BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,317,837	T→C	A4A (GCA→GCG)	rcsC ←	RcsC

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,317,837	0	T	C	100.0%	1294.8 / NA	398	A4A (GCA→GCG)	rcsC	RcsC
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (179/219); total (179/219)

Only 100 of 408 total aligned reads displayed.

CTGACGAATTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAATGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAGGTGACCGAT  >  NC_000913/2317747‑2317926

 tGACGAATTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGct                                                                                        >  2:4201699/1‑93 (MQ=255)

 tGACGAATTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGACAACGct                                                                                        >  2:9532657/1‑93 (MQ=255)

  gACGAATTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGctc                                                                                       >  1:3864895/1‑93 (MQ=255)

  gACGAATTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGctc                                                                                       >  1:185709/1‑93 (MQ=255)

    cGAATTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTg                                                                                     >  1:7807770/1‑93 (MQ=255)

     gattttCCGATTCTCGCCGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACGAACTCCAACGTTCTGa                                                                                    >  2:8989533/4‑93 (MQ=255)

      aaTTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGaa                                                                                   <  2:6689327/93‑1 (MQ=255)

      aaTTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGaa                                                                                   >  1:7386178/1‑93 (MQ=255)

        tttCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACa                                                                                 <  1:4991826/93‑1 (MQ=255)

        tttCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACa                                                                                 <  1:3775375/93‑1 (MQ=255)

           ccGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGt                                                                              >  2:1604383/1‑93 (MQ=255)

           ccGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGt                                                                              >  2:9184189/1‑93 (MQ=255)

            cGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTa                                                                             >  2:4862947/1‑93 (MQ=255)

            cGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTa                                                                             <  1:6373137/93‑1 (MQ=255)

             gATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAg                                                                            <  2:4410351/93‑1 (MQ=255)

              aTTCTCGCTTATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAgc                                                                           <  1:5293010/93‑1 (MQ=255)

              aTTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAgc                                                                           >  2:2883432/1‑93 (MQ=255)

               ttCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAACCAACAGCCAGAGCACTAACGCCAACCCTCTAAACATGTAccg                                                                          >  2:5692279/1‑93 (MQ=255)

                  tcGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGa                                                                       >  1:6803864/1‑93 (MQ=255)

                    gCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCCCTACCGCCAACGCTCTGAACATGTAGCGCGAgg                                                                     <  2:5406605/93‑1 (MQ=255)

                    gCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAgg                                                                     >  1:6554825/1‑93 (MQ=255)

                     cTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGc                                                                    >  1:3120586/1‑93 (MQ=255)

                       gATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCtt                                                                  >  2:8128373/1‑93 (MQ=255)

                       gATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCtt                                                                  <  2:6877787/93‑1 (MQ=255)

                       gATGTAACGCATGAACGATGTAAAAAGCGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCtt                                                                  <  1:9319161/93‑1 (MQ=255)

                         tGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTc                                                                <  1:4804836/93‑1 (MQ=255)

                         tGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTc                                                                <  1:2831156/93‑1 (MQ=255)

                         tGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTc                                                                <  1:6089330/93‑1 (MQ=255)

                         tGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTc                                                                <  1:1028636/93‑1 (MQ=255)

                          gTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCa                                                               >  1:8225661/1‑93 (MQ=255)

                           tAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAg                                                              <  1:4052900/93‑1 (MQ=255)

                           tAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAg                                                              <  1:6872989/93‑1 (MQ=255)

                           tAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAg                                                              <  1:6695401/93‑1 (MQ=255)

                            aaCGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAgg                                                             >  1:9214959/1‑93 (MQ=255)

                            aaCGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAgg                                                             >  2:6390062/1‑93 (MQ=255)

                              cGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGt                                                           <  1:7078541/93‑1 (MQ=255)

                              cGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGt                                                           <  1:5823272/93‑1 (MQ=255)

                               gCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGtt                                                          <  1:1532359/93‑1 (MQ=255)

                                 aTTAACGATGTAAATAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGt                                                        <  1:5462886/93‑1 (MQ=255)

                                 aTTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGt                                                        >  2:7819305/1‑93 (MQ=255)

                                   tAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTAc                                                      <  2:5628890/93‑1 (MQ=255)

                                   tAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTAc                                                      >  1:3483012/1‑93 (MQ=255)

                                   tAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTATGAACATGTAGCGCGAGGCTTTCAGGGTTGTAc                                                      >  1:9676145/1‑93 (MQ=255)

                                    aaCGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACg                                                     >  1:9895303/1‑93 (MQ=255)

                                     aCGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGa                                                    >  1:2186100/1‑93 (MQ=255)

                                     aCGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGa                                                    >  1:7855491/1‑93 (MQ=255)

                                      cGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGaa                                                   <  2:7439322/93‑1 (MQ=255)

                                      cGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGaa                                                   >  2:8795647/1‑93 (MQ=255)

                                       gATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGaaa                                                  >  2:3888814/1‑93 (MQ=255)

                                          gTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAaaga                                               <  1:4623134/93‑1 (MQ=255)

                                           tAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAaagaa                                              <  1:4229111/93‑1 (MQ=255)

                                           tAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAaagaa                                              >  2:5926734/1‑93 (MQ=255)

                                           gaaaaaaCGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAaagaa                                              <  1:1651327/92‑1 (MQ=255)

                                             aaaaaCGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGc                                            >  1:8523210/1‑93 (MQ=255)

                                             aaaaaCGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGc                                            <  2:7597177/93‑1 (MQ=255)

                                              aaaaCGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCa                                           >  2:7324803/1‑93 (MQ=255)

                                                aaCGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAg                                         >  1:1769546/1‑93 (MQ=255)

                                                 aCGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAGCGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAgg                                        <  2:9696916/93‑1 (MQ=255)

                                                  cGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGt                                       <  1:246677/93‑1 (MQ=255)

                                                   ggATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTa                                      >  1:9516356/1‑93 (MQ=255)

                                                   ggATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTa                                      >  1:8012476/1‑93 (MQ=255)

                                                    gATGAAAAAGGAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTAt                                     <  1:7199357/93‑1 (MQ=255)

                                                    gATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTAt                                     >  1:2671333/1‑93 (MQ=255)

                                                    gATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTAt                                     <  2:468994/93‑1 (MQ=255)

                                                    gATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTAt                                     <  2:1248114/93‑1 (MQ=255)

                                                      tGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTAttt                                   <  2:3195261/93‑1 (MQ=255)

                                                       gAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTc                                  <  1:3450549/93‑1 (MQ=255)

                                                       gAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTc                                  <  1:9015777/93‑1 (MQ=255)

                                                          aaaGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCaaa                               <  2:3701777/93‑1 (MQ=255)

                                                          aaaGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCaaa                               <  2:864779/93‑1 (MQ=255)

                                                          aaaGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCaaa                               >  2:5220805/1‑93 (MQ=255)

                                                          aaaGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCaaa                               <  2:8616791/93‑1 (MQ=255)

                                                          aaaGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTCCAGGGTTGTACGAAAAGAAGCAAGGTATTTCaaa                               >  1:5598335/1‑93 (MQ=255)

                                                           aaGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAg                              <  2:8869725/93‑1 (MQ=255)

                                                           aaGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAg                              <  2:5803952/93‑1 (MQ=255)

                                                            aGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAgg                             >  1:6040068/1‑93 (MQ=255)

                                                             gCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAggg                            >  1:6229498/1‑93 (MQ=255)

                                                             gCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAggg                            <  2:1157651/93‑1 (MQ=255)

                                                              caaccaacAGCCAGAGCACTAACGCCAACGCTCGGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAgggg                           <  1:7667415/93‑1 (MQ=255)

                                                              cAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAgggg                           <  1:9388339/93‑1 (MQ=255)

                                                               aaTCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGc                          >  1:1226352/1‑93 (MQ=255)

                                                                 tCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGa                        <  2:2740919/93‑1 (MQ=255)

                                                                  cAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGaa                       <  2:1816141/93‑1 (MQ=255)

                                                                  cAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGaa                       <  2:9130863/93‑1 (MQ=255)

                                                                  cAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGaa                       >  1:7587633/1‑93 (MQ=255)

                                                                   aaCAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAg                      <  1:2997884/93‑1 (MQ=255)

                                                                      aGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTc                   <  2:8432095/93‑1 (MQ=255)

                                                                       gCCAGAGCACTAACGCCAGCGCTCTGAGCATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTcc                  <  2:304833/93‑1 (MQ=255)

                                                                            agCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTc             <  2:9857239/93‑1 (MQ=255)

                                                                             gCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCa            <  1:3589838/93‑1 (MQ=255)

                                                                             gCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGCTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTcg            >  2:4010342/1‑92 (MQ=255)

                                                                               aCTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAgg          <  1:8712042/93‑1 (MQ=255)

                                                                               aCTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAgg          <  2:6148446/93‑1 (MQ=255)

                                                                                  aaCGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAGGTGa       <  1:8354423/93‑1 (MQ=255)

                                                                                  aaCGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAGGTGa       <  2:1529854/93‑1 (MQ=255)

                                                                                  aaCGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAGGTGa       >  1:198488/1‑93 (MQ=255)

                                                                                  aaCGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAGGCGa       >  2:2475575/1‑93 (MQ=255)

                                                                                   aCGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAGGTGAc      <  1:8884420/93‑1 (MQ=255)

                                                                                   aCGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAGGTGAc      <  1:4708669/93‑1 (MQ=255)

                                                                                       cAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAGGTGACCGAt  <  2:3536175/93‑1 (MQ=255)

CTGACGAATTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAATGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAGGTGACCGAT  >  NC_000913/2317747‑2317926

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`