Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,393,734 A→G G61G (GGT→GGC nuoJ ← NADH dehydrogenase I chain J

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,393,7340AG99.6% 773.1 / ‑4.9 243G61G (GGT→GGCnuoJNADH dehydrogenase I chain J
Reads supporting (aligned to +/- strand):  ref base A (0/1);  new base G (126/116);  total (126/117)
Fisher's exact test for biased strand distribution p-value = 4.81e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.49e-01

Only 100 of 253 total aligned reads displayed.

CTGCGGTTTCAGCCACTGGCGTTCCTGTTCGATTTCTGAACCGCCCAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCACCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTAAGCGCCCAGTGAGAAGAACACCCCGGAAATCGCCAGCAGCGAAATAATCAGGTA  >  NC_000913/2393644‑2393826
                                                                                          |                                                                                            
cTGCGGTTTCAGCCACTGGCGTTCCTGTTCGATTTCTGAACCGCCCAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGcc                                                                                            >  1:939434/1‑93 (MQ=255)
    ggTTTCAGCCACTGGCGTTCCTGTTCGATTTCTGAACCGCCCAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCcgcg                                                                                        >  1:7306817/1‑93 (MQ=255)
     gTTTCAGCCACTGGCGTTCCTGTTCGATTTCTGAACCGCCCAGGCTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGt                                                                                       >  1:1566280/1‑93 (MQ=255)
      tttCAGCCACTGGCGTTCCTGTTCGATTTCTGAACCGCCCAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTa                                                                                      <  2:1762970/93‑1 (MQ=255)
      tttCAGCCACTGGCGTTCCTGTTCGATTTCTGAACCGCCCAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTa                                                                                      <  2:9221454/93‑1 (MQ=255)
      tttCAGCCACTGGCGTTCCTGTTCGATTTCTGAACCGCCCAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTa                                                                                      >  1:4793897/1‑93 (MQ=255)
       ttCAGCCACTGGCGTTCCTGTTCGATTTCTGAACCGCCCAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAg                                                                                     <  1:5620871/93‑1 (MQ=255)
       ttCAGCCACTGGCGTTCCTGTTCGATTTCTGAACCGCCCAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAg                                                                                     <  1:5277218/93‑1 (MQ=255)
        tCAGCCACTGGCGTTCCTGTTCGATTTCTGAACCGCCCAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGa                                                                                    <  1:1004542/93‑1 (MQ=255)
        tCAGCCACTGGCGTTCCTGTTCGATTTCTGAACCGCCCAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGa                                                                                    <  1:4119666/93‑1 (MQ=255)
          aGCCACTGGCGTTCCTGTTCGATTTCTGAACCGCCCAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACg                                                                                  <  2:7165731/93‑1 (MQ=255)
           gCCACTGGCGTTCCTGTTCGATTTCTGAACCGCCCAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGa                                                                                 >  1:9295375/1‑93 (MQ=255)
           gCCACTGGCGTTCCTGTTCGATTTCTGAACCGCCCAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGa                                                                                 <  2:8252944/93‑1 (MQ=255)
            ccACTGGCGTTCCTGTTCGATTTCTGAACCGCCCAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGAt                                                                                <  1:8513391/93‑1 (MQ=255)
             cACTGGCGTTCCTGTTCGATTTCTGAACCGCCCAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATa                                                                               <  2:2663305/93‑1 (MQ=255)
              aCTGGCGTTCCTGTTCGATTTCTGAACCGCCCAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATaa                                                                              >  1:140821/1‑93 (MQ=255)
               cTGGCGTTCCTGTTCGATTTCTGAACCGCCCAGGTTGAGCATCATCACCACGAACACGACCAGCACCATAATGGCGCCCGCGTAGACGATAAt                                                                             >  1:9720384/1‑93 (MQ=255)
               cTGGCGTTCCTGTTCGATTTCTGAACCGCCCAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATAAt                                                                             <  2:6271595/93‑1 (MQ=255)
               cTGGCGTTCCTGTTCGATTTCTGAACCGCCCAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATAAt                                                                             <  2:9538124/93‑1 (MQ=255)
                tGGCGTTCCTGTTCGATTTCTGAACCGCCCAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATAAtt                                                                            <  1:974223/93‑1 (MQ=255)
                tGGCGTTCCTGTTCGATTTCTGAACCGCCCAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATAAtt                                                                            >  2:5791874/1‑93 (MQ=255)
                 ggCGTTCCTGTTCGATTTCTGAACCGCCCAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATAAttt                                                                           <  2:4839575/93‑1 (MQ=255)
                  gCGTTCCTGTTCGATTTCTGAACCGCCCAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATAATTTc                                                                          >  1:2015095/1‑93 (MQ=255)
                  gCGTTCCTGTTCGATTTCTGAACCGCCCAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATAATTTc                                                                          >  1:6105637/1‑93 (MQ=255)
                  gCGTTCCTGTTCGATTTCTGAACCGCCCAGGCTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGAAGACGATAATTTc                                                                          >  1:9407500/1‑93 (MQ=255)
                   cGTTCCTGTTCGATTTCTGAACCGCCCAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATAATTTcc                                                                         <  1:8468612/93‑1 (MQ=255)
                     ttCCTGTTCGATTTCTGAACCGCCCAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAg                                                                       >  2:6855183/1‑93 (MQ=255)
                     ttCCTGTTCGATTTCTGAACCGCCCAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAg                                                                       >  2:4073210/1‑93 (MQ=255)
                     ttCCTGTTCGATTTCTGAACCGCCCAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAg                                                                       <  1:6228865/93‑1 (MQ=255)
                     ttCCTGTTCGATTTCTGAACCGCCCAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAg                                                                       >  1:6012014/1‑93 (MQ=255)
                     ttCCTGTTCGATTTCTGAACCGCCCAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGCAGACGATAATTTCCAg                                                                       >  2:1059589/1‑93 (MQ=255)
                      tCCTGTTCGATTTCTGAACCGCCCAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAgc                                                                      >  1:801274/1‑93 (MQ=255)
                        cTGTTCGATTTCTGAACCGCCCAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAgcgc                                                                    >  2:7481536/1‑93 (MQ=255)
                         tGTTCGATTTCTGAACCGCCCAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCa                                                                   >  2:8052582/1‑93 (MQ=255)
                          gTTCGATTTCTGAACCGCCCAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCAc                                                                  >  1:8095739/1‑93 (MQ=255)
                          gTTCGATTTCTGAACCGCCCAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCAc                                                                  >  2:8072948/1‑93 (MQ=255)
                          gTTCGATTTCTGAACCGCCCAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCAc                                                                  <  2:7754765/93‑1 (MQ=255)
                           ttCGATTTCTGAACCGCCCAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCAcg                                                                 >  1:4560351/1‑92 (MQ=255)
                           ttCGATTTCTGAACCGCCCAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCAcc                                                                 <  1:3318284/93‑1 (MQ=255)
                             cGATTTCTGAACCGCCCAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCgg                                                               <  2:4218906/93‑1 (MQ=255)
                              gATTTCTGAACCGCCCAGGTTGAGCGTCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGc                                                              >  1:2735698/1‑93 (MQ=255)
                              gATTTCTGAACCGCCCAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGc                                                              >  2:2156605/1‑93 (MQ=255)
                              gATTTCTGAACCGCCCAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGc                                                              >  2:3033700/1‑93 (MQ=255)
                                tttCTGAACCGCCCAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGa                                                            <  1:7067158/93‑1 (MQ=255)
                                   cTGAACCGCCCAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGt                                                         >  1:9568256/1‑93 (MQ=255)
                                    tGAACCGCCCAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTa                                                        <  2:3553493/93‑1 (MQ=255)
                                    tGAACCGCCCAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTa                                                        <  2:4168171/93‑1 (MQ=255)
                                     gAACCGCCCAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTaa                                                       >  2:210282/1‑93 (MQ=255)
                                     gAACCGCCCAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTaa                                                       >  1:2279138/1‑93 (MQ=255)
                                     gAACCGCCCAGGTTGAGCATCATCACCACGAACACGAACAGAACCATAATGGCGCCCGCGTAACCGATAATTTCCAGCCCCCGGGCGGAGTaa                                                       >  1:5761572/1‑93 (MQ=255)
                                      aaCCGCCCAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTacg                                                      <  2:7026882/93‑3 (MQ=255)
                                      aaCCGCCCAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTAAg                                                      <  2:1404666/93‑1 (MQ=255)
                                      aaCCGCCCAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTAAg                                                      <  1:9202079/93‑1 (MQ=255)
                                          gCCCAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTAAGCGcc                                                  >  2:3342894/1‑93 (MQ=255)
                                           cccAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTAAGCGccc                                                 <  2:930552/93‑1 (MQ=255)
                                           cccAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTAAGCGccc                                                 <  1:1683880/93‑1 (MQ=255)
                                            ccAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTAAGCGCCCa                                                >  2:4480316/1‑93 (MQ=255)
                                            ccAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTAAGCGCCCa                                                <  2:2396315/93‑1 (MQ=255)
                                             cAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTAAGCGCCCAg                                               <  1:9596322/93‑1 (MQ=255)
                                              aGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTAAGCGCCCAgg                                              >  2:1871160/1‑92 (MQ=255)
                                              aGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTAAGCGCCCAGt                                              <  2:5988864/93‑1 (MQ=255)
                                               ggTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTAAGCGCCCAGTg                                             >  2:2910555/1‑93 (MQ=255)
                                                gTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTAAGCGCCCAGTga                                            <  2:7445120/93‑1 (MQ=255)
                                                  tGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTAAGCGCCCAGTgaga                                          <  2:2554142/93‑1 (MQ=255)
                                                    aGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTAAGCGCCCAGTGagaag                                        <  2:1551276/93‑1 (MQ=255)
                                                     gCATCATCACCACGAACTCGAACAGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTAAGCGCCCAGTGagaaga                                       >  2:8960077/1‑93 (MQ=255)
                                                     gCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCAACGGCGAACAAAACGCCCAGTCagaaga                                       >  1:4818719/1‑93 (MQ=255)
                                                      catcatCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTAAGCGCCCAGTGAgaagaa                                      <  2:5432288/93‑1 (MQ=255)
                                                       atcatcACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTAAGCGCCCAGTGAGAAGAac                                     <  2:6544151/93‑1 (MQ=255)
                                                       atcatcACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTAAGCGCCCAGTGAGAAGAac                                     >  2:5030664/1‑93 (MQ=255)
                                                        tcatcaCCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTAAGCGCCCAGTGAgaagaaac                                    >  1:4415058/1‑91 (MQ=255)
                                                        tcatcaCCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTAAGCGCCCAGTGAGAAGAaca                                    <  2:7412036/93‑1 (MQ=255)
                                                        tcatcaCCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTAAGCGCCCAGTGAGAAGAaca                                    >  2:6803629/1‑93 (MQ=255)
                                                        tcatcaCCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTAAGCGCCCAGTGAGAAGAaca                                    >  2:1642427/1‑93 (MQ=255)
                                                        tcatcaCCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTAAGCGCCCAGTGAGAAGAaca                                    >  1:2989205/1‑93 (MQ=255)
                                                         catcaCCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTAAGCGCCCAGTGAGAAGAacac                                   <  1:7621216/93‑1 (MQ=255)
                                                         catcaCCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGAAAGCGCCCAGTGAGAAGAacac                                   >  1:6274705/1‑93 (MQ=255)
                                                           tcaCCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTAAGCGCCCAGTGAGAAGAACAccc                                 >  1:7716913/1‑93 (MQ=255)
                                                            caccacGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTAAGCGCCCAGTGAGAAGAACAcccc                                <  2:643725/93‑1 (MQ=255)
                                                             accacGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTAAGCGCCCAGTGAGAAGAACACCCCg                               >  2:7046435/1‑93 (MQ=255)
                                                                acgaacacgaacAGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAACGAAGCGCCCAGTGAGAAGAACACCCCGCaa                            >  1:2469939/1‑93 (MQ=255)
                                                                 cgaacacgaacaGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTAAGCGCCCAGTGAGAAGAACACCCCGGaaa                           <  1:4318423/93‑1 (MQ=255)
                                                                  gaacacgaacaGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTAAGCGCCCAGTGAGAAGAACACCCCGGAAAt                          >  1:9843982/1‑93 (MQ=255)
                                                                  gaacacgaacaGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTAAGCGCCCAGTGAGAAGAACACCCCGGAAAt                          >  1:5805441/1‑93 (MQ=255)
                                                                   aacacgaacaGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTAAGCGCCCAGTGAGAAGAACACCCCGGAAATc                         >  2:891365/1‑93 (MQ=255)
                                                                    acacgaacaGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTAAGCGCCCAGTGAGAAGAACACCCCGGAAAtag                        >  2:3651178/1‑91 (MQ=255)
                                                                    acacgaacaGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTAAGCGCCCAGTGAGAAGAACACCCCGGAAATCg                        >  1:8245769/1‑93 (MQ=255)
                                                                    acacgaacaGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTAAGCGCCCAGTGAGAAGAACACCCCGGAAATCg                        >  2:5553584/1‑93 (MQ=255)
                                                                    acacgaacaGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTAAGCGCCCAGTGAGAAGAACACCCCGGAAATCg                        >  2:3922539/1‑93 (MQ=255)
                                                                      acgaacaGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTAAGCGCCCAGTGAGAAGAACACCCCGGAAATCGcc                      <  1:5325718/93‑1 (MQ=255)
                                                                       cgaacaGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTAAGCGCCCAGTGAGAAGAACACCCCGGAAATCGCca                     >  1:8714717/1‑93 (MQ=255)
                                                                       cgaacaGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTAAGCGCCCAGTGAGAAGAACACCCCGGAAATCGCca                     >  2:1985748/1‑93 (MQ=255)
                                                                       cgaacaGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTAAGCGCCCAGTGAGAAGAACACCCCGGAAATCGCca                     <  2:9717150/93‑1 (MQ=255)
                                                                           caGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTAAGCGCCCAGTGAGAAGAACACCCCGGAAATCGCcagcag                 <  1:5574930/93‑1 (MQ=255)
                                                                            aGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACTGGCGAAGTAAGCGACCAGTGAGAAGAACACCCCGGAAATCGCCagcagc                >  1:7920882/1‑93 (MQ=255)
                                                                               aCCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTAAGCGCCCAGTGAGAAGAACACCCCGGAAATCGCCAGCAGCGaa             >  2:6618124/1‑93 (MQ=255)
                                                                               aCCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTAAGCGCCCAGTGAGAAGAACACCCCGGAAATCGCCAGCAGCGaa             >  2:1195829/1‑93 (MQ=255)
                                                                                 cATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTAAGCGCCCAGTGAGAAGAACACCCCGGAAATCGCCAGCAGCGAaat           <  1:1908399/93‑1 (MQ=255)
                                                                                   tAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTAAGCGCCCAGTGAGAAGAACACCCCGGAAATCGCCAGCAGCGAaataa         >  2:9841533/1‑93 (MQ=255)
                                                                                    aaTGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTAAGCGCCCAGTGAGAAGAACACCCCGGAAATCGCCAGCAGCGAaataat        <  2:7550461/93‑1 (MQ=255)
                                                                                          |                                                                                            
CTGCGGTTTCAGCCACTGGCGTTCCTGTTCGATTTCTGAACCGCCCAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCACCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTAAGCGCCCAGTGAGAAGAACACCCCGGAAATCGCCAGCAGCGAAATAATCAGGTA  >  NC_000913/2393644‑2393826

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: