Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,787,410 A→G T318A (ACT→GCT)  aroH → 3‑deoxy‑D‑arabinoheptulosonate‑7‑phosphate synthase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,787,4100AG99.4% 531.8 / ‑5.1 167T318A (ACT→GCT) aroH3‑deoxy‑D‑arabinoheptulosonate‑7‑phosphate synthase
Reads supporting (aligned to +/- strand):  ref base A (0/1);  new base G (65/101);  total (65/102)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.59e-01

Only 100 of 187 total aligned reads displayed.

ATCCGCAATGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCACTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGTAGATACCCGC  >  NC_000913/1787320‑1787499
                                                                                          |                                                                                         
aTCCGCAATGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCcgctcgct                                                                                         <  2:8757114/93‑1 (MQ=255)
aTCCGCAATGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCcgctcgct                                                                                         <  2:4435048/93‑1 (MQ=255)
aTCCGCAATGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCcgctcgct                                                                                         >  2:1826849/1‑93 (MQ=255)
aTCCGCAATGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCcgctcgct                                                                                         >  1:2243058/1‑93 (MQ=255)
aTCCGCAATGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCcgctcgct                                                                                         <  2:8062203/93‑1 (MQ=255)
aTCCGCAATGGCTCTACGGCGATTGCTGGAATTAGGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCcgctcgct                                                                                         <  2:4435045/93‑1 (MQ=255)
 tCCGCAATGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCtt                                                                                        >  1:8679211/1‑93 (MQ=255)
  ccGCAATGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTa                                                                                       <  1:9350186/93‑1 (MQ=255)
  ccGCAATGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTa                                                                                       <  1:3353135/93‑1 (MQ=255)
  ccGCAATGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTa                                                                                       <  1:5274725/93‑1 (MQ=255)
    gaaaTGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACg                                                                                     <  2:5285194/91‑1 (MQ=255)
    gCAATGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACg                                                                                     >  2:4520492/1‑93 (MQ=255)
     cAATGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACgg                                                                                    >  2:4975364/1‑93 (MQ=255)
      aaTGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGt                                                                                   <  1:7416212/93‑1 (MQ=255)
       aTGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTc                                                                                  >  1:2618126/1‑93 (MQ=255)
       aTGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTc                                                                                  >  1:6615916/1‑93 (MQ=255)
        tGGCTCTACGGCGATTGCTGGAATTATGGCGGACAGTTTTCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCa                                                                                 >  1:9016395/1‑93 (MQ=255)
        tGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCa                                                                                 >  1:6409815/1‑93 (MQ=255)
          gCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTAGGGTCAAt                                                                               >  1:4811118/1‑93 (MQ=255)
          gCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAAt                                                                               <  2:7824980/93‑1 (MQ=255)
           ctctACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATc                                                                              <  2:5773174/93‑1 (MQ=255)
           ctctACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATc                                                                              <  2:5102019/93‑1 (MQ=255)
           ctctACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATc                                                                              <  2:731365/93‑1 (MQ=255)
           ctctACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTAAGCCGCTCGCTTACGGTCAATc                                                                              >  2:2436106/1‑93 (MQ=255)
            tctACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATcc                                                                             >  1:926778/1‑93 (MQ=255)
             ctACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCa                                                                            >  1:9328039/1‑93 (MQ=255)
             ctACGGAGATTGATGGAATAATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATACa                                                                            <  2:8963175/93‑1 (MQ=255)
              tACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCAt                                                                           <  1:3173171/93‑1 (MQ=255)
              tACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCAt                                                                           >  2:6668006/1‑93 (MQ=255)
              tACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCAt                                                                           >  2:4461608/1‑93 (MQ=255)
               aCGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCAtt                                                                          >  1:6744596/1‑93 (MQ=255)
                cGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTa                                                                         <  1:7812013/93‑1 (MQ=255)
                cGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTa                                                                         <  2:6464761/93‑1 (MQ=255)
                cGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTa                                                                         <  2:8787360/93‑1 (MQ=255)
                 ggCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTAc                                                                        >  1:7704573/1‑93 (MQ=255)
                 ggCGATTGCTGGAATTATGGCGGAAAGTTTCCTCGGCGAAGGAACGCAAAAAATCGTGGGCAGTCAGCCGTCCGCTTACGGTCAATCCATTAc                                                                        <  1:1794434/93‑1 (MQ=255)
                  gCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTAcc                                                                       <  1:463500/93‑1 (MQ=255)
                    gATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGa                                                                     >  2:8869571/1‑93 (MQ=255)
                    gATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGa                                                                     <  2:6825981/93‑1 (MQ=255)
                    gATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGa                                                                     >  1:3196034/1‑93 (MQ=255)
                     aTTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGAc                                                                    >  2:3708540/1‑93 (MQ=255)
                         cTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTATGGTCAATCCATTACCGACCCgt                                                                <  2:9012566/93‑1 (MQ=255)
                         cTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCgt                                                                >  2:7100569/1‑93 (MQ=255)
                         cTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCgt                                                                <  2:8256123/93‑1 (MQ=255)
                          tGGAATTATGGCGGAAAGTTTCCTGCGCGACGGAACGCAAAAAATCGTCGGCAGTAAGCCGCTCGCTTACGGTCAATCCATTACCGACCCgtc                                                               >  1:8107873/1‑92 (MQ=255)
                          gggAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCACGCTTACGGTCAATCCATTACCGACCCgtg                                                               <  2:5761884/92‑1 (MQ=255)
                           ggAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCgtgt                                                              >  2:7794285/1‑93 (MQ=255)
                           ggAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCgtgt                                                              <  2:4078636/93‑1 (MQ=255)
