Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 266,105 A→G intergenic (‑328/+303) yafY ← / ← yafZ hypothetical protein/hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913266,1050AG99.6% 823.6 / ‑5.0 257intergenic (‑328/+303)yafY/yafZhypothetical protein/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base A (1/0);  new base G (147/109);  total (148/109)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.77e-01

Only 100 of 272 total aligned reads displayed.

TACTCCAGGTCCAGATACATCAGCCGCTCACGAAAATCACGCCGCAGCGTGCGCACCGACACACCAAACTCAGCGGCAAGCTTACGCACACTCAGCGTTTCCCCTGCCACCAGACGGCTGATTATCAGTGACAGCCTGACAGCCAGCCGGTCATGGCGGCGTTCTGCCTGTGTCATGAG  >  NC_000913/266016‑266194
                                                                                         |                                                                                         
 aCTCCAGGTCCAGATACATCAGCCGCTCACGAAAATCACGCCGCAGCGTGCGCACCGACACACCAAACTCAGCGGCAAGCTTACGCACGCTCa                                                                                       >  1:7643745/1‑93 (MQ=255)
  cTCCAGGTCCAGATACATCAGCCGCTCACGAAAATCACGCCGCAGCGTGCGCACCGACACACCAAACTCAGCGGCAAGCTTACGCACGCTCAg                                                                                      <  1:9165578/93‑1 (MQ=255)
        gTCCAGATACATCAGCCGCTCACGAAAATCACGCCGCAGCGTGCGCACCGACACACCAAACTCAGCGGCAAGCTTACGCACGCTCAGCGTTTc                                                                                >  1:6360309/1‑93 (MQ=255)
        gTCCAGATACATCAGCCGCTCACGAAAATCACGCCGCAGCGTGCGCACCGACACACCAAACTCAGCGGCAAGCTTACGCACGCTCAGCGTTTc                                                                                >  1:4902114/1‑93 (MQ=255)
         tCCAGATACATCAGCCGCTCACGAAAATCACGCCGCAGCGTGCGCACCGACACACCAAACTCAGCGGCAAGCTTACGCACGCTCAGCGTTTcc                                                                               >  2:9798470/1‑93 (MQ=255)
         tCCAGATACATCAGCCGCTCACGAAAATCACGCCGCAGCGTGCGCACCGACACACCAAACTCAGCGGCAAGCTTACGCACGCTCAGCGTTTcc                                                                               <  1:4368634/93‑1 (MQ=255)
         tCCAGATACATCAGCCGCTCACGAAAATCACGCCGCAGCGTGCGCACCGACACACCAAACTCAGCGGCAAGCTTACGCACGCTCAGCGTTTcc                                                                               >  2:9261189/1‑93 (MQ=255)
          ccAGATACATCAGCCGCTCACGAAAATCACGCCGCAGCGTGCGCACCGACACACCAAACTCAGCGGCAAGCTTACGCACGCTCAGCGTTTccc                                                                              >  1:223045/1‑93 (MQ=255)
          ccAGATACATCAGCCGCTCACGAAAATCACGCCGCAGCGTGCGCACCGACACACCAAACTCAGCGGCAAGCTTACGCACGCTCAGCGTTTccc                                                                              >  1:7256081/1‑93 (MQ=255)
          ccAGATACATCAGCCGCTCACGAAAATCACGCCGCAGCGTGCGCACCGACACACCAAACTCAGCGGCAAGCTTACGCACGCTCAGCGTTTccc                                                                              >  2:5009032/1‑93 (MQ=255)
           cAGATACATCAGCCGCTCACGAAAATCACGCCGCAGCGTGCGCACCGACCCACCAAACTCAGCCGCAAGCTTACGCACGCTCAGCGTTTcccc                                                                             <  2:6962987/93‑1 (MQ=255)
           cAGATACATCAGCCGCTCACGAAAATCACGCCGCAGCGTGCGCACCGACACACCAAACTCAGCGGCAAGCTTACGCACGCTCAGCGTTTcccc                                                                             <  1:8332341/93‑1 (MQ=255)
           cAGATACATCAGCCGCTCACGAAAATCACGCCGCAGCGTGCGCACCGACACACCAAACTCAGCGGCAAGCTTACGCACGCTCAGCGTTTcccc                                                                             <  2:3315977/93‑1 (MQ=255)
            aGATACATCAGCCGCTCACGAAAATCACGCCGCAGCGTGCGCACCGACACACCAAACTCAGCGGCAAGCTTACGCACGCTCAGCGTTTCCCCt                                                                            >  2:8150936/1‑93 (MQ=255)
            aGATACATCAGCCGCTCACGAAAATCACGCCGCAGCGTGCGCACCGACACACCAAACTCAGCGGCAAGCTTACGCACGCTCAGCGTTTCCCCt                                                                            <  1:707111/93‑1 (MQ=255)
            aGATACATCAGCCGCTCACGAAAATCACGCCGCAGCGTGCGCACCGACACACCAAACTCAGCGGCAAGCTTACGCACGCTCAGCGTTTCCCCt                                                                            >  1:5259406/1‑93 (MQ=255)
            aGATACATCAGCCGCTCACGAAAATCACGCCGCAGCGTGCGCACCGACACACCAAACTCAGCGGCAAGCTTACGCACGCTCAGCGTTTCCCCt                                                                            <  1:3767059/93‑1 (MQ=255)
             gATACATCAGCCGCTCACGAAAATCACGCCGCAGCTTGCGCACCGACACACCAAACTCAGCGGCAAGCTTACGCACGCTCAGCGTTTCCCCTg                                                                           >  1:1836167/1‑93 (MQ=255)
              aTACATCAGCCGCTCACGAAAATCACGCCGCAGCGTGCGCACCGACACACCAAACTCAGCGGCAAGCTTACGCACGCTCAGCGTTTCCCCTGc                                                                          >  1:9636694/1‑93 (MQ=255)
              aTACATCAGCCGCTCACGAAAATCACGCCGCAGCGTGCGCACCGACACACCAAACTCAGCGGCAAGCTTACGCACGCTCAGCGTTTCCCCTGc                                                                          >  2:5097296/1‑93 (MQ=255)
              aTACATCAGCCGCTCACGAAAATCACGCCGCAGCGTGCGCACCGACACACCAAACTCAGCGGCAAGCTTACGCACGCTCAGCGTTTCCCCTGc                                                                          >  2:5559941/1‑93 (MQ=255)
                  aTCAGCCGCTCACGAAAATCACGCCGCAGCGTGCGCACCGACACACCAAACTCAGCGGCAAGCTTACGCACGCTCAGCGTTTCCCCTGccacc                                                                      <  2:903136/93‑1 (MQ=255)
                   tCAGCCGCTCACGAAAATCACGCCGCAGCGTGCGCACCGACACACCAAACTCAGCGGCAAGCTTACGCACGCTCAGCGTTTCCCCTGccacca                                                                     >  1:993416/1‑93 (MQ=255)
                   tCAGCCGCTCACGAAAATCACGCCGCAGCGTGCGCACCGACACACCAAACTCAGCGGCAAGCTTACGCACGCTCAGCGTTTCCCCTGccacca                                                                     >  2:6147119/1‑93 (MQ=255)
                     aGCCGCTCACGAAAATCACGCCGCAGCGTGCGCACCGACACACCAAACTCAGCGGCAAGCTTACGCACGCTCAGCGTTTCCCCTGCCACCAGa                                                                   <  2:1570784/93‑1 (MQ=255)
                     aGCCGCTCACGAAAATCACGCCGCAGCGTGCGCACCGACACACCAAACTCAGCGGCAAGCTTACGCACGCTCAGCGTTTCCCCTGCCACCAGa                                                                   <  1:779092/93‑1 (MQ=255)
                     aGCCGCTCACGAAAATCACGCCGCAGCGTGCGCACCGACACACCAAACTCAGCGGCAAGCTTACGCACGCTCAGCGTTTCCCCTGCCACCAGa                                                                   <  1:1992853/93‑1 (MQ=255)
                      gCCGCTCACGAAAATCACGCCGCAGCGTGCGCACCGACACACCAAACTCAGCGGCAAGCTTACGCACGCTCAGCGTTTCCCCTGCCACCAGAc                                                                  <  2:1675385/93‑1 (MQ=255)
                      gCCGCTCACGAAAATCACGCCGCAGCGTGCGCACCGACACACCAAACTCAGCGGCAAGCTTACGCACGCTCAGCGTTTCCCCTGCCACCAGAc                                                                  >  2:4719776/1‑93 (MQ=255)
                      gCCGCTCACGAAAATCACGCCGCAGCGTGCGCACCGACACACCAAACTCAGCGGCAAGCTTACGCACGCTCAGCGTTTCCCCTGCCACCAGAc                                                                  <  2:8299120/93‑1 (MQ=255)
                      gCCGCTCACGAAAATCACGCCGCAGCGTGCGCACCGACACACCAAACTCAGCGGCAAGCTTACGCACGCTCAGCGTTTCCCCTGCCACCAGAc                                                                  <  2:7323891/93‑1 (MQ=255)
                       ccGCTCACGAAAATCACGCCGCAGCGTGCGCACCGACACACCAAACTCAGCGGCAAGCTTACGCACGCTCAGCGTTTCCCCTGCCACCAGACg                                                                 <  1:1111104/93‑1 (MQ=255)
                         gCTCACGAAAATCACGCCGCAGCGTGCGCACCGACACACCAAACTCAGCGGCAAGCTTACGCACGCTCAGCGTTTCCCCTGCCACCAGACGGc                                                               >  2:8883627/1‑93 (MQ=255)
                           ccACGAAAATCGCGCCGCAGCGTGCGCACCGACACGCCAAACGCAGCGGCAAGCTTCCTCACGCTGAGCGTTTCCCCTGCCGCCAGACGGCTg                                                             <  2:1805808/92‑1 (MQ=17)
                            cACGAAAATCACGCCGCAGCGTGCGCACCGACACACCAAACTCAGCGGCAAGCTTACGCACGCTCAGCGTTTCCCCTGCCACCAGACGGCTGa                                                            >  1:4326080/1‑93 (MQ=255)
                               gAAAATCACGCCGCAGCGTGCGCACCGACACACCAAACTCAGCGGCAAGCTTACGCACGCTCAGCGTTTCCCCTGCCACCAGACGGCTGATTa                                                         <  1:3130077/93‑1 (MQ=255)
                                aaaaTCACGCCGCAGCGTGCGCACCGACACACCAAACTCAGCGGCAAGCTTACGCACGCTCAGCGTTTCCCCTGCCACCAGACGGCTGATTAt                                                        >  1:1066059/1‑93 (MQ=255)
                                aaaaTCACGCCGCAGCGTGCGCACCGACACACCAAACTCAGCGGCAAGCTTACGCACGCTCAGCGTTTCCCCTGCCACCAGACGGCTGATTAt                                                        >  2:4608460/1‑93 (MQ=255)
                                aaaaTCACGCCGCAGCGTGCGCACCGACACACCAAACTCAGCGGCAAGCTTACGCACGCTCAGCGTTTCCCCTGCCACCAGACGGCTGATTAt                                                        >  1:7360183/1‑93 (MQ=255)
                                 aaaTCACGCCGCAGCGTGCGCACCGACACACCAAACTCAGCGGCAAGCTTACGCACGCTCAGCGTTTCCCCTGCCACCAGACGGCTGATTATc                                                       >  1:551796/1‑93 (MQ=255)
                                 aaaTCACGCCGCAGCGTGCGCACCGACACACCAAACTCAGCGGCAAGCTTACGCACGCTCAGCGTTTCCCCTGCCACCAGACGGCTGATTATc                                                       >  1:5119605/1‑93 (MQ=255)
                                  aaTCACGCCGCAGCGTGCTCACCGACACACCAAACTCAGCGGCAAGCTTACGCACGCTCAGCGTTTCCCCTGCCACCAGACGGCTGATTATCa                                                      <  1:4861378/93‑1 (MQ=255)
                                   aTCACGCCGCAGCGTGCGCACCGACACACCAAACTCAGCGGCAAGCTTACGCACGCTCAGCGTTTCCCCTGCCACCAGACGGCTGATTATCAg                                                     <  1:6426011/93‑1 (MQ=255)
                                   aTCACGCCGCAGCGTGCGCACCGACACACCAAACTCAGCGGCAAGCTTACGCACGCTCAGCGTTTCCCCTGCCACCAGACGGCTGATTATCAg                                                     <  2:8552172/93‑1 (MQ=255)
                                   aTCACGCCGCAGCGTGCGCACCGACACACCAAACTCAGCGGCAAGCTTACGCACGCTCAGCGTTTCCCCTGCCACCAGACGGCTGATTATCAg                                                     <  1:8278223/93‑1 (MQ=255)
                                   aTCACGCCGCAGCGTGCGCACCGACACACCAAACTCAGCGGCAAGCTTACGCACGCTCAGCGTTTCCCCTGCCACCAGACGGCTGATTATCAg                                                     <  2:4326527/93‑1 (MQ=255)
                                       cgccgcAGCGTGCGCACCGACACACCAAACTCAGCGGCAAGCTTACGCACGCTCAGCGTTTCCCCTGCCACCAGACGGCTGATTATCAGtgac                                                 <  2:6295589/93‑1 (MQ=255)
                                        gccgcAGCGTGCGCACCGACACACCAAACTCAGCGGCAAGCTTACGCACGCTCAGCGTTTCCCCTGCCACCAGACGGCTGATTATCAGtgaca                                                <  1:2163183/93‑1 (MQ=255)
                                          cgcAGCGTGCGCACCGACACACCAAACTCAGCGGCAAGCTTACGCACGCTCAGCGTTTCCCCTGCCACCAGACGGCTGATTATCAGtgacagc                                              >  1:3063695/1‑93 (MQ=255)
                                           gcAGCGTGCGCACCGACACACCAAACTCAGCGGCAAGCTTACGCACGCTCAGCGTTTCCCCTGCCACCATACGGCTGATTATCAGtgacagcc                                             >  2:7292762/1‑93 (MQ=255)
                                           gcAGCGTGCGCACCGACACACCAAACTCAGCGGCAAGCTTACGCACGCTCAGCGTTTCCCCTGCCACCAGACGGCTGATTATCAGtgacagcc                                             <  1:5712478/93‑1 (MQ=255)
                                             aGCGTGCGCACCGACACACCAAACTCAGCGGCAAGCTTACGCACGCTCAGCGTTTCCCCTGCCACCAGACGGCTGATTATCAGtgacagcctg                                           >  1:2387669/1‑93 (MQ=255)
                                               cGTGCGCACCGACACACCAAACTCAGCGGCAAGCTTACGCACGCTCAGCGTTTCCCCTGCCACCAGACGGCTGATTATCAGtgacagcctgac                                         <  1:6517919/93‑1 (MQ=255)
                                                 tGCGCACCGACACACCAAACTCAGCGGCAAGCTTACGCACGCTCAGCGTTTCCCCTGCCACCAGACGGCTGATTATCAGtgacagcctgacag                                       >  2:2383676/1‑93 (MQ=255)
                                                   cgcACCGACACACCAAACTCAGCGGCAAGCTTACGCACGCTCAGCGTTTCCCCTGCCACCAGACGGCTGATTATCAGtgacagcctgacagcc                                     <  2:3394641/93‑1 (MQ=255)
                                                    gcACCGACACACCAAACTCAGCGGCAAGCTTACGCACGCTCAGCGTTTCCCCTGCCACCAGACGGCTGATTATCAGTGACAGCCTGAcagcca                                    >  1:5823358/1‑93 (MQ=255)
                                                    gcACCGACACACCAAACTCAGCGGCAAGCTTACGCACGCTCAGCGTTTCCCCTGCCACCAGACGGCTGATTATCAGTGACAGCCTGAcagcca                                    >  1:4127729/1‑93 (MQ=255)
                                                    gcACCGACACACCAAACTCAGCGGCAAGCTTACGCACGCTCAGCGTTTCCCCTGCCACCAGACGGCTGATTATCAGTGACAGCCTGAcagcca                                    >  1:8475850/1‑93 (MQ=255)
                                                     cACCGACACACCAAACTCAGCGGCAAGCTTACGCACGCTCAGCGTTTCCCCTGCCACCAGACGGCTGATTATCAGTGACAGCCTGAcagccag                                   >  1:3582967/1‑93 (MQ=255)
                                                      aCCGACACACCAAACTCAGCGGCAAGCTTACGCACGCTCAGCGTTTCCCCTGCCACCAGACGGCTGATTATCAGTGACAGCCTGAcagccagc                                  >  1:1385125/1‑93 (MQ=255)
                                                       ccGACACACCAAACTCAGCGGCAAGCTTACGCACGCTCAGCGTTTCCCCTGCCACCAGACGGCTGATTATCAGTGACAGCCTGACagccagcc                                 >  2:7902173/1‑93 (MQ=255)
                                                       ccGACACACCAAACTCAGCGGCAAGCTTACGCACGCTCAGCGTTTCCCCTGCCACCAGACGGCTGATTATCAGTGACAGCCTGACagccagcc                                 <  1:7151753/93‑1 (MQ=255)
                                                       ccGACACACCAAACTCAGCGGCAAGCTTACGCACGCTCAGCGTTTCCCCTGCCACCAGACGGCTGATTATCAGTGACAGCCTGACagccagcc                                 <  2:7157912/93‑1 (MQ=255)
                                                       ccGACACACCAAACTCAGCGGCAAGCTTACGCACGCTCAGCGTTTCCCCTGCCACCAGACGGCTGATTATCAGTGACAGCCTGACagccagcc                                 >  1:2937435/1‑93 (MQ=255)
                                                        cGACACACCAAACTCAGCGGCAAGCTTACGCACGCTCAGCGTTTCCCCTGCCACCAGACGGCTGATTATCAGTGACAGCCTGACAGCCAGCCg                                <  1:2633376/93‑1 (MQ=255)
                                                        cGACACACCAAACTCAGCGGCAAGCTTACGCACGCTCAGCGTTTCCCCTGCCACCAGACGGCTGATTATCAGTGACAGCCTGACAGCCAGCCg                                <  1:8072199/93‑1 (MQ=255)
                                                        cGACACACCAAACTCAGCGGCAAGCTTACGCACGCTCAGCGTTTCCCCTGCCACCAGACGGCTGATTATCAGTGACAGCCTGACAGCCAGCCg                                <  2:3738836/93‑1 (MQ=255)
                                                           cacacCAAACTCAGCGGCAAGCTTACGCACGCTCAGCGTTTCCCCTGCCACCAGACGGCTGATTATCAGTGACAGCCTGACAGCCAGCCGGTc                             >  2:6316971/1‑93 (MQ=255)
                                                            acacCAAACTCAGCGGCAAGCTTACGCACGCTCAGCGTTTCCCCTGCCACCAGACGGCTGATTATCAGTGACAGCCTGACAGCCAGCCGGTCa                            <  1:6522510/93‑1 (MQ=255)
                                                            acacCAAACTCAGCGGCAAGCTTACGCACGCTCAGCGTTTCCCCTGCCACCAGACGGCTGATTATCAGTGACAGCCTGACAGCCAGCCGGTCa                            >  1:9207125/1‑93 (MQ=255)
                                                            acacCAAACTCAGCGGCAAGCTTACGCACGCTCAGCGTTTCCCCTGCCACCAGACGGCTGATTATCAGTGACAGCCTGACAGCCAGCCGGTCa                            <  1:8106395/93‑1 (MQ=255)
                                                            acacCAAACTCAGCGGCAAGCTTACGCACGCTCAGCGTTTCCCCTGCCACCAGACGGCTGATTATCAGTGACAGCCTGACAGCCAGCCGGTCa                            <  2:5317524/93‑1 (MQ=255)
                                                                cAACCTCAGCGGCAAGCTTACGCACGCTCAGCGTTTCCCCTGCCACCAGACGGCTGATTATCAGTGACAGCCTGACAGCCAGCCGGTCATggc                        <  1:2499909/93‑1 (MQ=255)
                                                                 aaaCTCAGCGGCAAGCTTACGCACGCTCAGCATTTCCCCTTCCACCAGACGGCTGATTATCAGTGACAGCCTGACACCCACCCGGCCCTggcg                       >  1:3493788/1‑93 (MQ=18)
                                                                  aaCTCAGCGGCAAGCTTACGCACGCTCAGCGTTTCCCCTGCCACCAGACGGCTGATTATCAGTGACAGCCTGACAGCCAGCCGGTCATggcgg                      >  1:6168048/1‑93 (MQ=255)
                                                                  aaCTCAGCGGCAAGCTTACGCACGCTCAGCGTTTCCCCTGCCACCAGACGGCTGATTATCAGTGACAGCCTGACAGCCAGCCGGTCATggcgg                      <  1:9090105/93‑1 (MQ=255)
                                                                  aaCTCAGCGGCAAGCTTACGCACGCTCAGCGTTTCCCCTGCCACCAGACGGCTGATTATCAGTGACAGCCTGACAGCCAGCCGGTCATggcgg                      >  2:3950027/1‑93 (MQ=255)
                                                                  aaCTCAGCGGCAAGCTTACGCACGCTCAGCGTTTCCCCTGCCACCAGACGGCTGATTATCAGTGACAGCCTGACAGCCAGCCGGTCATggcgg                      >  2:4779670/1‑93 (MQ=255)
                                                                   aCTCAGCGGCAAGCTTACGCACGCTCAGCGTTTCCCCTGCCACCAGACGGCTGATTATCAGTGACAGCCTGACAGCCAGCCGGTCATggcggc                     >  1:1230744/1‑93 (MQ=255)
                                                                     tCAGCGGCAAGCTTACGCACGCTCAGCGTTTCCCCTGCCACCAGACGGCTGATTATCAGTGACAGCCTGACAGCCAGCCGGTCATGGCGGCGt                   >  1:6926194/1‑93 (MQ=255)
                                                                     tCAGCGGCAAGCTTACGCACGCTCAGCGTTTCCCCTGCCACCAGACGGCTGATTATCAGTGACAGCCTGACAGCCAGCCGGTCATGGCGGCGt                   >  2:7750409/1‑93 (MQ=255)
                                                                       aGCGGCAAGCTTACGCACGCTCAGCGTTTCCCCTGCCACCAGACGGCTGATTATCAGTGACAGCCTGACAGCCAGCCGGTCATTGCGGCGTTc                 >  1:6815007/1‑93 (MQ=255)
                                                                           gCAAGCTTACGCACGCTCAGCGTTTCCCCTGCCACCAGACGGCTGATTATCAGTGACAGCCTGACAGCCAGCCGGTCATGGCGGCGTTCTGcc             <  1:5453727/93‑1 (MQ=255)
                                                                             aaGCTTACGCACGCTCAGCGTTTCCCCTGCCACCAGACGGCTGATTATCAGTGACAGCCTGACAGCCAGCCGGTCATGGCGGCGTTCTGCCtg           <  2:6458161/93‑1 (MQ=255)
                                                                             aaGCTTACGCACGCTCAGCGTTTCCCCTGCCACCAGACGGCTGATTATCAGTGACAGCCTGACAGCCAGCCGGTCATGGCGGCGTTCTGCCtg           <  1:5044685/93‑1 (MQ=255)
                                                                              aGCTTACGCACGCTCAGCGTTTCCCCTGCCACCAGACGGCTGATTATCAGTGACAGCCTGACAGCCAGCCGGTCATGGCGGCGTTCTGCCtgt          <  1:6851457/93‑1 (MQ=255)
                                                                              aGCTTACGCACGCTCAGCGTTTCCCCTGCCACCAGACGGCTGATTATCAGTGACAGCCTGACAGCCAGCCGGTCATGGCGGCGTTCTGCCtgt          >  1:2853497/1‑93 (MQ=255)
                                                                               gCTTACGCACGCTCAGCGTTTCCCCTGCCACCAGACGGCTGATTATCAGTGACAGCCTGACAGCCAGCCGGTCATGGCGGCGTTCTGCCtgtg         >  1:8654572/1‑93 (MQ=255)
                                                                               gCTTACGCACGCTCAGCGTTTCCCCTGCCACCAGACGGCTGATTATCAGTGACAGCCTGACAGCCAGCCGGTCATGGCGGCGTTCTGCCtgtg         >  1:3345624/1‑93 (MQ=255)
                                                                               gCTTACGCACGCTCAGCGTTTCCCCTGCCACCAGACGGCTGATTATCAGTGACAGCCTGACAGCCAGCCGGTCATGGCGGCGTTCTGCCtgtg         >  2:6883978/1‑93 (MQ=255)
                                                                               gCTTACGCACGCTCAGCGTTTCCCCTGCCACCAGACGGCTGATTATCAGTGACAGCCTGACAGCCAGCCGGTCATGGCGGCGTTCTGCCtgtg         >  2:9661440/1‑93 (MQ=255)
                                                                                 ttACGCACGCTCAGCGTTTCCCCTGCCACCAGACGGCTGATTATCAGTGACAGCCTGACAGCCAGCCGGTCATGGCGGCGTTCTGCCTGTGTc       >  2:2493212/1‑93 (MQ=255)
                                                                                 ttACGCACGCTCAGCGTTTCCCCTGCCACCAGACGGCTGATTATCAGTGACAGCCTGACAGCCAGCCGGTCATGGCGGCGTTCTGCCTGTGTc       <  2:3462590/93‑1 (MQ=255)
                                                                                  tACGCACGCTCAGCGTTTCCCCTGCCACCAGACGGCTGATTATCAGTGACAGCCTGACAGCCATCCGGTCATGGCGGCGTTCTGCCTGTGTCa      >  2:7837736/1‑93 (MQ=255)
                                                                                     gCACGCTCAGCGTTTCCCCTGCCACCAGACGGCTGATTATCAGTGACAGCCTGACAGCCAGCCGGTCATGGCGGCGTTCTGCCTGTGTCATga   <  1:1590926/93‑1 (MQ=255)
                                                                                     gCACGCTCAGCGTTTCCCCTGCCACCAGACGGCTGATTATCAGTGACAGCCTGACAGCCAGCCGGTCATGGCGGCGTTCTGCCTGTGTCATga   >  2:9131956/1‑93 (MQ=255)
                                                                                      cacgCTCAGCGTTTCCCCTGCCACCAGACGGCTGATTATCAGTGACAGCCTGACAGCCAGCCGGTCATGGCGGCGTTCTGCCTGTGTCCTggg  >  2:5737231/1‑91 (MQ=255)
                                                                                      cacgCTCAGCGTTTCCCCTGCCACCAGACGGCTGATTATCAGTGACAGCCTGACAGCCAGCCGGTCATGGCGGCGTTCTGCCTGTGTCATgag  >  2:3205654/1‑93 (MQ=255)
                                                                                      cacgCTCAGCGTTTCCCCTGCCACCAGACGGCTGATTATCAGTGACAGCCTGACAGCCAGCCGGTCATGGCGGCGTTCTGCCTGTGTCATgag  >  2:9357841/1‑93 (MQ=255)
                                                                                      cacgCTCAGCGTTTCCCCTGCCACCAGACGGCTGATTATCAGTGACAGCCTGACAGCCAGCCGGTCATGGCGGCGTTCTGCCTGTGTCATgag  >  2:2716069/1‑93 (MQ=255)
                                                                                         |                                                                                         
TACTCCAGGTCCAGATACATCAGCCGCTCACGAAAATCACGCCGCAGCGTGCGCACCGACACACCAAACTCAGCGGCAAGCTTACGCACACTCAGCGTTTCCCCTGCCACCAGACGGCTGATTATCAGTGACAGCCTGACAGCCAGCCGGTCATGGCGGCGTTCTGCCTGTGTCATGAG  >  NC_000913/266016‑266194

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: