Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,799,569 G→A N342N (AAC→AAT thrS ← threonine tRNA synthetase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,799,5690GA99.6% 1008.7 / ‑5.3 277N342N (AAC→AATthrSthreonine tRNA synthetase
Reads supporting (aligned to +/- strand):  ref base G (0/1);  new base A (116/160);  total (116/161)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.12e-01

Only 100 of 290 total aligned reads displayed.

GCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCTTTGTA  >  NC_000913/1799479‑1799658
                                                                                          |                                                                                         
   aTGCAGCGAACCTGACGGCTCGTTACGGGGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGaa                                                                                      >  1:6787798/1‑93 (MQ=255)
    tGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGaaa                                                                                     >  1:183040/1‑93 (MQ=255)
    tGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGaaa                                                                                     >  2:2307344/1‑93 (MQ=255)
    tGCAGCGAACCTGACGGCTCGTTACGGTGGAAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGCTAAGACTTCAGCCCCTGATTGaaa                                                                                     >  2:6890529/1‑93 (MQ=255)
     gCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGaaaa                                                                                    <  1:5959924/93‑1 (MQ=255)
      cAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAAt                                                                                   <  1:1135379/93‑1 (MQ=255)
       aGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAAtt                                                                                  <  1:6904586/93‑1 (MQ=255)
        gCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAAttt                                                                                 <  1:5874809/93‑1 (MQ=255)
         cGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTg                                                                                <  1:8551337/93‑1 (MQ=255)
           aaCCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTa                                                                              >  1:573238/1‑93 (MQ=255)
           aaCCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTa                                                                              <  1:6723925/93‑1 (MQ=255)
           aaCCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTa                                                                              <  2:5797386/93‑1 (MQ=255)
            aCCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTAc                                                                             >  2:5837717/1‑93 (MQ=255)
             ccTGACGGCTTGTTACGGGGGCCGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGtcgg                                                                            >  2:2650485/1‑90 (MQ=255)
             ccTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACg                                                                            <  1:4122098/93‑1 (MQ=255)
              cTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGt                                                                           >  1:6996282/1‑93 (MQ=255)
               tGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTg                                                                          >  1:1933405/1‑93 (MQ=255)
                gACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGa                                                                         >  1:349138/1‑93 (MQ=255)
                 aCGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGAc                                                                        <  2:1666601/93‑1 (MQ=255)
                  cGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGAcc                                                                       >  2:5693223/1‑93 (MQ=255)
                   ggCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGAccc                                                                      >  1:8123232/1‑93 (MQ=255)
                   ggCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGAccc                                                                      <  2:8388250/93‑1 (MQ=255)
                   ggCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGAccc                                                                      <  2:9850023/93‑1 (MQ=255)
                   ggCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGAccc                                                                      <  1:3715607/93‑1 (MQ=255)
                     cTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGGGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCgg                                                                    >  1:8032328/1‑93 (MQ=255)
                      tCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCggg                                                                   >  1:4911929/1‑93 (MQ=255)
                      tCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCggg                                                                   >  1:7062379/1‑93 (MQ=255)
                       cGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGc                                                                  >  2:8433697/1‑93 (MQ=255)
                        gTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCa                                                                 <  2:8249342/93‑1 (MQ=255)
                        gTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCa                                                                 <  2:338669/93‑1 (MQ=255)
                        gTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCa                                                                 <  1:7436790/93‑1 (MQ=255)
                         ttACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAg                                                                >  1:2063655/1‑93 (MQ=255)
                          tACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGt                                                               >  1:9599957/1‑93 (MQ=255)
                           aCGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGtt                                                              >  2:4752101/1‑93 (MQ=255)
                             ggTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCa                                                            <  1:8775816/93‑1 (MQ=255)
                               tGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATc                                                          >  2:2786171/1‑93 (MQ=255)
                               tGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATc                                                          <  2:2492093/93‑1 (MQ=255)
                               tGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATc                                                          <  2:4167628/93‑1 (MQ=255)
                                ggCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCg                                                         <  2:5989301/93‑1 (MQ=255)
                                    gCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCtt                                                     >  1:7161183/1‑93 (MQ=255)
                                     cTACCTAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCGGTTCATCGGCTTa                                                    >  2:4262584/1‑93 (MQ=255)
                                      tACCAAACTCGGTCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTaa                                                   <  2:9533375/93‑1 (MQ=255)
                                      tACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTaa                                                   >  1:9821823/1‑93 (MQ=255)
                                      tACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTaa                                                   <  2:819835/93‑1 (MQ=255)
                                       aCCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAAt                                                  >  1:3285066/1‑93 (MQ=255)
                                            aCTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGt                                             <  1:5470117/93‑1 (MQ=255)
                                              tCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTAt                                           <  2:7322140/93‑1 (MQ=255)
                                              tCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTAt                                           <  1:1466769/93‑1 (MQ=255)
                                               cGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTAtt                                          <  1:2693582/93‑1 (MQ=255)
                                               cGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTAtt                                          <  2:305430/93‑1 (MQ=255)
                                               cGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTAtt                                          >  1:9498084/1‑93 (MQ=255)
                                                 gCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCa                                        <  2:1020969/93‑1 (MQ=255)
                                                 gCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCa                                        <  2:8633051/93‑1 (MQ=255)
                                                 gCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCa                                        <  2:7894724/93‑1 (MQ=255)
                                                  ccATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCAc                                       <  2:1067360/93‑1 (MQ=255)
                                                   cATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACg                                      >  1:1368241/1‑93 (MQ=255)
                                                    aTACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACgg                                     <  1:8286353/93‑1 (MQ=255)
                                                     tACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGt                                    >  1:9879212/1‑93 (MQ=255)
                                                     tACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGt                                    >  1:6857033/1‑93 (MQ=255)
                                                      aCGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGtt                                   <  1:7307878/93‑1 (MQ=255)
                                                       cGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTtc                                  <  2:3162875/93‑1 (MQ=255)
                                                         cAGCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTtctc                                <  1:6519840/93‑1 (MQ=255)
                                                           gCGGGAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCag                              <  1:2465587/93‑1 (MQ=255)
                                                           gCGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCag                              >  1:5635896/1‑93 (MQ=255)
                                                            cGGCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCaga                             <  2:7224368/93‑1 (MQ=255)
                                                             ggCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCagaa                            <  2:6667023/93‑1 (MQ=255)
                                                              gCAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCagaag                           >  2:4455576/1‑93 (MQ=255)
                                                               cAGATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCagaaga                          <  2:5431115/93‑1 (MQ=255)
                                                                 gATCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGAtg                        >  2:6225373/1‑93 (MQ=255)
                                                                  aTCGCGATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGAtgt                       <  2:1588447/93‑1 (MQ=255)
                                                                      cgATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATgtggtg                   >  1:4734953/1‑93 (MQ=255)
                                                                       gATAAGACTTCATCCCCTGATTGAAAAGTTGTACCGGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGa                  <  1:2567228/93‑1 (MQ=255)
                                                                       gATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGa                  <  1:10011267/93‑1 (MQ=255)
                                                                       gATAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGa                  >  2:139653/1‑93 (MQ=255)
                                                                         tAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAAc                >  1:5011674/1‑93 (MQ=255)
                                                                         tAAGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAAc                <  1:3017632/93‑1 (MQ=255)
                                                                          aaGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGaaat               >  2:1820489/1‑91 (MQ=255)
                                                                          aaGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACa               <  1:4287497/93‑1 (MQ=255)
                                                                          aaGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACa               <  2:4053758/93‑1 (MQ=255)
                                                                          aaGACTTCAGCCCCTGAGTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACa               <  1:8902034/93‑1 (MQ=255)
                                                                           aGACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACAt              <  2:8814896/93‑1 (MQ=255)
                                                                            gACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACAtt             >  1:666724/1‑93 (MQ=255)
                                                                            gACTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACAtt             >  1:4402150/1‑93 (MQ=255)
                                                                              cTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGc           <  1:3834562/93‑1 (MQ=255)
                                                                              cTTCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGc           <  2:7591808/93‑1 (MQ=255)
                                                                                tCAGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCAt         >  2:2168758/1‑93 (MQ=255)
                                                                                  aGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCt       <  1:9339168/93‑1 (MQ=255)
                                                                                  aGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCt       <  2:9269865/93‑1 (MQ=255)
                                                                                  aGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCt       <  2:3646618/93‑1 (MQ=255)
                                                                                  aGCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCt       <  2:4775638/93‑1 (MQ=255)
                                                                                   gCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCtt      <  1:9141803/93‑1 (MQ=255)
                                                                                   gCCCCTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCtt      >  2:679584/1‑93 (MQ=255)
                                                                                    ccccTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCttt     >  1:8463985/1‑93 (MQ=255)
                                                                                    ccccTGATTGAAAATTTGTACGTGACCCGGGCAGTACATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCttt     >  1:3589560/1‑93 (MQ=255)
                                                                                      ccTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCTTTGt   >  1:3382321/1‑93 (MQ=255)
                                                                                      ccTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCTTTGt   >  2:705728/1‑93 (MQ=255)
                                                                                      ccTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCTTTGt   <  2:132452/93‑1 (MQ=255)
                                                                                      ccTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCTTTGt   <  2:3946004/93‑1 (MQ=255)
                                                                                       cTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCTTTGTa  <  2:8705776/93‑1 (MQ=255)
                                                                                       cTGATTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCTTTGTa  <  2:2038897/93‑1 (MQ=255)
                                                                                          |                                                                                         
GCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTCTCAGAAGATGTGGTGAACATTGCATCTTTGTA  >  NC_000913/1799479‑1799658

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: