BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	277,917	A→G	L41P (CTG→CCG)	afuC ←	AfuC

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	277,917	0	A	G	100.0%	1114.1 / NA	347	L41P (CTG→CCG)	afuC	AfuC
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (179/168); total (179/168)

Only 100 of 377 total aligned reads displayed.

CCATCAATGAAAATTTGCCCTTCGCTCGGTTTTTCCAGCCCGGCAACCAGGCGCAAAATAGTGGTTTTGCCGCAGCCGGACGGGCCGAGCAGCGTCACCATTTG‑C‑CCCTGCGGGATGGTGAGGTTGATATTGTCGATTACCGTATTACTGCCAAATCGTTTAGTGACGTTGCGCAGTTCA  >  NC_000913/277827‑278006

ccATGAATGAAAATTTGCCCTTCGCTCGGTTTTTCCAGCCCGGCAACCAGGCGCAAAATAGTGGTTTTGCCGCAGCCGGACGGGCCGagcggc                                                                                           >  1:9918994/1‑93 (MQ=255)

   tCAATGAAAATTTGCCCTTCGCTCGATATTTCCAGCCCGGCAACCAGGCGCAAAATAGTGGTTTTGCCGCAGCCGGACGGGCCGAGCGGCGTc                                                                                        <  1:4064569/93‑1 (MQ=255)

    cAATGAAAATTTGCCCTTCGCTCGGTTTTTCCAGCCCGGCAACCAGGCGCAAAATAGTGGTTTTGCCGCAGCCGGACGGGCCGAGCGGCGTCa                                                                                       >  1:8269461/1‑93 (MQ=255)

     aaTGAAAATTTGCCCTTCGCTCGGTTTTTCCAGCCCGGCAACCAGGCGCAAAATAGTGGTTTTGCCGCAGCCGGACGGGCCGAGCGGCGTCAc                                                                                      >  1:7860/1‑93 (MQ=255)

      aTGAAAATTTGCCCTTCGCTCGGTTTTTCCAGCCCGGCAACCAGGCGCAAAATAGTGGTTTTGCCGCAGCCGGACGGGCCGAGCGGCGTCAcc                                                                                     >  1:7033054/1‑93 (MQ=255)

      aTGAAAATTTGCCCTTCGCTCGGTTTTTCCAGCCCGGCAACCAGGCGCAAAATAGTGGTTTTGCCGCAGCCGGACGGGCCGAGCGGCGTCAcc                                                                                     >  2:2609751/1‑93 (MQ=255)

       tGAAAATTTGCCCTTCGCTCGGTTTTTCCAGCCCGGCAACCAGGCGCAAAATAGTGGTTTTGCCGCAGCCGGACGGGCCGAGCGGCGTCACCa                                                                                    <  2:2421046/93‑1 (MQ=255)

         aaaaTTTGCCCTTCGCTCGGTTTTTCCAGCCCGGCAACCAGGCGCAAAATAGTGGTTTTGCCGCAGCCGGACGGGCCGAGCGGCGTCACCAtt                                                                                  <  2:5835308/93‑1 (MQ=255)

         aaaaTTTGCCCTTCGCTCGGTTTTTCCAGCCCGGCAACCAGGCGCAAAATAGTGGTTTTGCCGCAGCCGGACGGGCCGAGCGGCGTCACCAtt                                                                                  <  1:8125203/93‑1 (MQ=255)

           aaTTTGCCCTTCGCTCGGTTTTTCCAGCCCGGCAACCAGGCGCAAAATAGTGGTTTTGCCGCAGCCGGACGGGCCGAGCGGCGTCACCATTTg                                                                                >  1:6814149/1‑93 (MQ=255)

            aTTTGCCCTTCGCTCGGTTTTTCCAGCCCGGCAACCAGGCGCAAAATAGTGGTTTTGCCGCAGCCGGACGGGCCGAGCGGCGTCACCATTTG‑c                                                                              <  1:7401135/93‑1 (MQ=255)

              ttGCCCTTCGCTCGGTTTTTCCAGCCCGGCAACCAGGCGCAAAATAGTGGTTTTGCCGCAGCCGGACGGGCCGAGCGGCGTCACCATTTG‑c‑cc                                                                           <  1:1124817/93‑1 (MQ=255)

              ttGCCCTTCGCTCGGTTTTTCCAGCCCGGCAACCAGGCGCAAAATAGTGGTTTTGCCGCAGCCGGACGGGCCGAGCGGCGTCACCATTTG‑c‑cc                                                                           >  1:2296727/1‑93 (MQ=255)

               tGCCCTTCGCTCGGTTTTTCCAGCCCGGCAACCAGGCGCAAAATAGTGGTTTTGCCGCAGCCGGACGGGCCGAGCGGCGTCACCATTTG‑c‑ccc                                                                          <  2:5408798/93‑1 (MQ=255)

                gCCCTTCGCTCGGTTTTTCCAGCCCGGCAACCAGGCGCAAAATAGTGGTTTTGCCGCAGCCGGACGGGCCGAGCGGCGTCACCATTTG‑C‑CCCt                                                                         <  1:5209680/93‑1 (MQ=255)

                  ccTTCGCTCGGTTTTTCCAGCCCGGCAACCAGGCGCAAAATAGTGGTTTTGCCGCAGCCGGACGGGCCGAGCGGCGTCACCATTTG‑c‑cccctg                                                                       >  1:1480038/1‑90 (MQ=255)

                  ccTTCGCTCGGTTTTTCCAGCCCGGCAACCAGGCGCAAAATAGTGGTTTTGCCGCAGCCGGACGGGCCGAGCGGCGTCACCATTTG‑c‑cccctg                                                                       >  1:9062612/1‑90 (MQ=255)

                  ccTTCGCTCGGTTTTTCCAGCCCGGCAACCAGGCGCAAAATAGTGGTTTTGCCGCAGCCGGACGGGCCGAGCGGCGTCACCATTTG‑CACCCTg                                                                        >  1:1036814/1‑93 (MQ=255)

                     tCGCTCGGTTTTTCCAGCCCGGCAACCAGGCGCAAAATAGTGGTTTTGCCGCAGCCGGACGGGCCGAGCGGCGTCACCATTTGCC‑CCCTGCgg                                                                     >  1:6569873/1‑93 (MQ=255)

                       gCTCGGTTTTTCCAGCCCGGCAACCAGGCGCAAAATAGTGGTTTTGCCGCAGCCGGACGGGCCGAGCGGCGTCACCATTTGCC‑CCCTGCGGGa                                                                   <  2:5653284/93‑1 (MQ=39)

                       gCTCGGTTTTTCCAGCCCGGCAACCAGGCGCAAAATAGTGGTTTTGCCGCAGCCGGACGGGCCGAGCGGCGTCACCATTTGCC‑CCCTGCGGGa                                                                   >  2:6749666/1‑93 (MQ=255)

                        cTCGGTTTTTCCAGCCCGGCAACCAGGCGCAAAATAGTGGTTTTGCCGCAGCCGGACGGGCCGAGCGGCGTCACCATTTGCC‑CCCTGCGGGAt                                                                  <  2:8276959/93‑1 (MQ=39)

                        cTCGGTTTTTCCAGCCCGGCAACCAGGCGCAAAATAGTGGTTTTGCCGCAGCCGGACGGGCCGAGCGGCGTCACCATTTG‑C‑CCCTGCGGGATg                                                                 >  1:5155014/1‑93 (MQ=255)

                          cGGTTTTTCCAGCCCGGCAACCAGGCGCAAAATAGTGGTTTTGCCGCAGCCGGACGGGCCGAGCGGCGTCACCATTTGCC‑CCCTGCGGGATgg                                                                >  1:3573244/1‑93 (MQ=255)

                          cGGTTTTTCCAGCCCGGCAACCAGGCGCAAAATAGTGGTTTTGCCGCAGCCGGACGGGCCGAGCGGCGTCACCATTTGCC‑CCCTGCGGGATgg                                                                <  1:9950499/93‑1 (MQ=39)

                            gTTTTTCCAGCCCGGCAACCAGGCGCAAAATAGTGGTTTTGCCGCAGCCGGACGGGCCGAGCGGCGTCACCATTTGCC‑CCCTGCGGGATGGTg                                                              >  1:9674436/1‑93 (MQ=255)

                            gTTTTTCCAGCCCGGCAACCAGGCGCAAAATAGTGGTTTTGCCGCAGCCGGACGGGCCGAGCGGCGTCACCATTTGCC‑CCCTGCGGGATGGTg                                                              >  2:9098053/1‑93 (MQ=255)

