BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	200,585	A→G	Q35R (CAG→CGG)	hlpA →	histone‑like protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	200,585	0	A	G	100.0%	1096.0 / NA	338	Q35R (CAG→CGG)	hlpA	histone‑like protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (170/168); total (170/168)

Only 100 of 366 total aligned reads displayed.

TATTAGCTGCAGGTCTCGGTTTAGCACTGGCAACTTCTGCTCAGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCAGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCAGCGAACTGCAGCGTATGGAAACCGATCTGC  >  NC_000913/200495‑200674

tattaGCTGCAGGTCTCGGTTTAGCACTGGCAACTTCTGCTCAGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCggg                                                                                         >  1:9519299/1‑93 (MQ=255)

tattaGCTGCAGGTCTCGGTTTAGCACTGGCAACTTCTGCTCAGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCggg                                                                                         >  2:5149536/1‑93 (MQ=255)

  ttaGCTGCAGGTCTCGGTTTAGCACTGGCAACTTCTGCTCAGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTa                                                                                       >  1:3277082/1‑93 (MQ=255)

    aGCTGCAGGTCTCGGTTTAGCACTGGCAACTTCTGCTCAGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAgc                                                                                     <  2:4661968/93‑1 (MQ=255)

    aGCTGCAGGTCTCGGTTTAGCACTGGCAACTTCTGCTCAGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAgc                                                                                     <  2:1715969/93‑1 (MQ=255)

     gCTGCAGGTCTCGGTTTAGCACTGGCAACTTCTGCTCAGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAgcg                                                                                    <  2:8599429/93‑1 (MQ=255)

      cTGCAGGTCTCGGTTTAGCACTGGCAACTTCTGCTCAGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAgcgc                                                                                   >  2:7486002/1‑93 (MQ=255)

       tGCAGGTCTCGGTTTAGCACTGGCAACTTCTGCTCAGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCa                                                                                  >  2:7623598/1‑93 (MQ=255)

          aGGTCTCGGTTTAGCACTGGCAACTTCTGCTCAGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGaa                                                                               >  1:9803570/1‑93 (MQ=255)

            gTCTCGGTTTAGCACTGGCAACTTCTGCTCAGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGaaaa                                                                             <  2:448612/93‑1 (MQ=255)

            gTCTCGGTTTAGCACTGGCAACTTCTGCTCAGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGaaaa                                                                             <  1:1572906/93‑1 (MQ=255)

            gTCTCGGTTTAGCACTGGCAACTTCTGCTCAGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGaaaa                                                                             >  1:8810860/1‑93 (MQ=255)

             tctcGGTTTAGCACTGGCAACTTCTGCTCAGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAAc                                                                            <  1:9873281/93‑1 (MQ=255)

              ctcGGTTTAGCACTGGCAACTTCTGCTCAGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAAcc                                                                           <  1:4458448/93‑1 (MQ=255)

               tcGGTTTAGCACTGGCAACTTCTGCTCAGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCg                                                                          >  2:4621927/1‑93 (MQ=255)

                cGGTTTAGCACTGGCAACTTCTGCTCAGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCgg                                                                         >  1:1946380/1‑93 (MQ=255)

                  gTTTAGCACTGGCAACTTCTGCTCAGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGgtg                                                                       >  2:3840731/1‑93 (MQ=255)

                   tttAGCACTGGCAACTTCTGCTCAGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGgtgt                                                                      <  2:591862/93‑1 (MQ=255)

                    ttAGCACTGGCAACTTCTGCTCAGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGtt                                                                     <  1:2668533/93‑1 (MQ=255)

                     tAGCACTGGCAACTTCTGCTCAGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGttt                                                                    >  1:6898227/1‑93 (MQ=255)

                      aGCACTGGCAACTTCTGCTCAGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTc                                                                   <  2:2678127/93‑1 (MQ=255)

                      aGCACTGGCAACTTCTGCTCAGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTc                                                                   <  2:5476473/93‑1 (MQ=255)

                      aGCACTGGCAACTTCTGCTCAGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCAGTGTTTc                                                                   >  1:6318265/1‑93 (MQ=255)

                       gCACTGGCAACTTCTGCTCAGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCTCAGAAAACCGGTGTTTCt                                                                  >  2:9233333/1‑93 (MQ=255)

                       gCACTGGCAACTTCTGCTCAGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCt                                                                  >  2:4085151/1‑93 (MQ=255)

                        cACTGGCAACTTCTGCTCAGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTa                                                                 <  1:9441467/93‑1 (MQ=255)

                        cACTGGCAACTTCTGCTCAGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTa                                                                 >  2:1108029/1‑93 (MQ=255)

                         aCTGGCAACTTCTGCTCAGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTaa                                                                <  1:6070251/93‑1 (MQ=255)

                          cTGGCAACTTCTGCTCAGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAac                                                               >  1:483299/1‑93 (MQ=255)

                           tGGCAACTTCTGCTCAGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTGTAacc                                                              >  1:8478575/1‑92 (MQ=255)

                           tGGCAACTTCTGCTCAGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAaca                                                              >  2:4036748/1‑93 (MQ=255)

                           tGGCAACTTCTGCTCAGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAaca                                                              >  1:2763084/1‑93 (MQ=255)

                           tGGCAACTTCTGCTCAGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAaca                                                              >  1:2026366/1‑93 (MQ=255)

                            ggCAACTTCTGCTCAGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAacac                                                             <  1:9646323/93‑1 (MQ=255)

                            ggCAACTTCTGCTCAGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAacac                                                             <  1:5878389/93‑1 (MQ=255)

                               aaCTTCTGCTCAGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCt                                                          <  2:3240397/93‑1 (MQ=255)

                                 cTTCTGCTCAGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTgg                                                        >  1:601918/1‑93 (MQ=255)

                                 cTTCTGCTCAGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTgg                                                        >  2:6405237/1‑93 (MQ=255)

                                  ttCTGCTCAGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGa                                                       >  1:623306/1‑93 (MQ=255)

                                     tGCTCAGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGaaaa                                                    <  2:8844213/93‑1 (MQ=255)

                                     tGCTCAGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGaaaa                                                    >  2:3168461/1‑93 (MQ=255)

                                      gCTCAGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAAt                                                   <  2:4171436/93‑1 (MQ=255)

                                        tCAGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGa                                                 >  1:6687154/1‑93 (MQ=255)

                                        tCAGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGa                                                 <  1:2471070/93‑1 (MQ=255)

                                         cAGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAg                                                <  1:3570789/93‑1 (MQ=255)

                                          aGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGt                                               >  2:7128029/1‑93 (MQ=255)

                                          aGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGt                                               >  2:9121372/1‑93 (MQ=255)

                                           ggcggcTGACAAAATTGCCATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGtt                                              <  1:8624600/93‑1 (MQ=255)

                                           ggcggcTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGtt                                              <  2:3310270/93‑1 (MQ=255)

                                           ggcggcTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGtt                                              <  2:8076721/93‑1 (MQ=255)

                                           ggcggcTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGtt                                              >  2:8373643/1‑93 (MQ=255)

                                             cggcTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCa                                            >  2:477470/1‑93 (MQ=255)

                                               gcTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCaaa                                          >  1:926522/1‑93 (MQ=255)

                                               gcTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCaaa                                          >  1:7575301/1‑93 (MQ=255)

                                               gcTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCaaa                                          <  1:7383709/93‑1 (MQ=255)

                                                 tGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAgg                                        >  2:7345306/1‑93 (MQ=255)

                                                 tGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTAAAAgg                                        >  1:5732155/1‑93 (MQ=255)

                                                 tGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGCTGGTTCTAACACGCTGGAAAATGAGTTCAAAgg                                        >  2:6640870/1‑93 (MQ=255)

                                                  gACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGc                                       >  2:6192766/1‑93 (MQ=255)

                                                  gACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGc                                       <  1:9949295/93‑1 (MQ=255)

                                                   aCAATATTGCAATCGTCAACATGGGCAGCATGTTCCAGCGGGTAGCGCAGAAATCCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGcc                                      <  2:4942035/93‑1 (MQ=255)

                                                     aaaaTTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCgg                                    >  1:174251/1‑92 (MQ=255)

                                                      aaaTTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTg                                   <  1:7975602/93‑1 (MQ=255)

                                                           gCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCAGc                              <  2:2504399/93‑1 (MQ=255)

                                                              aTCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCAGCGaa                           >  2:2993356/1‑93 (MQ=255)

                                                              aTCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCAGCGaa                           <  1:726041/93‑1 (MQ=255)

                                                              aTCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCAGCGaa                           <  1:6765548/93‑1 (MQ=255)

                                                              aTCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCAGCGaa                           <  1:6542916/93‑1 (MQ=255)

                                                               tCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCAGCGAAc                          >  2:6789963/1‑93 (MQ=255)

                                                                  tCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCAGCGAACTGc                       >  1:1449372/1‑93 (MQ=255)

                                                                   cAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCAGCGAACTGCa                      <  1:7189603/93‑1 (MQ=255)

                                                                    aaCATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCAGCGAACTGCAg                     >  1:785440/1‑93 (MQ=255)

                                                                     aCATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCAGCGAACTGCAGc                    <  1:5695736/93‑1 (MQ=255)

                                                                       aTGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCAGCGAACTGCAGCGt                  >  1:1099697/1‑93 (MQ=255)

                                                                       aTGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCAGCGAACTGCAGCGt                  >  1:2283466/1‑93 (MQ=255)

                                                                        tGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCg                                     >  1:3241749/1‑73 (MQ=255)

                                                                        tGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCAGCGAACTGCAGCGTa                 <  1:5576773/93‑1 (MQ=255)

                                                                         gggCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCAGCGAACTGCAGCGTAt                >  2:5775904/1‑93 (MQ=255)

                                                                          ggCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCAGCGAACTGCAGCGTATg               >  1:7687464/1‑93 (MQ=255)

                                                                          ggCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTCGAAAATGAGTTCAAAGGTCGTGCCAGCGAACTGCAGCGGATg               >  2:5730733/1‑93 (MQ=255)

                                                                             aGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCAGCGAACTGCAGCGTATGGaa            <  2:220777/93‑1 (MQ=255)

                                                                               ccTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCAGCGAACTGCAGCGTATGGAAAc          <  2:2371476/93‑1 (MQ=255)

                                                                               ccTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCAGCGAACTGCAGCGTATGGAAAc          <  2:4371061/93‑1 (MQ=255)

                                                                               ccTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCAGCGAACTGCAGCGTATGGAAAc          <  1:8062526/93‑1 (MQ=255)

                                                                                 tGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCAGCGAACTGCAGCGTATGGAAACCg        >  2:7011494/1‑93 (MQ=255)

                                                                                   ttCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCAGCGAACTGCAGCGTATGGAAACCGAt      >  2:9683839/1‑93 (MQ=255)

                                                                                   ttCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCAGCGAACTGCAGCGTATGGAAACCGAt      >  2:3370142/1‑93 (MQ=255)

                                                                                   ttCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCAGCGAACTGCAGCGTATGGAAACCGAt      <  2:1235955/93‑1 (MQ=255)

                                                                                   ttCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCAGCGAACTGCAGCGTATGGAAACCGAt      <  1:5039075/93‑1 (MQ=255)

                                                                                   ttCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCAGCGAACTGCAGCGTATGGAAACCGAt      <  1:4646512/93‑1 (MQ=255)

                                                                                   ttCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCAGCGAACTGCAGCGTATGGAAACCGAt      >  1:2950851/1‑93 (MQ=255)

                                                                                    tCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAATGCCGTGCCAGCGAACTGCAGCGTATGGAAACCGATc     >  1:8607579/1‑93 (MQ=255)

                                                                                    tCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCAGCGAACTGCAGCGTATGGAAACCGATc     <  2:3599281/93‑1 (MQ=255)

                                                                                    tCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCAGCGAACTGCAGCGTATGGAAACCGATc     <  1:9321451/93‑1 (MQ=255)

                                                                                    tCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCAGCGAACTGCAGCGTATGGAAACCGATc     <  1:7071934/93‑1 (MQ=255)

                                                                                    tCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCAGCGAACTGCAGCGTATGGAAACCGATc     <  1:3784343/93‑1 (MQ=255)

                                                                                    tCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCAGCGAACTGCAGCGTATGGAAACCGATc     <  1:1209056/93‑1 (MQ=255)

                                                                                     ccAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCAGCGAACTGCAGCGTATGGAAACCGATCt    >  1:42808/1‑93 (MQ=255)

                                                                                     ccAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCAGCGAACTGCAGCGTATGGAAACCGATCt    <  1:2145126/93‑1 (MQ=255)

                                                                                       agcggGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCAGCGAACTGCAGCGTATGGAAACCGATCTGc  <  2:7891486/93‑1 (MQ=255)

TATTAGCTGCAGGTCTCGGTTTAGCACTGGCAACTTCTGCTCAGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCAGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCAGCGAACTGCAGCGTATGGAAACCGATCTGC  >  NC_000913/200495‑200674

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 21 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`