ=255)

                                         cTGAGCAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCGGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGtgctgaat                                                <  1:3915731/93‑1 (MQ=255)

                                          tGAGCAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCGGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGtgctgaatg                                               >  2:2509933/1‑93 (MQ=255)

                                          tGAGCAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCAGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGcgctgaatg                                               >  1:7880058/1‑93 (MQ=255)

                                            agcaaagcaaAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCGGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGtgctgaatgct                                             >  2:7168679/1‑93 (MQ=255)

                                              caaagcaaaACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCGGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGtgctgaatgctga                                           <  2:2303799/93‑1 (MQ=255)

                                               aaagcaaaACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCGGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGtgctgaatgctgaa                                          >  1:412778/1‑93 (MQ=255)

                                               aaagcaaaACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCGGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGtgctgaatgctgaa                                          <  1:2712241/93‑1 (MQ=255)

                                               aaagcaaaACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCGGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGtgctgaatgctgaa                                          >  2:9403257/1‑93 (MQ=255)

                                               aaagcaaaACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCGGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGtgctgaatgctgaa                                          >  1:6999946/1‑93 (MQ=255)

                                               aaagcaaaACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCGGGAGGACCTAAAAATGGTCAACGACCTGGCGGCGGggctgaaggctgag                                          >  1:2317242/1‑92 (MQ=255)

                                                aagcaaaACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCGGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAg                                         >  2:4783353/1‑93 (MQ=255)

                                                aagcaaaACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCGGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAg                                         >  2:1688156/1‑93 (MQ=255)

                                                aagcaaaACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCGGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAg                                         <  1:9103549/93‑1 (MQ=255)

                                                 agcaaaACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCGGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGt                                        <  2:10025177/93‑1 (MQ=255)

                                                  gcaaaACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCGGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTc                                       >  1:2387040/1‑93 (MQ=255)

                                                   caaaACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCGGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCg                                      >  2:3474096/1‑93 (MQ=255)

                                                    aaaaCGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCGGGATGACCTAAAAATGGTCCCCGAACTGGCGGCGGTGCTGAATGCTGAAGTCgg                                     >  1:9703292/1‑93 (MQ=255)

                                                    aaaaCGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCGGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCgg                                     >  2:6535441/1‑93 (MQ=255)

                                                    aaaaCGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCGGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCgg                                     >  1:2727506/1‑93 (MQ=255)

                                                        cGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCGGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGt                                 >  2:2007584/1‑93 (MQ=255)

                                                        cGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCGGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGt                                 <  1:2372425/93‑1 (MQ=255)

                                                         gtgtGGTTGGCGTCGGTCGTGGACTGGCGGCGCGGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGtt                                >  2:6789166/1‑93 (MQ=255)

                                                         gtgtGGTTGGCGTCGGTCGTGGACTGGCGGCGCGGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGtt                                <  1:8791006/93‑1 (MQ=255)

                                                           gtgGTTGGCGTCGGTCGTGGACTGGCGGCGCGGGATCACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCa                              <  2:10046482/93‑1 (MQ=255)

                                                            tgGTTGGCGTCGGTCGTGGACTGGCGGCGCGGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCag                             >  1:723044/1‑92 (MQ=255)

                                                            tgGTTGGCGTCGGTCGTGGACTGGCGGCGCGGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCAc                             <  1:2130300/93‑1 (MQ=255)

                                                              gTTGGCGTCGGTCGTGGACTGGCGGCGCGGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGt                           <  1:502013/93‑1 (MQ=255)

                                                               ttGGCGTCGGTCGTGGACTGGCGGCGCGGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGGATGCTGAAGTCGGCTGTTGACGTc                          >  1:5514793/1‑93 (MQ=255)

                                                               ttGGCGTCGGTCGTGGACTGGCGGCGCGGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTc                          >  1:10005533/1‑93 (MQ=255)

                                                                 ggCGTCGGTCGTGGACTGGCGGCGCGGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCa                        <  1:5737400/93‑1 (MQ=255)

                                                                   cGTCGGTCGTGGACTGGCGGCGCGGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAAt                      <  1:4510089/93‑1 (MQ=255)

                                                                    gtcggtcgTGGACTGGCGGCGCGGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTGACGTCCCAtt                     >  2:2831268/1‑93 (MQ=255)

                                                                    gtcggtcgTGGACTGGCGGCGCGGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAAtt                     <  1:5979884/93‑1 (MQ=255)

                                                                    gtcggtcgTGGACTGGCGGCGCGGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAAtt                     <  2:8916718/93‑1 (MQ=255)

                                                                     tcggtcgTGGACTGGCGGCGCGGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCCATTg                    >  1:10021877/1‑93 (MQ=255)

                                                                     tcggtcgTGGACTGGCGGCGCGGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAAttc                    >  1:2240927/1‑92 (MQ=255)

                                                                     tcggtcgTGGACTGGCGGCGCGGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTg                    >  2:4595496/1‑93 (MQ=255)

                                                                     tcggtcgTGGACTGGCGGCGCGGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTg                    <  2:7930015/93‑1 (MQ=255)

                                                                     tcggtcgTGGACTGGCGGCGCGGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTg                    >  1:7666772/1‑93 (MQ=255)

                                                                       ggtcgTGGACTGGCGGCGCGGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGcc                  <  1:8851376/93‑1 (MQ=255)

                                                                       ggtcgTGGACTGGCGGCGCGGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGcc                  <  2:9043570/93‑1 (MQ=255)

                                                                        gtcgTGGACTGGCGGCGCGGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCg                 >  1:6676167/1‑93 (MQ=255)

                                                                        gtcgTGGACTGGCGGCGCGGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCg                 >  1:8371172/1‑93 (MQ=255)

                                                                          cgTGGACTGGCGGCGCGGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCTGCTGTTCACGTCCAATTGCCCaa               >  2:5318215/1‑93 (MQ=255)

                                                                           gTGGACTGGCGGCGCGGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAg              <  2:5407559/93‑1 (MQ=255)

                                                                           gTGGACTGGCGGCGCGGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAg              >  1:8097634/1‑93 (MQ=255)

                                                                           gTGGACTGGCGGCGCGGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAg              >  1:8097635/1‑93 (MQ=255)

                                                                              gACTGGCGGCGCGGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGCg           >  2:7181512/1‑93 (MQ=255)

                                                                               aCTGGCGGCGCGGGATGACCTAACAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGCga          <  2:5497260/93‑1 (MQ=255)

                                                                               aCTGGCGGCGCGGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGCga          <  1:7301598/93‑1 (MQ=255)

                                                                                cTGGCGGCGCGCGATTACCTAAAAAGGGTCCACAAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGCgag         <  2:3962228/93‑1 (MQ=255)

                                                                                 tGGCGGCGCGGGATGACCTAAACATGGTCCACGAACTGGCGGCGGAGCTGAATGCTGAAGTCGGCTGTTCACGACCAATTGCAGAAGGCgagt        <  1:8944017/93‑2 (MQ=255)

                                                                                 gggcggcGCGGGATGACCTAAAAATGGTCCACGACCTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGCgaga        <  2:8407034/92‑1 (MQ=255)

                                                                                   gcggcgCGGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGCGAGAAc      >  2:636169/1‑93 (MQ=255)

                                                                                   gcggcgCGGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGCGAGAAc      <  1:9174975/93‑1 (MQ=255)

                                                                                    cggcgCGGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGCGAGAACt     <  1:34297/93‑1 (MQ=255)

                                                                                     ggcgCGGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGCGAGAACtg    <  1:1264437/93‑1 (MQ=255)

                                                                                     ggcgCGGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGCGAGAACtg    <  1:4566208/93‑1 (MQ=255)

                                                                                      gcgcGGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGCGAGAACtgg   >  1:2001653/1‑93 (MQ=255)

                                                                                      gcgcGGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGCGAGAACtgg   >  1:9881113/1‑93 (MQ=255)

                                                                                       cgcgGGATGACCTATAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCCCGTCCAATTGCCGAAGGCGAGAACtgga  <  2:8660700/93‑1 (MQ=255)

                                                                                       cgcgGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGCGAGAACtgga  <  2:9512371/93‑1 (MQ=255)

TCTGTCGCGAACGCCGTGCGAAAGCCGCAAGCAGCGTGGACCTGAGCAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCAGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGCGAGAACTGGA  >  NC_000913/1778954‑1779133

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`