                            gTTTTTCCAGCCCGGCAACCAGGCGCAAAATAGTGGTTTTGCCGCAGCCGGACGGGCCGAGCGGCGTCACCATTTG‑C‑CCCTGCGGGATGGTGa                                                             <  1:2653335/93‑1 (MQ=255)

                                ttCCAGCCCGGCAACCAGGCGCAAAATAGTGGTTTTGCCGCAGCCGGACGGGCCGAGCGGCGTCACCATTTGCC‑CCCTGCGGGATGGTGAGGt                                                          <  1:7767907/93‑1 (MQ=255)

                                  ccAGCCCGGCAACCAGGCGCAAAATAGTTGTTTTGCCGCAGCCGGACGGGCCGAGCGGCGTCACCATTTG‑C‑CCCTGCGGGATGGTGAGGTTGa                                                       <  1:4764220/93‑1 (MQ=255)

                                   cAGCCCGGCAACCAGGCGCAAAATAGTGGTTTTGCCGCAGCCGGACGGGCCGAGCGGCGTCACCATTTGCC‑CCCTGCGGGATGGTGAGGTTGa                                                       >  1:9198604/1‑93 (MQ=255)

                                      cccGGCAACCAGGCGCAAAATAGTGGTTTTGCCGCAGCCGGACGGGCCGAGCGGCGTCACCATTTGCC‑CCCTGCGGGATGGTGAGGTTGatat                                                    <  2:1388635/93‑1 (MQ=255)

                                        cGGCAACCAGGCGCAAAATAGTGGTTTTGCCGCAGCCGGACGGGCCGAGCGGCGTCACCATTTGCC‑CCCTGCGGGATGGTGAGGTTGATATTg                                                  <  1:4593236/93‑1 (MQ=255)

                                        cGGCAACCAGGCGCAAAATAGTGGTTTTGCCGCAGCCGGACGGGCCGAGCGGCGTCACCATTTGCC‑CCCTGCGGGATGGTGAGGTTGATATTg                                                  >  1:5596087/1‑93 (MQ=255)

                                        cGGCAACCAGGCGCAAAATAGTGGTTTTGCCGCAGCCGGACGGGCCGAGCGGCGTCACCATTTG‑C‑CCCTGCGGGATGGTGAGGTTGATATTGt                                                 <  1:2206335/93‑1 (MQ=255)

                                        cGGCAACCAGGCGCAAAATAGTGGTTTTGCCGCAGCCGGACGGGCCGAGCGGCGTCACCATTTG‑C‑CCCTGCGGGATGGTGAGGTTGATATTGt                                                 <  1:1737438/93‑1 (MQ=255)

                                        cGGCAACCAGGCGCAAAATAGTGGTTTTGCCGCAGCCGGACGGGCCGAGCGGCGTCACCATTTG‑C‑CCCTGCGGGATGGTGAGGTTGATATTGt                                                 <  1:4342962/93‑1 (MQ=255)

                                        cGGCAACCAGGCGCAAAATAGTGGTTTTGCCGCAGCCGGACGGGCCGAGCGGCGTCACCATTTG‑C‑CCCTGCGGGATGGTGAGGGTGATATTGt                                                 >  2:7625672/1‑93 (MQ=255)

                                         ggCAACCAGGCGCAAAATAGTGGTTTTGCCGCAGCCGGACGGGCCGAGCGGCGTCACCATTTG‑C‑CCCTGCGGGATGGTGAGGTTGATATTGTc                                                <  1:2436050/93‑1 (MQ=255)

                                          gCAACCAGGCGCAAAATAGTGGTTTTGCCGCAGCCGGACGGGCCGAGCGGCGTCACCATTTGCC‑CCCTGCGGGATGGTGAGGTTGATATTGTc                                                >  2:781226/1‑93 (MQ=255)

                                           cAACCAGGCGCAAAATAGTGGTTTTGCCGCAGCCGGACGGGCCGAGCGGCGTCACCATTTG‑C‑CCCTGCGGGATGGTGAGGTTGATATTGTCGa                                              <  2:7929990/93‑1 (MQ=255)

                                            aaCCAGGCGCAAAATAGTGGTTTTGCCGCAGCCGGACGGGCCGAGCGGCGTCACCATTTG‑C‑CCCTGCGGGATGGTGAGGTTGATATTGTCGAt                                             >  2:8499061/1‑93 (MQ=255)

                                            aaCCAGGCGCAAAATAGTGGTTTTGCCGCAGCCGGACGGGCCGAGCGGCGTCACCATTTG‑C‑CCCTGCGGGATGGTGAGGTTGATATTGTCGAt                                             <  1:845732/93‑1 (MQ=255)

                                             aCCAGGCGCAAAATAGTGGTTTTGCCGCAGCCGGACGGGCCGAGCGGCGTCACCATTTGCC‑CCCTGCGGGATGGTGAGGTTGATATTGTCGAt                                             <  2:1554420/93‑1 (MQ=255)

                                              ccAGGCGCAAAATAGTGGTTTTGCCGCAGCCGGACGGGCCGAGCGGCGTCACCATTTG‑C‑CCCTGCGGGATGGTGAGGTTGATATTGTCGATTa                                           >  2:6665560/1‑93 (MQ=255)

                                               cAGGCGCAAAATAGTGGTTTTGCCGCAGCCGGACGGGCCGAGCGGCGTCACCATTTGCC‑CCCTGCGGGATGGGGAGGTTGATATTGTCGATTa                                           >  1:3064880/1‑93 (MQ=255)

                                                aGGCGCAAAATAGTGGTTTTTCCGCAGCCGGACGGGCCGAGCGGCGTCACCATTTG‑C‑CCCTGCGGGATGGTGAGGTTGATATTGTCGATTAcc                                         <  1:2865130/93‑1 (MQ=255)

                                                 ggCGCAAAATAGTGGTTTTGCCGCAGCCGGACGGGCCGAGCGGCGTCACCATTTGCC‑CCCTGCGGGATGGTGAGGTTGATATTGTCGATTAcc                                         >  1:201466/1‑93 (MQ=255)

                                                  gcgcAAAATAGTGGTTTTGCCGCAGCCGGACGCGCCGAGCGGCGTCACCATTTG‑C‑CCCTGCGGGATGGTGAGGTTGATATTGTCGATTACCGt                                       >  1:6894449/1‑93 (MQ=255)

                                                    gcAAAATAGTGGTTTTGCCGCAGCCGGACGGGCCGAGCGGCGTCACCATTTGCC‑CCCTGCGGGATGGTGAGGTTGATATTGTCGATTACCGTa                                      <  2:4833264/93‑1 (MQ=255)

                                                    gcAAAATAGTGGTTTTGCCGCAGCCGGACGGGCCGAGCGGCGTCACCATTTG‑C‑CCCTGCGGGATGGTGAGGTTGATATTGTCGATTACCGTAt                                     >  1:8760955/1‑93 (MQ=255)

                                                     cAAAATAGTGGTTTTGCCGCATCCGGACGGGCCGAGCGGCGTCACCATTTGCC‑CCCTGCGGGATGGTGAGGTTGATATTGTCGATTACCGTAt                                     <  2:3585191/93‑1 (MQ=255)

                                                     cAAAATAGTGGTTTTGCCGCAGCCGGACGGGCCGAGCGGCGTCACCATTTGCC‑CCCTGCGGGATGGTGAGGTTGATATTGTCGATTACCGTAt                                     <  2:253823/93‑1 (MQ=255)

                                                      aaaaTAGTGGTTTTGCCGCAGCCGGACGGGCCGAGCGGCGTCACCATTTG‑C‑CCCTGCGGGATGGTGAGGTTGATATTGTCGATTACCGTATTa                                   <  1:5440871/93‑1 (MQ=255)

                                                      aaaaTAGTGGTTTTGCCGCAGCCGGACGGGCCGAGCGGCGTCACCATTTG‑C‑CCCTGCGGGATGGTGAGGTTGATATTGTCGATTACCGTATTa                                   >  2:4974672/1‑93 (MQ=255)

                                                       aaaTAGTGGTTTTGCCGCAGCCGGACGGGCCGAGCGGCGTCACCATTTGCC‑CCCTGCGGGATGGTGAGGTTGATATTGTCGATTACCGTATTa                                   <  1:5050786/93‑1 (MQ=255)

                                                       aaaTAGTGGTTTTGCCGCAGCCGGACGGGCCGAGCGGCGTCACCATTTG‑C‑CCCTGCGGGATGGTGAGGTTGATATTGTCGATTACCGTATTAc                                  <  2:5134986/93‑1 (MQ=255)

                                                        aaTAGTGGTTTTGCCGCAGCCGGACGGGCCGAGCGGCGTCACCATTTGCC‑CCCTGCGGGATGGTGAGGTTGATATTGTCGATTACCGTATTAc                                  >  1:634994/1‑93 (MQ=255)

                                                        aaTAGTGGTTTTGCCGCAGCCGGACGGGCCGAGCGGCGTCACCATTTGCC‑CCCTGCGGGATGGTGAGGTTGATATTGTCGATTACCGTATTAc                                  <  2:8999459/93‑1 (MQ=255)

                                                        aaTAGTGGTTTTGCCGCAGCCGGACGGGCCGAGCGGCGTCACCATTTGCC‑CCCTGCGGGATGGTGAGGTTGATATTGTCGATTACCGTATTAc                                  <  1:7143094/93‑1 (MQ=255)

                                                        aaTAGTGGTTTTGCCGCAGCCGGACGGGCCGAGCGGCGTCACCATTTGCC‑CCCTGCGGGATGGTGAGGTTGATATTGTCGATTACCGTATTAc                                  >  1:1341978/1‑93 (MQ=255)

                                                         aTAGTGGTTTTGCCGCAGCCGGACGGGCCGAGCGGCGTCACCATTTGCC‑CCCTGCGGGATGGTGAGGTTGATATTGTCGATTACCGTATTACt                                 >  2:2737433/1‑93 (MQ=255)

                                                          tAGTGGTTTTGCCGCAGCCGGACGGGCCGAGCGGCGTCACCATTTG‑C‑CCCTGCGGGATGGTGAGGTTGATATTGTCGATTACCGTATTACTGc                               >  1:552561/1‑93 (MQ=255)

                                                           aGTGGTTTTGCCGCAGCCGGACGGGCCGAGCGGCGTCACCATTTGCC‑CCCTGCGGGATGGTGAGGTTGATATTGTCGATTACCGTATTACTGc                               <  2:9605053/93‑1 (MQ=255)

                                                           aGTGGTTTTGCCGCAGCCGGACGGGCCGAGCGGCGTCACCATTTGCC‑CCCTGCGGGATGGTGAGGTTGATATTGTCGATTACCGTATTACTGc                               <  2:9415211/93‑1 (MQ=255)

                                                           aGTGGTTTTGCCGCAGCCGGACGGGCCGAGCGGCGTCACCATTTG‑C‑CCCTGCGGGATGGTGAGGTTGATATTGTCGATTACCGTATTACTGcc                              <  2:750612/93‑1 (MQ=255)

                                                            gTGGTTTTGCCGCAGCCGGACGGGCCGAGCGGCGTCACCATTTGCC‑CCCTGCGGGATGGTGAGGTTGATATTGTCGATTACCGTATTACTGcc                              >  2:2130793/1‑93 (MQ=255)

                                                            gTGGTTTTGCCGCAGCCGGACGGGCCGAGCGGCGTCACCATTTGCC‑CCCTGCGGGATGGTGAGGTTGATATTGTCGATTACCGTATTACTGcc                              <  2:43925/93‑1 (MQ=255)

                                                             tGGTTTTGCCGCAGCCGGACGGGCCGAGCGGCGTCACCATTTG‑C‑CCCTGCGGGATGGTGAGGTTGATATTGTCGATTACCGTATTACTGCCaa                            >  1:4858128/1‑93 (MQ=255)

                                                              ggTTTTGCCGCAGCCGGACGGGCCGAGCGGCGTCACCATTTG‑C‑CCCTGCGGGATGGTGAGGTTGATATTGTCGATTACCGTATTACTGCCaaa                           >  1:2548235/1‑93 (MQ=255)

                                                               gTTTTGCCGCAGCCGGACGGGCCGAGCGGCGTCACCATTTGCC‑CCCTGCGGGATGGTGAGGTTGATATTGTCGATTACCGTATTACTGCCaaa                           <  2:3967164/93‑1 (MQ=255)

                                                                ttttGCCGCAGCCGGACGGGCCGAGCGGCGTCACCATTTGCC‑CCCTGCGGGATGGTGAGGTTGATATTGTCGATTACCGTATTACTGCCAAAt                          >  2:6044554/1‑93 (MQ=255)

                                                                   tGCCGCAGCCGGACGGGCCGAGCGGCGTCACCATTTG‑C‑CCCTGCGGGATGGTGAGGTTGATATTGTCGATTACCGTATTACTGCCAAATCGtt                      <  1:9834380/93‑1 (MQ=255)

                                                                   tGCCGCAGCCGGACGGGCCGAGCGGCGTCACCATTTG‑C‑CCCTGCGGGATGGTGAGGTTGATATTGTCGATTACCGTATTACTGCCAAATCGtt                      <  1:1942630/93‑1 (MQ=255)

                                                                   tGCCGCAGCCGGACGGGCCGAGCGGCGTCACCATTTG‑C‑CCCTGCGGGATGGTGAGGTTGATATTGTCGATTACCGTATTACTGCCAAATCGtt                      <  1:7630230/93‑1 (MQ=255)

                                                                    gCCGCAGCCGGACGGGCCGAGCGGCGTCACCATTTG‑C‑CCCTGCGGGATGGTGAGGTTGATATTGTCGATTACCGTATTACTGCCAAATCGttt                     <  2:8834225/93‑1 (MQ=255)

                                                                     ccGCAGCCGGACGGGCCGAGCGGCGTCACCATTTGCC‑CCCTGCGGGATGGTGAGGTTGATATTGTCGATTACCGTATTACTGCCAAATCGttt                     <  2:683648/93‑1 (MQ=255)

                                                                     ccGCAGCCGGACGGGCCGAGCGGCGTCACCATTTG‑C‑CCCTGCGGGATGGTGAGGTTGATATTGTCGATTACCGTATTACTGCCAAATCGTTTa                    >  1:8517091/1‑93 (MQ=255)

                                                                      cGCAGCCGGACGGGCCGAGCGGCGTCACCATTTGCC‑CCCTGCGGGATGGTGAGGTTGATATTGTCGATTACCGTATTACTGCCAAATCGTTTa                    <  1:6118706/93‑1 (MQ=255)

                                                                      cGCAGCCGGACGGGCCGAGCGGCGTCACCATTTGCC‑CCCTGCGGGATGGTGAGGTTGATATTGTCGATTACCGTATTACTGCCAAATCGTTTa                    <  2:3254536/93‑1 (MQ=255)

                                                                      cGCAGCCGGACGGGCCGAGCGGCGTCACCATTTGCC‑CCCTGCGGGATGGTGAGGTTGATATTGTCGATTACCGTATTACTGCCAAATCGTTTa                    >  2:8122503/1‑93 (MQ=255)

                                                                       gCAGCCGGACGGGCCGAGCGGCGTCACCATTTG‑C‑CCCTGCGGGATGGTGAGGTTGATATTGTCGATTACCGTATTACTGCCAAATCGTTTAGt                  <  1:2964168/93‑1 (MQ=255)

                                                                        cAGCCGGACGGGCCGAGCGGCGTCACCATTTGCC‑CCCTGCGGGATGGTGAGGTTGATATTGTCGATTACCGTATTACTGCCAAATCGTTTAGt                  <  2:6789856/93‑1 (MQ=255)

                                                                          gCCGGACGGGCCGAGCGGCGTCACCATTTGCC‑CCCTGCGGGATGGTGAGGTTGATATTGTCGATTACCGTATTACTGCCAAATCGTTTAGTGa                <  2:4565981/93‑1 (MQ=255)

                                                                            cGGACGGGCCGAGCGGCGTCACCATTTG‑C‑CCCTGCGGGATGGTGAGGTTGATATTGTCGATTACCGTATTACTGCCAAATCGTTTAGTGACGt             <  1:3715988/93‑1 (MQ=255)

                                                                             ggACGGGCCGAGCGGCGTCACCATTTG‑C‑CCCTGCGGGATGGTGAGGTTGATATTGTCGATTACCGTATTACTGCCAAATCGTTTAGTGACGtt            <  2:6980355/93‑1 (MQ=255)

                                                                              gACGGGCGGGGCGGCGTCACCATTGGCC‑CCCTGCGGGATGGTTAGGTTGATATTGTCGTTTACCGTATTACTGCCAAATCGTTTAGTGACGtt            <  2:3022586/93‑1 (MQ=255)

                                                                              gACGGGCCGAGCGGCGTCACCATTTGCC‑CCCTGCGGGATGGTGAGGTTGATATTGTCGATTACCGTATTACTGCCAAATCGTTTAGTGACGtt            >  1:6504039/1‑93 (MQ=255)

                                                                              gACGGGCCGAGCGGCGTCACCATTTG‑C‑CCCTGCGGGATGGTGAGGTTGATATTGTCGATTACCGTATTACTGCCAAATCGTTTAGTGACGTTg           <  1:9469859/93‑1 (MQ=255)

                                                                                  ggCCGAGCGGCGTCACCATTTG‑C‑CCCTGCGGGATGGTGAGGTTGATATTGTCGATTACCGTATTACTGCCAAATCGTTTAGTGACGTTGCGCa       >  2:6114818/1‑93 (MQ=255)

                                                                                  ggCCAAGCGGCGTCACCATTTG‑C‑CCCTGCGGGATGGTGAGGTTGATATTGTCGATTACCGTATTACTGCCAAATCGTTTAGTGACGTTgcgcg       >  2:3399892/1‑92 (MQ=255)

                                                                                   gCCGAGCGGCGTCACCATTTG‑C‑CCCTGCGGGATGGTGAGGTTGATATTGTCGATTACCGTATTACTGCCAAATCGTTTAGTGACGTTGCGCAg      >  1:7239143/1‑93 (MQ=255)

                                                                                     cGAGCGGCGTCACCATTTGCC‑CCCTGCGGGATGGTGAGGTTGATATTGTCGATTACCGTATTACTGCCAAATCGTTTAGTGACGTTGCGCAGt     <  2:7267690/93‑1 (MQ=255)

                                                                                     cGAGCGGCGTCACCATTTGCC‑CCCTGCGGGATGGTGAGGTTGATATTGTCGATTACCGTATTACTGCCAAATCGTTTAGTGACGTTGCGCAGt     >  2:1824304/1‑93 (MQ=255)

                                                                                     cGAGCGGCGTCACCATTTGCC‑CCCTGCGGGATGGTGAGGTTGATATTGTCGATTACCGTATTACTGCCAAATCGTTTAGTGACGTTGCGCAGt     >  2:1319815/1‑93 (MQ=255)

                                                                                     cGAGCGGCGTCACCATTTGCC‑CCCTGCGGGATGGTGAGGTTGATATTGTCGATTACCGTATTACTGCCAAATCGTTTAGTGACGTTGCGCAGt     >  2:9889200/1‑93 (MQ=255)

                                                                                      gAGCGGCGTCACCATTTGCC‑CCCTGCGGGATGGTGAGGTTGATATTGTCGATTACCGTATTACTGCCAAATCGTTTAGTGACGTTGCGCAGtt    >  2:3861896/1‑93 (MQ=255)

                                                                                      gAGCGGCGTCACCATTTGCC‑CCCTGCGGGATGGTGAGGTTGATATTGTCGATTACCGTAGTACTGCCAAATCGTTTAGTGACGTTGCGCAGtt    >  1:3406540/1‑93 (MQ=255)

                                                                                      gAGCGGCGTCACCATTTG‑C‑CCCTGCGGGATGGTGAGGTTGATATTGTCGATTACCGTATTACTGCCAAATCGTTTAGTGACGTTGCGCAGTTc   >  1:914634/1‑93 (MQ=255)

                                                                                       agcggcGTCACCATTTG‑C‑CCCTGCGGGATGGTGAGGTTGATATTGTCGATTACCGTATTACTGCCAAATCGTTTAGTGACGTTGCGCAGTTCa  <  1:6658309/93‑1 (MQ=255)

CCATCAATGAAAATTTGCCCTTCGCTCGGTTTTTCCAGCCCGGCAACCAGGCGCAAAATAGTGGTTTTGCCGCAGCCGGACGGGCCGAGCAGCGTCACCATTTG‑C‑CCCTGCGGGATGGTGAGGTTGATATTGTCGATTACCGTATTACTGCCAAATCGTTTAGTGACGTTGCGCAGTTCA  >  NC_000913/277827‑278006

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`