BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,920,902	T→C	Q31R (CAG→CGG)	b1838 ←	protein phosphatase 1

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,920,902	0	T	C	100.0%	1068.1 / NA	335	Q31R (CAG→CGG)	b1838	protein phosphatase 1
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (171/164); total (171/164)

Only 100 of 346 total aligned reads displayed.

CTTTGCGGCCCACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCAAAACGACAATGCCATAATTTGCGGCGCAACTGCTCAAGACAACCGTGTATATCGCCAGAAAGCCAGATATGTCGCCATTGATGACCCGCAATTCTCTGATAAACGGGCGCAGGCTGTTTC  >  NC_000913/1920812‑1920991

  ttGCGGCCCACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCAAAACGACAATGCCATAATTTGCGGCGCAACCGCTc                                                                                       >  2:4459993/1‑93 (MQ=255)

    gCGGCCCACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCAAAACGACAATGCCATAATTTGCGGCGCAACCGCTCaa                                                                                     >  2:9518384/1‑93 (MQ=255)

     cGGCCCACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCAAAACGACAATGCCATAATTTGCGGCGCAACCGCTCAAg                                                                                    <  2:7996072/93‑1 (MQ=255)

      ggCCCACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCAAAACGACAATGCCATAATTTGCGGCGCAACCGCTCAAGa                                                                                   <  2:366904/93‑1 (MQ=255)

      ggCCCACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCAAAACGACAATGCCATAATTTGCGGCGCAACCGCTCAAGa                                                                                   <  1:1444809/93‑1 (MQ=255)

       gCCCACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCAAAACGACAATGCCATAATTTGCGGCGCAACCGCTCAAGAc                                                                                  <  2:6423827/93‑1 (MQ=255)

       gCCCACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCAAAACGACAATGCCATAATTTGCGGCGCAACCGCTCAAGAc                                                                                  >  1:5024165/1‑93 (MQ=255)

       gCCCACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCAAAACGACAATGCCATAATGTGCGGCGCAACCGCTCAAGAc                                                                                  >  2:4989119/1‑93 (MQ=255)

        cccACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCAAAACGACAATGCCATAATTTGCGGCGCAACCGCTCAAGACa                                                                                 >  2:5788442/1‑93 (MQ=255)

         ccACGGTCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCAAAACGACAATGCCATAATTTGCGGCGCAACCGCTCAAGACaa                                                                                <  2:2990937/93‑1 (MQ=255)

         ccACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGGTCAAAACGACAATGCCATAATTTGCGGCGCAACCGCTCAAGACaa                                                                                <  2:5230903/93‑1 (MQ=255)

          cACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCAAAACGACAATGCCATAATTTGCGGCGCAACCGCTCCAGACAAc                                                                               >  2:9586083/1‑93 (MQ=255)

          cACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCAAAACGACAATGCCATAATTTGCGGCGCAACCGCTCAAGACAAc                                                                               <  2:1048826/93‑1 (MQ=255)

          cACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCAAAACGACAATGCCATAATTTGCGGCGCAACCGCTCAAGACAAc                                                                               <  2:8942843/93‑1 (MQ=255)

          cACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCAAAACGACAATGCCATAATTTGCGGCGCAACCGCTCAAGACAAc                                                                               >  2:2803791/1‑93 (MQ=255)

          cACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCAAAACGACAATGCCATAATTTGCGGCGCAACCGCTCAAGACAAc                                                                               >  1:814748/1‑93 (MQ=255)

           aCGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCAAAACGACAATGCCATAATTTGCGGCGCAACCGCTCAAGACAAcc                                                                              >  1:9459179/1‑93 (MQ=255)

             gatcgatAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCAAAACGACAATGCCATAATTTGCGGCGCAACCGCTCAAGACAACCgt                                                                            >  2:6410625/1‑93 (MQ=255)

              atcgatAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCAAAACGACAATGCCATAATTTGCGGCGCAACCGCTCAAGACAACCgtg                                                                           >  1:10020001/1‑93 (MQ=255)

               tcgatAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCCAACCGACAATGCCCTACTTTGCGGCGCAACCGCTCAAGACACACgtga                                                                          >  1:6099354/1‑92 (MQ=255)

               tcgatAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCAAAACGACAATGCCATAATTTGCGGCGCAACCGCTCAAGACAACCgtgt                                                                          >  1:1502029/1‑93 (MQ=255)

               tcgatAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCAAAACGACAATGCCATAATTTGCGGCGCAACCGCTCAAGACAACCgtgt                                                                          >  1:7343451/1‑93 (MQ=255)

                 gatAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCAAAACGACAATGCCATAATTTGCGGCGCAACCGCTCAAGACAACCGTGtat                                                                        >  2:1829742/1‑93 (MQ=255)

                 gatAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCAAAACGACAATGCCATAATTTGCGGCGCAACCGCTCAAGACAACCGTGtat                                                                        >  1:6465979/1‑93 (MQ=255)

                  atAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCAAAACGACAATGCCATAATTTGCGGCGCAACCGCTCAAGACAACCGTGtata                                                                       >  1:6954738/1‑93 (MQ=255)

                   tAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCAAAACGACAATGCCATAATTTGCGGCGCAACCGCTCAAGACAACCGTGTatat                                                                      <  1:5228841/93‑1 (MQ=255)

                    aaCTTCTCCCACTGAGATAAGTAGATCTCGCCACGGATCAAAACGACAATGCCATAATTTGCGGCGCAACCGCTCAAGACAACCGTGTATATc                                                                     <  2:6907143/93‑1 (MQ=255)

                     aCGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCAAAACGACAATGCCATAATTTGTGGCGCAACCGCTCAAGACAACCGTGTATATCg                                                                    <  1:4390236/93‑1 (MQ=255)

                     aCGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCAAAACGACAATGCCATAATTTGCGGCGCAACCGCTCAAGACAACCGTGTATATCg                                                                    <  2:461013/93‑1 (MQ=255)

                     aCGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCAAAACGACAATGCCATAATTTGCGGCGCAACCGCTCAAGACAACCGTGTATATCg                                                                    >  1:5617984/1‑93 (MQ=255)

                      cGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCAAAACGACAATGCCATAATTTGCGGCGCAACCGCTCAAGACAACCGTGTATATCGc                                                                   <  1:9136273/93‑1 (MQ=255)

                       gTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCAAAACGACAATGCCATAATTTGCGGCGCAACCGCTCAAGACAACCGTGTATATCGcc                                                                  <  2:6086872/93‑1 (MQ=255)

                       ctctcCCACTGAGATAAGTAAATCTCGCCACGGATCAAAACGACAATGCCATAATTTGCGGCGCAACCGCTCAAGACAACCGTGTATATCGcc                                                                  <  1:1874131/92‑1 (MQ=255)

                        tctcCCACTGAGATAAGTAAATCTCGCCACGGATCCAAACGACAATGCCATAATTTGCGGCGCAACCGCTCAAGACAACCGTGTATATCGCCa                                                                 <  1:1039982/93‑1 (MQ=255)

                        tctcCCACTGAGATAAGTAAATCTCGCCACGGATCAAAACGACAATGCCATAATTTGCGGCGCAACCGCTCAAGACAACCGTGTATATCGCCa                                                                 >  1:768990/1‑93 (MQ=255)

                        tctcCCACTGAGATAAGTAAATCTCGCCACGGATCAAAACGACAATGCCATAATTTGCGGCGCAACCGCTCAAGACAACCGTGTATATCGCCa                                                                 <  1:8054535/93‑1 (MQ=255)

                        tctcCCACTGAGATAAGTAAATCTCGCCACGGATCAAAACGACAATGCCATAATTTGCGGCGCAACCGCTCAAGACAACCGTGTATATCGCCa                                                                 >  2:8591182/1‑93 (MQ=255)

                          tcCCACTGAGATAAGTAAATCTCGCCACGGATCAAAACGACAATGCCATAATTTGCGGCGCAACCGCTCAAGACAACCGTGTATATCGCCAGa                                                               <  2:7208935/93‑1 (MQ=255)

                          tcCCACTGAGATAAGTAAATCTCGCCACGGATCAAAACGACAATGCCATAATTTGCGGCGCAACCGCTCAAGACAACCGTGTATATCGCCAGa                                                               >  1:1837989/1‑93 (MQ=255)

                           cccACTGAGATAAGTAAATCTCGCCACGGATCAAAACGACAATGCCATAATTTGCGGCGCAACCGCTCAAGACAACCGTGTATATCGCCAGaa                                                              <  1:511376/93‑1 (MQ=255)

                             cACTGAGATAAGTAAATCTCGCCACGGATCAAAACGACAATGCCATAATTTGCGGCGCAACCGCTCAAGACAACCGTGTATATCGCCAGAAAg                                                            >  1:2070207/1‑93 (MQ=255)

                             cACTGAGATAAGTAAATCTCGCCACGGATCAAAACGACAATGCCATAATTTGCGGCGCAACCGCTCAAGACAACCGTGTATATCGCCAGAAAg                                                            >  2:73128/1‑93 (MQ=255)

                              aCTGAGATAAGTAAATCTCGCCACGGATCAAAACGACAATGCCATAATTTGCGGCGCAACCGCTCAAGACAACCGTGTATATCGCCAGAAAGc                                                           >  2:7931651/1‑93 (MQ=255)

                              aCTGAGATAAGTAAATCCCGCCACGGATCAAAACGACAATGCCATAATTTGCGGCGCAACCGCTCAAGACAACCGTGTATATCGCCAGAAAGc                                                           >  1:6137705/1‑93 (MQ=255)

                               cTGAGATAAGTAAATCTCGCCACGGATCAAAACGACAATGCCATAATTTGCGGCGCAACCGCTCAAGACAACCGTGTATATCGCCAGAAAGcc                                                          >  2:6208909/1‑93 (MQ=255)

                               cTGAGATAAGTAAATCTCGCCACGGATCAAAACGACAATGCCATAATTTGCGGCGCAACCGCTCAAGACAACCGTGTATATCGCCAGAAAGcc                                                          >  2:8748282/1‑93 (MQ=255)

                               cTGAGATAAGTAAATCTCGCCACGGATCAAAACGACAATGCCATAATTTGCGGCGCAACCGCTCAAGACAACCGTGTATATCGCCAGAAAGcc                                                          <  1:9343896/93‑1 (MQ=255)

                                tGAGATAAGTAAATCTCGCCACGGATCAAAACGACAATGCCATAATTTGCGGCGCAACCGCTCAAGACAACCGTGTATATCGCCAGAAAGCCa                                                         >  2:3308899/1‑93 (MQ=255)

                                tGAGATAAGTAAATCTCGCCACGGATCAAAACGACAATGCCATAATTTGCGGCGCAACCGCTCAAGACAACCGTGTATATCGCCAGAAAGCCa                                                         >  1:2429239/1‑93 (MQ=255)

                                tGAGATAAGTAAATCTCGCCACGGATCAAAACGACAATGCCATAATTTGCGGCGCAACCGCTCAAGACAACCGTGTATATCGCCAGAAAGCCa                                                         >  1:4697619/1‑93 (MQ=255)

                                tGAGATAAGTAAATCTCGCCACGGATCAAAACGACAATGCCATAATTTGCGGCGCAACCGCTCAAGACAACCGTGTATATCGCCAGAAAGCCa                                                         >  1:2888494/1‑93 (MQ=255)

                                tGAGATAAGTAAATCTCGCCACGGATCAAAACGACAATGCCATAATTTGCGGCGCAACCGCTCAAGACAACCGTGTATATCGCCAGAAAGCCa                                                         >  1:2771241/1‑93 (MQ=255)

                                 gagaTAAGTAAATCTCGCCACGGATCAAAACGACAATGCCATAATTTGCGGCGCAACCGCTCAAGACAACCGTGTATATCGCCAGAAAGCCAg                                                        >  1:409265/1‑93 (MQ=255)

                                 gagaTAAGTAAATCTCGCCACGGATCAAAACGACAATGCCATAATTTGCGGCGCAACCGCTCAAGACAACCGTGTATATCGCCAGAAAGCCAg                                                        >  1:2471832/1‑93 (MQ=255)

                                  agaTAAGTAAATCTCGCCACGGATCAAAACGACAATGCCATAATTTGCGGCGCAACCGCTCAAGACAACCGTGTATATCGCCAGAAAGCCAGa                                                       <  2:9738831/93‑1 (MQ=255)

                                   gaTAAGTAAATCTCGCCACGGATCAAAACGACAATGCCATAATTTGCGGCGCAACCGCTCAAGACAACCGTGTATATCGCCAGAAAGCCAGat                                                      <  2:7776428/93‑1 (MQ=255)

                                    aTAAGTAAATCTCGCCACGGATCAAAACGACAATGCCATAATTTGCGGCGCAACCGCTCAAGACAGCCGTGTATATCGCCAGAAAGCCAGata                                                     <  1:9566775/93‑1 (MQ=255)

                                    aTAAGTAAATCTCGCCACGGATCAAAACGACAATGCCATAATTTGCGGCGCAACCGCTCAAGACAACCGTGTATATCGCCAGAAAGCCAGata                                                     <  2:2016990/93‑1 (MQ=255)

                                    aTAAGTAAATCTCGCCACGGATCAAAACGACAATGCCATAATTTGCGGCGCAACCGCTCAAGACAACCGTGTATATCGCCAGAAAGCCAGata                                                     <  1:2277828/93‑1 (MQ=255)

                                       aGTAAATCTCGCCACGGATCAAAACGACAATGCCATAATTTGCGGCGCAACCGCTCAAGACAACCGTGTATATCGCCAGAAAGCCAGATATGt                                                  <  1:269468/93‑1 (MQ=255)

                                       aGTAAATCTCGCCACGGATCAAAACGACAATGCCATAATTTGCGGCGCAACCGCTCAAGACAACCGTGTATATCGCCAGAAAGCCAGATATGt                                                  >  2:6294536/1‑93 (MQ=255)

                                       aGTAAATCTCGCCACGGATCAAAACGACAATGCCATAATTTGCGGCGCAACCGCTCAAGACAACCGTGTATATCGCCAGAAAGCCAGATATGt                                                  <  2:7086457/93‑1 (MQ=255)

                                       aGTAAATCTCGCCACGGATCAAAACGACAATGCCATAATTTGCGGCGCAACCGCTCAAGACAACCGTGTATATCGCCAGAAAGCCAGATATGt                                                  <  2:4153290/93‑1 (MQ=255)

                                          aaaTCTCGCCACGGATCAAAACGACAATGCCATAATTTGCGGCGCAACCGCTCAAGACAACCGTGTATATCGCCAGAAAGCCAGATATGTCGc                                               <  2:4087943/93‑1 (MQ=255)

                                           aaTCTCGCCACGGATCAAAACGACAATGCCATAATTTGCGGCGCAACCGCTCAAGACAACCGTGTATATCGCCAGAAAGCCAGATATGTCGcc                                              >  2:1740872/1‑93 (MQ=255)

                                             actcGCCACGGATCAAAACGACAATGCCATAGTTTGCGGCGCAACCGCTCAAGACAACCGTGTATATCGCCAGAAAGCCAGATATGTCGCCAt                                            <  2:5572976/92‑1 (MQ=255)

                                               tcGCCACGGATCAAAACGACAATGCCATAATTTGCGGCGCAACCGCTCAAGACAACCGTGTATATCGCCAGAAAGCCAGATATGTCGCCATtg                                          >  1:4640393/1‑93 (MQ=255)

                                                 gCCACGGATCAAAACGACAATGCCATAATTTGCGGCGCAACCGCTCAAGACAACCGTGTATATCGCCAGAAAGCCAGATATGTCGCCATtgat                                        <  2:7554803/93‑1 (MQ=255)

                                                 gCCACGGATCAAAACGACAATGCCATAATTTGCGGCGCAACCGCTCAAGACAACCGTGTATATCGCCAGAAAGCCAGATATGTCGCCATtgat                                        >  2:140540/1‑93 (MQ=255)

                                                  ccACGGATCAAAACGACAATGCCATAATTTGCGGCGCAACCGCTCAAGACAACCGTGTATATCGCCAGAAAGCCAGATATGTCGCCATtgatg                                       >  2:3915307/1‑93 (MQ=255)

                                                  ccACGGATCAAAACGACAATGCCATAATTTGCGGCGCAACCGCTCAAGACAACCGTGTATATCGCCAGAAAGCCAGATATGTCGCCATtgatg                                       <  1:5524236/93‑1 (MQ=255)

                                                    ccGGATCAAAACGACAATGCCATAATTTGCGGCGCATCCGCTCAAGACACCCGTGTATATCGCCAGAAAGCCAGATATGTCGCCATTGATGAc                                     <  2:120665/92‑1 (MQ=255)

                                                      ggATCAAAACGACAATGCCATAATTTGCGGCGCAACCGCTCAAGACAACCGTGTATATCGCCAGAAAGCCAGATATGTCGCCATTGATGAccc                                   <  1:7564230/93‑1 (MQ=255)

                                                         tCAAAACGACAATGCCATAATTTGCGGCGCAACCGCTCAAGACAACCGTGTATATCGCCAGAAAGCCAGATATGTAGCCATTGATGACCCGCa                                >  2:3984828/1‑93 (MQ=255)

                                                          cAAAACGACAATGCCATAATTTGCGGCGCAACCGCTCAAGACAACCGTGTATATCGCCAGAAAGCCAGATATGTCGCCATTGATGACCCGCaa                               >  2:3456808/1‑93 (MQ=255)

                                                           aaaaCGACAATGCCATAATTTGCGGCGCAACCGCTCAAGACAACCGTGTATATCGCCAGAAAGCCAGATATGTCGCCATTGATGACCCGCAAt                              >  1:3196186/1‑93 (MQ=255)

                                                            aaaCGACAATGCCATAATTTGCGGCGCAACCGCTCAAGACAACCGTGTATATCGCCAGAAAGCCAGATATGTCGCCATTGATGACCCGCAAtt                             <  1:8869747/93‑1 (MQ=255)

                                                             aaCGACAATGCCATAATTTGCGGCGCAACCGCTCAAGACAACCGTGTATATCGCCAGAAAGCCAGATATGTCGCCATTGATGACCCGCAATtc                            <  2:8110812/93‑1 (MQ=255)

                                                               cGACAATGCCATAATTTGCGGCGCAACCGCTCAAGACAACCGTGTATATCGCCAGAAAGCCAGATATGTCGCCATTGATGACCCGCAATtctc                          <  2:9874153/93‑1 (MQ=255)

                                                               cGACAATGCCATAATTTGCGGCGCAACCGCTCAAGACAACCGTGTATATCGCCAGAAAGCCAGATATGTCGCCATTGATGACCCGCAATtctc                          >  2:3580059/1‑93 (MQ=255)

                                                                gACAATGCCATAATTTGCGGCGCAACCGCTCAAGACAACCGTGTATATCGCCAGAAAGCCAGATATGTCGCCATTGATGACCCGCAATTctct                         >  1:9791650/1‑93 (MQ=255)

                                                                  cAATGCCATAATTTGCGGCGCAACCGCTCAAGACAACCGTGTATATCGCCAGAAAGCCAGATATGTCGCCATTGATGACCCGCAATTCTCTGa                       >  2:5274521/1‑93 (MQ=255)

                                                                  cAATCCCATAATTGGCGGCCCAACCGCTCAAGACAACCGTGTATATCGCCAGAAAGCCAGATATGTCGCCATTGATGACCCGCAATTCTCTGa                       <  1:8307753/93‑1 (MQ=255)

                                                                   aaTGCCATAATTTGCGGCGCAACCGCTCAAGACAACCGTGTATATCGCCAGAAAGCCAGATATGTCGCCATTGATGACCCGCAATTCTCTGAt                      >  1:3466522/1‑93 (MQ=255)

                                                                   aaTGCCATAATTTGCGGCGCAACCGCTCAAGACAACCGTGTATATCGCCAGAAAGCCAGATATGTCGCCATTGATGACCCGCAATTCTCTGAt                      >  1:5375858/1‑93 (MQ=255)

                                                                    aTGCCATAATTTGCGGCGCAACCGCTCAAGACAACCGTGTATATCGCCAGAAAGCCAGATATGTCGCCATTGATGACCCGCAATTCTCTGATa                     <  2:3127315/93‑1 (MQ=255)

                                                                     tGCCATAATTTGCGGCGCAACCGCTCAAGACAACCGTGTATATCGCCAGAAAGCCAGATATGTCGCCATTGATGACCCGCAATTCTCTGATaa                    >  2:1833419/1‑93 (MQ=255)

                                                                      gCCATAATTTGCGGCGCAACCGCTCAAGACAACCGTGTATATCGCCAGAAAGCCAGATATGTCGCCATTGATGACCCGCAATTCTCTGATaaa                   <  2:3060929/93‑1 (MQ=255)

                                                                       ccATAATTTGCGGCGCAACCGCTCAAGACAACCGTGTATATCGCCAGAAAGCCAGATATGTCGCCATTGATGACCCGCAATTCTCTGATAAAc                  >  1:3684410/1‑93 (MQ=255)

                                                                        cATAATTTGCGGCGCAACCGCTCAAGACAACCGTGTATATCGCCAGAAAGCCAGATATGTCGCCATTGATGACCCGCAATTCTCTGATAAACg                 >  2:2299167/1‑93 (MQ=255)

                                                                         aTAATTTGCGGCGCAACCGCTCAAGACAACCGTGTATATCGCCAGAAAGCCAGATATGTCGCCATTGATGACCCGCAATTCTCTGATAAACgg                >  1:6250766/1‑93 (MQ=255)

                                                                         aTAATTTGCGGCGCAACCGCTCAAGACAACCGTGTATATCGCCAGAAAGCCAGATATGTCGCCATTGATGACCCGCAATTCTCTGATAAACgg                >  2:5457803/1‑93 (MQ=255)

                                                                          tAATTTGCGGCGCAACCGCTCAAGACAACCGTGTATATCGCCAGAAAGCCAGATATGTCGCCATTGATGACCCGCAATTCTCTGATAAACggg               >  2:4738629/1‑93 (MQ=255)

                                                                          tAATTTGCGGCGCAACCGCTCAAGACAACCGTGTATATCGCCAGAAAGCCAGATATGTCGCCATTGATGACCCGCAATTCTCTGATAAACggg               >  2:9116570/1‑93 (MQ=255)

                                                                          tAATTGGCGTCGCAACCGCTCAAGACAACCGTGTATATCGCCAGAAAGCCAGATATGTCGCCATTGATGACCCGCAATTCTCTGATAAACggg               <  1:1305337/93‑1 (MQ=255)

                                                                            aTTTGCGGCGCAACCGCTCAAGACAACCGTGTATATCGCCAGAAAGCCAGATATGTCGCCATTGATGACCCGCAATTCTCTGATAAACGGgcg             <  2:4397223/93‑1 (MQ=255)

                                                                                 cggcgCAACCGCTCAAGACAACCGTGTATATCGCCAGAAAGCCAGATATGTCGCCATTGATGACCCGCAATTCTCTGATAAACGGGCGCAGGc        <  2:2492470/93‑1 (MQ=255)

                                                                                     gcAACCGCTCAAGACAACCGTGTATATCGCCAGAAAGCCAGATATGTCGCCATTGATGACCCGCAATTCTCTGATAAACGGGCGCAGGCTGtt    >  1:3976394/1‑93 (MQ=255)

                                                                                     ccAACCGCTCAAGACAACCGTGTATATCGCCAGAAAGCCAGATATGTCGCCATTGATGACCCGCAATTCTCTGATAAACGGGCGCAGGCTGtt    <  1:5319063/92‑1 (MQ=255)

                                                                                      cAACCGCTCAAGACAACCGTGTATATCGCCAGAAAGCCAGATATGTCGCCATTGATGACCCGCAATTCTCTGATAAACGGGCGCAGGCTGttt   >  1:7802510/1‑93 (MQ=255)

CTTTGCGGCCCACGATCGATAACGTCTCCCACTGAGATAAGTAAATCTCGCCACGGATCAAAACGACAATGCCATAATTTGCGGCGCAACTGCTCAAGACAACCGTGTATATCGCCAGAAAGCCAGATATGTCGCCATTGATGACCCGCAATTCTCTGATAAACGGGCGCAGGCTGTTTC  >  NC_000913/1920812‑1920991

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`