                            gAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTc                                                             <  1:987828/93‑1 (MQ=255)
                              aTTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTATCGACCCGTGTctg                                                           >  2:6585499/1‑93 (MQ=255)
                                tATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTctggg                                                         >  1:9612012/1‑93 (MQ=255)
                                tATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTctggg                                                         >  1:8494431/1‑93 (MQ=255)
                                 aTGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTctgggc                                                        <  1:276666/93‑1 (MQ=255)
                                 aTGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTctgggc                                                        <  2:202052/93‑1 (MQ=255)
                                  tGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTctgggct                                                       <  2:7533796/93‑1 (MQ=255)
                                   ggCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTctgggctg                                                      <  1:3704300/93‑1 (MQ=255)
                                       gAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGggag                                                  >  1:9501345/1‑93 (MQ=255)
                                        aaaGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGggagg                                                 <  1:2080513/93‑1 (MQ=255)
                                         aaatttCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGggagga                                                <  1:3623067/90‑1 (MQ=255)
                                         aaGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGggagga                                                <  2:1059636/93‑1 (MQ=255)
                                          aGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGAt                                               <  2:7847446/93‑1 (MQ=255)
                                          aGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGAt                                               <  1:7512018/93‑1 (MQ=255)
                                          aGTTGCCTGATCGAACGAACGGAAAAAATCGTCGGCAGCCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGAt                                               <  1:7512321/93‑1 (MQ=255)
                                            tttCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATAc                                             >  2:9749661/1‑93 (MQ=255)
                                             ttCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATAcc                                            >  2:94491/1‑93 (MQ=255)
                                               ccTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGa                                          >  2:2543357/1‑93 (MQ=255)
                                                cTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGaa                                         <  2:87144/93‑1 (MQ=255)
                                                cTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGaa                                         <  1:4437715/93‑1 (MQ=255)
                                                cTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGaa                                         <  2:5881428/93‑1 (MQ=255)
                                                 tGCGGGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAAc                                        <  2:7427571/93‑1 (MQ=255)
                                                     cgAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCt                                    <  1:9895256/93‑1 (MQ=255)
                                                         ggAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTc                                >  1:6808237/1‑93 (MQ=255)
                                                              gCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGaaaa                           <  1:8534001/93‑1 (MQ=255)
                                                               cAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGaaaaa                          <  2:778885/93‑1 (MQ=255)
                                                               cAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGaaaaa                          <  2:9308485/93‑1 (MQ=255)
                                                                aaaaaaTCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAAc                         <  1:5915170/93‑1 (MQ=255)
                                                                aaaaaaTCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAAc                         <  1:3438335/93‑1 (MQ=255)
                                                                  aaaaTCGTCGGCAGTCAGCCGCTCGCTTACGGTCATTCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTc                       <  2:5726981/93‑1 (MQ=255)
                                                                    aaTCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGc                     <  2:3558468/93‑1 (MQ=255)
                                                                      tcgtcgGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCct                   >  2:2580455/1‑93 (MQ=255)
                                                                      tcgtcgGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCct                   <  1:8714436/93‑1 (MQ=255)
                                                                       cgtcgGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCctc                  <  2:1403087/93‑1 (MQ=255)
                                                                       cgtcgGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCctc                  <  1:6286813/93‑1 (MQ=255)
                                                                       cgtcgCCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCctc                  <  2:2178514/93‑1 (MQ=255)
                                                                           ggCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCg              >  1:5826233/1‑93 (MQ=255)
                                                                            gCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCgg             >  2:2871626/1‑93 (MQ=255)
                                                                            gCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCgg             <  1:2032654/93‑1 (MQ=255)
                                                                             cAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGt            >  1:6550909/1‑93 (MQ=255)
                                                                               gTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGTAg          <  2:5481189/93‑1 (MQ=255)
                                                                                tCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGTAGa         <  2:8345054/93‑1 (MQ=255)
                                                                                 cAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGTAGAt        >  2:4633314/1‑93 (MQ=255)
                                                                                  aGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGTAGATa       <  2:1026549/93‑1 (MQ=255)
                                                                                  aGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGTAGATa       <  2:7958504/93‑1 (MQ=255)
                                                                                   gCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGTAGATAc      >  1:485775/1‑93 (MQ=255)
                                                                                     cgctcgctTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGTAGATAccc    <  1:5519673/93‑1 (MQ=255)
                                                                                     cgctcgctTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGTAGATAccc    >  1:3873996/1‑93 (MQ=255)
                                                                                     cgctcgctTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGTAGATAccc    <  1:1826849/93‑1 (MQ=255)
                                                                                      gCTCACTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGTAGATACCCg   <  2:9268800/93‑1 (MQ=255)
                                                                                       cTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGTAGATACCCGc  <  1:416419/93‑1 (MQ=255)
                                                                                       cTCCCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGTAGATACCCGc  <  1:7760653/93‑1 (MQ=255)
                                                                                          |                                                                                         
ATCCGCAATGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCACTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGTAGATACCCGC  >  NC_000913/1787320‑1787499

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