Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,106,960 T→C D216G (GAC→GGC)  rfbX ← putative O‑antigen transporter

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,106,9600TC99.8% 1504.4 / NA 466D216G (GAC→GGC) rfbXputative O‑antigen transporter
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base C (245/220);  minor base G (0/1);  total (245/221)
Fisher's exact test for biased strand distribution p-value = 4.74e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 470 total aligned reads displayed.

GACGTTGGTCCAGATATAAATCCCAGGATAATAACTATTCCCGTAGAATATAAACTAATAGCAGATGTGGAAATAAAAACATGAAAACCGTCTGCTAAAGATCGACGCACATTATGTAATGATAGCGTAACTTTACCAATCCAACCTTCATGAACAACGATAGCTAGTGCAATAATTCCA  >  NC_000913/2106870‑2107049
                                                                                          |                                                                                         
gACGTTGGTCCAGATATAAATCCCAGGATAATAACTATTCCCGTAGAATATAAACTAATAGCAGATGTGGAAATAAAAACATGAAAACCGCCt                                                                                         <  2:3082084/93‑1 (MQ=255)
gACGTTGGTCCAGATATAAATCCCAGGATAATAACTATTCCCGTAGAATATAAACTAATAGCAGATGTGGAAATAAAAACATGAAAACCGCCt                                                                                         >  2:4768549/1‑93 (MQ=255)
gACGTTGGTCCAGATATAAATCCCAGGATAATAACTATTCCCGTAGAATATAAACTAATAGCAGATGTGGAAATAAAAACATGAAAACCGCCt                                                                                         <  1:554919/93‑1 (MQ=255)
  cGTTGGTCCAGATATAAATCCCAGGATAATAACTATTCCCGTAGAATATAAACTAATAGCAGATGTGGAAATAAAAACATGAAAACCGCCTGc                                                                                       >  2:344092/1‑93 (MQ=255)
        tCCAGATATAAATCCCAGGATAATAACTATTCCCGTAGAATATAAACTAATAGCAGATGTGTAAATAAAAACATGAAAACCGCCTGCTAAAGa                                                                                 >  1:2897176/1‑93 (MQ=255)
        tCCAGATATAAATCCCAGGATAATAACTATTCCCGTAGAATATAAACTAATAGCAGATGTGGAAATAAAAACATGAAAACCGCCTGCTAAAGa                                                                                 <  1:8065062/93‑1 (MQ=255)
          cAGATATAAATCCCAGGATAATAACTATTCCCGTAGAATATAACCTAATAGCAGATGTGGAAATAAAAACATGAAAACCGCCTGCTAAAGATc                                                                               <  1:2822367/93‑1 (MQ=255)
          cAGATATAAATCCCAGGATAATAACTATTCCCGTAGAATATAAACTAATAGCAGATGTGGAAATAAAAACACGAAAACCGCCTGCTAAAGATc                                                                               <  1:1816745/93‑1 (MQ=255)
           aGATATAAATCCCAGGATAATAACTATTCCCGTAGAATATAAACTAATAGCAGATGTGGAAATAAAAACATGACAACCGCCTGCTCAAGATCg                                                                              >  2:6595013/1‑93 (MQ=255)
           aGATATAAATCCCAGGATAATAACTATTCCCGTAGAATATAAACTAATAGCAGATGTGGAAATAAAAACATGAAAACCGCCTGCTAAAGATCg                                                                              >  1:2255227/1‑93 (MQ=255)
           aGATATAAATCCCAGGATAATAACTATTCCCGTAGAATATAAACTAATAGCAGATGTGGAAATAAAAACATGAAAACAGCCTGCTAAAGATCg                                                                              >  2:4382569/1‑93 (MQ=255)
            gATATAAATCCCAGGATAATAACTATTCCCGTAGAATATAAACTAATAGCAGATGTGGAAATAAAAACATGAAAACCGCCTGCTAAAGATCGa                                                                             <  1:9918295/93‑1 (MQ=255)
            gATATAAATCCCAGGATAATAACTATTCCCGTAGAATATAAACTAATAGCAGATGTGGAAATAAAAACATGAAAACCGCCTGCTAAAGATCGa                                                                             <  1:7336779/93‑1 (MQ=255)
              tataAATCCCAGGATAATAACTATTCCCGGAGAATATAAACTAATAGCAGATGTGGAAATAAAAACATGAACACAGCCTGATAAAGATCCACg                                                                           >  2:4960182/1‑93 (MQ=255)
                 aaaTCCCAGGATAATAACTATTCCCGTAGAATATAAACTAATAGCAGATGTGGAAATAAAAACATGAAAACCGCCTGCTAAAGATCGACGcac                                                                        >  2:954576/1‑93 (MQ=255)
                 aaaTCCCAGGATAATAACTATTCCCGTAGAATATAAACTAATAGCAGATGTGGAAATAAAAACATGAAAACCGCCTGCTAAAGATCGACGcac                                                                        >  1:5159810/1‑93 (MQ=255)
                   aTCCCAGGATAATAACTATTCCCGTAGAATATAAACTAATAGCAGATGTGGAAATAAAAACATGAAAACCGCCTGCTAAAGATCGACGCACAt                                                                      >  1:1920968/1‑93 (MQ=255)
                    tCCCAGGATAATAACTATTCCCGTAGAATATAAACTAATAGCAGATGTGGAAATAAAAACATGAAAACCGCCTGCTAAAGATCGACGCACAtt                                                                     >  2:16513/1‑93 (MQ=255)
                          gATAATAACTATTCCCGTAGAATATAAACTAATAGCAGATGTGGAAATAAAAACATGAAAACCGCCTGCTAAAGATCGACGCACATTATGTaa                                                               <  2:1215248/93‑1 (MQ=255)
                           ataataACTATTCCCGTAGAATATAAACTAATAGCAGATGTGGAAATAAAAACATGAAAACCGCCTGCTAAAGATCGACGCACATTATGTAAt                                                              <  1:3750288/93‑1 (MQ=255)
                           ataataACTATTCCCGTAGAATATAAACTAATAGCAGATGTGGAAATAAAAACATGAAAACCGCCTGCTAAAGATCGACGCACATTATGTAAt                                                              <  1:8457060/93‑1 (MQ=255)
                           ataataACTATTCCCGTAGAATATAAACTAATAGCAGATGTGGAAATAAAAACATGAAAACCGCCTGCTAAAGATCGACGCACATTATGTAAt                                                              >  1:6321581/1‑93 (MQ=255)
                           ataataACTATTCCCGTAGAATATAAACTAATAGCAGATGTGGAAATAAAAACATGAAAACCGCCTGCTAAAGATCGACGCACATTATGTAAt                                                              >  1:2184062/1‑93 (MQ=255)
                            taataaCTATTCCCGTAGAATATAAACTAATAGCAGATGTGGAAATAAAAACATGAAACCCGCCTGCTAAAGATCGACGCACATTATGTAATg                                                             <  2:7443455/93‑1 (MQ=255)
                             aataaCTATTCCCGTAGAATATAAACTAATAGCAGATGTGGAAATAAAAACATGAAAACCGCCTGCTAAAGATCGACGCACATTATGTAATGa                                                            <  1:3264101/93‑1 (MQ=255)
                             aataaCTATTCCCGTAGAATATAAACTAATAGCAGATGTGGAAATAAAAACATGAAAACCGCCTGCTAAAGATCGACGCACATTATGTAATGa                                                            <  2:5748689/93‑1 (MQ=255)
                             aataaCTATTCCCGTAGAATATAAACTAATAGCAGATGTGGAAATAAAAACATGAAAACCGCCTGCTAAAGATCGACGCACATTATGTAATGa                                                            >  1:4561202/1‑93 (MQ=255)
                              ataaCTATTCCCGTAGAATATAAACTAATAGCAGATGTGGAAATAAAAACATGAAAACCGCCTGCTAAAGATCGACGCACATTATGTAATGAt                                                           >  2:8635901/1‑93 (MQ=255)
                              ataaCTATTCCCGTAGAATATAAACTAATAGCAGATGTGGAAATAAAAACATGAAAACCGCCTGCTAAAGATCGACGCACATTATGTAATGAt                                                           <  2:373210/93‑1 (MQ=255)
                               taaCTATTCCCGTAGAATATAAACTAATAGCAGATGTGGAAATAAAAACATGAAAACCGCCTGCTAAAGATCGACGCACATTATGTAATGATa                                                          <  1:3109783/93‑1 (MQ=255)
                               taaCTATTCCCGTAGAATATAAACTAATAGCAGATGTGGAAATAAAAACATGAAAACCGCCTGCTAAAGATCGACGCACATTATATAATGATa                                                          >  1:4704080/1‑93 (MQ=255)
                                agcTATTCCCGTAGAATATAGACTAATAGCAGATGTGGAAATAAGAACATGAGACCCTCCTGCTAAAGATCGACGCACATTATGTAATGATAg                                                         <  2:1406945/91‑1 (MQ=255)
                                aaCTATTCCCGTAGAATATAAACTAATAGCAGATGTGGAAATAAAAACATGAAAACCGCCTGCTAAAGATCGACGCACATTATGTAATGATAg                                                         >  1:961728/1‑93 (MQ=255)
                                aaCTATTCCCGTAGAATATAAACTAATAGCAGATGTGGAAATAAAAACATGAAAACCGCCTGCTAAAGATCGACGCACATTATGTAATGATAg                                                         >  2:2026806/1‑93 (MQ=255)
                                 aCTATTCCCGTAGAATATAAACTAATAGCAGATGTGGAAATAAAAACATGAAAACCGCCTGCTAAAGATCGACGCACATTATGTAATGATAGc                                                        <  1:3410712/93‑1 (MQ=255)
                                  cTATTCCCGTAGAATATAAACTAATAGCAGATGTGGAAATAAAAACATGAAAACCGCCTGCTAAAGATCGACGCACATTATGTAATGATAGCg                                                       >  1:8988551/1‑93 (MQ=255)
                                   tATTCCCGTAGAATATAAACTAATAGCAGATGTGGAAATAAAAACATGAAAACCGCCTGCTAAAGATCGACGCACATTATGTAATGATAGCGt                                                      >  2:8307490/1‑93 (MQ=255)
                                    aTTCCCGTAGAATATAAACTAATAGCAGATGTGGAAATAAAAACATGAAAACCGCCTGCTAAAGATCGACGCACATTATGTAATGATAGCGTa                                                     <  1:5372325/93‑1 (MQ=255)
                                    aTTCCCGTAGAATATAAACTAATAGCAGATGTGGAAATAAAAACATGAAAACCGCCTGCTAAAGATCGACGCACATTATGTAATGATAGCGTa                                                     <  1:6155646/93‑1 (MQ=255)
                                    aTTCCCGTAGAATATAAACTAATAGCAGATGTGGAAATAAAAACATGAAAACCGCCTGCTAAAGATCGACGCACATTATGTAATGATAGCGTa                                                     >  2:8080844/1‑93 (MQ=255)
                                     ttCCTGTAGAATATAAACTAATAGCAGATGTGGAAATAAAAACATGAAAACCGCCTGCTAAAGATCGACGCACATTATGTAATGATAGCGTaa                                                    <  1:8637757/93‑1 (MQ=255)
                                     ttCCCGTAGAATATAAACTAATAGCAGATGTGGAAATAAAAACATGAAAACCGCCTGCTAAAGATCGACGCACATTATGTAATGATAGCGTaa                                                    >  1:9681135/1‑93 (MQ=255)
                                      tCCCGTAGAATATAAACTAATAGCAGATGTGGAAATAAAAACATGAAAACCGCCTGCTAAAGATCGACGCACATTATGTAATGATAGCGTAAc                                                   >  2:762202/1‑93 (MQ=255)
                                        ccGTAGAATATAAACTAATAGCAGATGTGGAAATAAAAACATGAAAAACGCCTGCTAAAGATCGACGCACATTATGTAATGATAGCGTAACtt                                                 >  2:9314043/1‑93 (MQ=255)
                                         cGTAGAATATAAACTAATAGCAGATGTGGAAATAAAAACATGAAAACCGCCTGCTAAAGATCGACGCACATTATGTACTGATAGCGTAACttt                                                >  1:5986894/1‑93 (MQ=255)
                                         cGTAGAATATAAACTAATAGCAGATGTGGAAATAAAAACATGAAAACCGCCTGCTAAAGATCGACGCACATTATGTAATGATAGCGTAACttt                                                >  2:6278425/1‑93 (MQ=255)
                                         cGTAGAATATAAACTAATAGCAGATGTGGAAATAAAAACATGAAAACCGCCTGCTAAAGATCGACGCACATTATGTAATGATAGCGTAACttt                                                >  2:214249/1‑93 (MQ=255)
                                         cGTAGAATATAAACTAATAGCAGATGTGGAAATAAAAACATGAAAACCGCCTGCTAAAGATCGACGCACATTATGTAATGATAGCGTAACttt                                                <  1:7886213/93‑1 (MQ=255)
                                         cGTAGAATATAAACTAATAGCAGATGTGGAAATAAAAACATGAAAACCGCCTGCTAAAGATCGACGCACATTATGTAATGATAGCGTAACttt                                                <  1:3618070/93‑1 (MQ=255)
                                          gTAGAATATAAACTAATAGCAGATGTGGAAATAAAAACATGAAAACCGCCTGCTAAAGATCGACGCACATTATGTAATGATAGCGTAACTTTa                                               >  1:2969439/1‑93 (MQ=255)
                                             gAATATAAACTAATAGCAGATGTGGAAATAAAAACATGAAAACCGCCTGCTAAAGATCGACGCACATTATGTAATGATAGCGTAACTTTACCa                                            >  2:8449316/1‑93 (MQ=255)
                                              aaTATAAACTAATAGCAGATGTGGAAATAAAAACATGAAAACCGCCTGCTAAAGATCGACGCACATTATGTAATGATAGCGTAACTTTACCaa                                           >  1:6529309/1‑93 (MQ=255)
                                              aaTATAAACTAATAGCAGATGTGGAAATAAAAACATGAAAACCGCCTGCTAAAGATCGACGCACATTATGTAATGATAGCGTAACTTTACCaa                                           <  1:4663157/93‑1 (MQ=255)
                                               atatAAACTAATAGCAGATGTGGAAATAAAAACATGAAAACCGCCTGCTAAAGATCGACGCACATTATGTAATGATAGCGTAACTTTACCAAt                                          >  1:497101/1‑93 (MQ=255)
                                                tataAACTAATAGCAGATGTGGAAATAAAAACATGAAAACCGCCTGCTAAAGATCGACGCACATTATGTAATGATAGCGTAACTTTACCAATc                                         >  2:24868/1‑93 (MQ=255)
                                                tataAACTAATAGCAGATGTGGAAATAAAAACATGAAAACCGCCTGCTAAAGATCGACGCACATTATGTAATGATAGCGTAACTTTACCAATc                                         <  2:869857/93‑1 (MQ=255)
                                                  taAACTAATAGCAGATGTGGAAATAAAAACATGAAAACCGCCTGCTAAAGATCGACGCACATTATGTAATGATAGCGTAACTTTACCAATCCa                                       >  1:1084290/1‑93 (MQ=255)
                                                  taAACTAATAGCAGATGTGGAAATAAAAACATGAAAACCGCCTGCTAAAGATCGACGCACATTATGTAATGATAGCGTAACTTCACCAATCCa                                       <  2:9691353/93‑1 (MQ=255)
                                                   aaaCTAATAGCAGATGTGGAAATAAAAACATGAAAACCGCCTGCTAAAGATCGACGCACATTATGTAATGATAGCGTAACTTTACCAATCCaa                                      <  1:1106535/93‑1 (MQ=255)
                                                   aaaCTAATAGCAGATGTGGAAATAAAAACATGAAAACCGCCTGCTAAAGATCGACGCACATTATGTAATGATAGCGTAACTTTACCAATCCaa                                      <  1:8786261/93‑1 (MQ=255)
                                                    aaCTAATAGCAGATGTGGAAATAAAAACATGAAAACCGCCTGCTAAAGATCGACGCACATTATGTAATGATAGCGTAACTTTACCAATCCAAc                                     <  2:106864/93‑1 (MQ=255)
                                                       tAATAGCAGATGTGGAAATAAAAACATGAAAACCGCCTGCTAAAGATCGACGCACATTATGTAATGATAGCGTAACTTTACCAATCCAACCtt                                  >  2:3306347/1‑93 (MQ=255)
                                                       tAATAGCAGATGTGGAAATAAAAACATGAAAACCGCCTGCTAAAGATCGACGCACATTATGTAATGATAGCGTAACTTTACCAATCCAACCtt                                  >  2:2567991/1‑93 (MQ=255)
                                                       tAATAGCAGATGTGGAAATAAAAACATGAAAACCGCCTGCTAAAGATCGACGCACATTATGTAATGATAGCGTAACTTTACCAATCCAACCtt                                  >  2:5499354/1‑93 (MQ=255)
                                                       tAATAGCAGATGTGGAAATAAAAACATGAAAACCGCCTGCTAAAGATCGACGCACATTATGTAATGATAGCGTAACTTTAACAATCCAACCtt                                  >  1:6635666/1‑93 (MQ=255)
                                                          tAGCAGATGTGGAAATAAAAACATGAAAACCGCCTGCTAAAGATCGACGCACATTATGTAATGATAGCGTAACTTTACCAATCCAACCTTCAt                               <  1:9835237/93‑1 (MQ=255)
                                                          tAGAAGATGTGGAAATAAAAACATGAAAACCGCCTGCTAAAGATCGACGCACATTATGTAATGATAGCGTAACTTTACCAATCCAACCTTCAt                               >  2:9928555/1‑93 (MQ=255)
                                                            gCAGATGTGGAAATAAAAACATGAAAACCGCCTGCTAAAGATCGACGCACATTATGTAATGATAGCGTAACTTTACCAATCCAACCTTCATGa                             <  1:5742164/93‑1 (MQ=255)
                                                            gCAGATGTGGAAATAAAAACATGAAAACCGCCTGCTAAAGATCGACGCACATTATGTAATGATAGCGTAACTTTACCAATCCAACCTTCATGa                             >  1:451241/1‑93 (MQ=255)
                                                              aGATGTGGAAATAAAAACATGAAAACCGCCTGCTAAAGATCGACGCACATTATGTAATGATAGCGTAACTTTACCAATCCAACCTTCATGaac                           >  2:1827705/1‑93 (MQ=255)
                                                                aTGTGGAAATAAAAACAAGAAAACCGCCTGCTAAAGATCGACGCACATTATGTAATGATAGCGTAACTTTACCAATCCAACCTTCATGaacaa                         <  1:1346668/93‑1 (MQ=255)
                                                                   tgGAAATAAAAACATGAAAACCGGCTGCTAAAGATCGACGCACATTATGTAATGATAGCGTAACTTTACCAATCCAACCTTCATGAACAACGa                      <  2:6857589/93‑1 (MQ=255)
                                                                   tgGAAATAAAAACATGAAAACCGCCTGCTAAAGATCGACGCACATTATGTAATGATAGCGTAACTTTACCAATCCAACCTTCATGAACAACGa                      <  1:9491833/93‑1 (MQ=255)
                                                                    ggAAATAAAAACATGAAAACCGCCTGCTAAAGATCGACGCACATTATGTAATGATAGCGTAACTTTACCAATCCAACCTTCATGAACAACGAt                     <  2:3912076/93‑1 (MQ=255)
                                                                    ggAAATAAAAACATGAAAACCGCCTGCTAAAGATCGACGCACATTATGTAATGATAGCGTAACTTTACCAATCCAACCTTCATGAACAACGAt                     <  1:762933/93‑1 (MQ=255)
                                                                     gAAATAAAAACATGAAAACCGCCTGCTAAAGATCGACGCACATTATGTAATGATAGCGTAACTTTACCAATCCAACCTTCATGAACAACGATa                    <  1:418658/93‑1 (MQ=255)
                                                                      aaaTAAAAACATGAAAACCGCCTGCTAAAGATCGACGCACATTATGTAATGATAGCGTAACTTTACCAATCCAACCTTCATGAACAACGATAg                   >  1:1263379/1‑93 (MQ=255)
                                                                      aaaTAAAAACATGAAAACCGCCTGCTAAAGATCGACGCACATTATGTAATGATAGCGTAACTTTACCAATCCAACCTTCATGAACAACGATAg                   <  2:5298224/93‑1 (MQ=255)
                                                                       aaTAAAAACATGAAAACCGCCTGCTAAAGATCGACGCACATTATGTAATGATAGCGTAACTTTACCAATCCAACCTTCATGAACAACGATAGc                  <  2:1923246/93‑1 (MQ=255)
                                                                        aTAAAAACATGAAAACCGCCTGCTAAAGATCGACGCACATTATGTAATGATAGCGTAACGTTACCAATCCAACCTTCATGAACAACGATAGCt                 >  2:8946346/1‑93 (MQ=255)
                                                                         tAAAAACATGAAAACCGCCTGCTAAAGATCGACGCACATTATGTAATGATAGCGTAACTTTACCAATCCAACCTTCATGAACAACGATAGCTa                >  2:5035159/1‑93 (MQ=255)
                                                                         tAAAAACATGAAAACCGCCTGCTAAAGATCGACGCACATTATGTAATGATAGCGTAACTTTACCAATCCAACCTTCATGAACAACGATAGCTa                <  2:7358137/93‑1 (MQ=255)
                                                                         tAAAAACATGAAAACCGCCTGCTAAAGATCGACGCACATTATGTAATGATAGCGTAACTTTACCAATCCAACCTTCATGAACAACGATAGCTa                >  2:4558430/1‑93 (MQ=255)
                                                                          aaaaaCATGAAAACCGCCTGCTAAAGATCGACGCACATTATGTAATGATAGCGTAACTTTACCAATCCAACCTTCATGAACAACGATAGCTAg               >  1:7089615/1‑93 (MQ=255)
                                                                          aaaaaCATGAAAACCGCCTGCTAAAGATCGACGCACATTATGTAATGATAGCGTAACTTTACCAATCCAACCTTCATGAACAACGATAGCTAg               <  1:1441664/93‑1 (MQ=255)
                                                                          aaaaaCATGAAAACCGCCTGCTAAAGATCGACGCACATTATGTAATGATAGCGTAACTTTACCAATCCAACCTTCATGAACAACGATAGCTAg               >  2:2973319/1‑93 (MQ=255)
                                                                          aaaaaCATGAAAACCGCCTGCGAAAGATCGACGCACATTATGTAATGATAGCGTAACTTTACCAATCCAACCTTCATGAACAACGATAGCTAg               <  2:2756557/93‑1 (MQ=255)
                                                                           aaaaCATGAAAACCGCCTGCTAAAGATCGACGCACATTATGTAATGATAGCGTAACTTTACCAATCCAACCTTCATGAACAACGATAGCTAGt              >  1:1642397/1‑93 (MQ=255)
                                                                            aaaCATGAAAACCGCCTGCTAAAGATCGACGCACATTATGTAATGATAGCGTAACTTTACCAATCCAACCTTCATGAACAACGATAGCTAGTg             >  2:6140519/1‑93 (MQ=255)
                                                                              aCATGAAAACCGCCTGCTAAAGATCGACGCACATTATGTAATGATAGCGTAACTTTACCAATCCAACCTTCATGAACAACGATAGCTAGTGCa           <  1:9333446/93‑1 (MQ=255)
                                                                               cATGAAAACCGCCTGCTAAAGATCGACGCGCATTATGTAATGATAGCGTAACTTTACCAATCCAACCTTCATGAACAACGATAGCTAGTGCaa          <  1:4753738/93‑1 (MQ=255)
                                                                               cATGAAAACCGCCTGCTAAAGATCGACGCACATTATGTAATGATAGCGTAACTTTACCAATCCAACCTTCATGAACAACGATAGCTAGTGCaa          <  1:392194/93‑1 (MQ=255)
                                                                                 tGAAAACCGCCTGCTAAAGATCGACGCACATTATGTAATGATAGCGTAACTTTACCAATCCAACCTTCATGAACAACGATAGCTAGTGCaata        <  1:682039/93‑1 (MQ=255)
                                                                                  gAAAACCGCCTGCTAAAGATCGACGCACATTATGTAATGATAGCGTAACTTTACCAATCCAACCTTCATGAACAACGATAGCTAGTGCaatat       >  1:2598349/1‑92 (MQ=255)
                                                                                    aaaCCGCCTGCTAAAGATCGACGCACATTATGTAATGATAGCGTAACTTTACCAATCCAACCTTCATGAACAACGATAGCTAGTGCAATAAtt     >  2:650485/1‑93 (MQ=255)
                                                                                     aaCCGCCTGCTAAAGATCGACGCACATTATGTAATGATAGCGTAACTTTACCAATCCAACCTTCATGAACAACGATAGCTAGTGCAATAATTc    >  1:5807349/1‑93 (MQ=255)
                                                                                     aaCCGCCTGCTAAAGATCGACGCACATTATGTAATGATAGCGTAACTTTACCAATCCAACCTTCATGAACAACGATAGCTAGTGCAATAATTc    >  1:7528924/1‑93 (MQ=255)
                                                                                      aCCGCCTGCTAAAGATCGACGCACATTATGTAATGATAGCGTAACTTTACCAATCCAACCTTCATGAACAACGATAGCTAGTGCAATAATTcc   <  1:2415941/93‑1 (MQ=255)
                                                                                       ccGCCTGCTAAAGATCGACGCACATTATGTAATGATAGCGTAACTTTACCAATCCAACCTTCATGAACAACGATAGCTAGTGCAATAATTCCa  <  2:7769026/93‑1 (MQ=255)
                                                                                       ccGCCTGCTAAAGATCGACGCACATTATGTAATGATAGCGTAACTTTACCAATCCAACCTTCATGAACAACGATAGCTAGTGCAATAATTCCa  >  1:8292052/1‑93 (MQ=255)
                                                                                          |                                                                                         
GACGTTGGTCCAGATATAAATCCCAGGATAATAACTATTCCCGTAGAATATAAACTAATAGCAGATGTGGAAATAAAAACATGAAAACCGTCTGCTAAAGATCGACGCACATTATGTAATGATAGCGTAACTTTACCAATCCAACCTTCATGAACAACGATAGCTAGTGCAATAATTCCA  >  NC_000913/2106870‑2107049

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: