Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,406,831 A→G intergenic (+33/‑51) b2290 → / → b2291 putative aminotransferase/putative alpha helix protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,406,8310AG99.7% 906.9 / NA 286intergenic (+33/‑51)b2290/b2291putative aminotransferase/putative alpha helix protein
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base G (191/94);  minor base C (1/0);  total (192/94)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 353 total aligned reads displayed.

TATCGAGCTGTCTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCAGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCCATCTCTCCCGCCT  >  NC_000913/2406741‑2406919
                                                                                          |                                                                                        
tatCGAGCTGTCTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCggcggc                                                                                        >  2:4046802/1‑93 (MQ=255)
 atCGAGCTGTCTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGgcggcg                                                                                       >  2:2533071/1‑93 (MQ=255)
 atCGAGCTGTCTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGgcggcg                                                                                       <  1:7699459/93‑1 (MQ=255)
  tCGAGCTGTCTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGt                                                                                      <  2:508227/93‑1 (MQ=255)
    gAGCTGTCTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTa                                                                                    <  2:9818315/93‑1 (MQ=255)
    gAGCTGTCTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTa                                                                                    >  2:809430/1‑93 (MQ=255)
    gAGCTGTCTCTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTa                                                                                    <  2:8650148/93‑1 (MQ=255)
     aGCTGTCTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGAAGATTGCATCCGGCGGCGTTAt                                                                                   >  1:5503745/1‑93 (MQ=255)
      gCTGTCTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATc                                                                                  >  1:2522234/1‑93 (MQ=255)
       cTGTCTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATcc                                                                                 <  2:3872824/93‑1 (MQ=255)
       cTGTCTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATcc                                                                                 <  2:5882356/93‑1 (MQ=255)
        tGTCTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATccc                                                                                >  2:6991720/1‑93 (MQ=255)
        tGTCTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATccc                                                                                >  2:5460184/1‑93 (MQ=255)
         gTCTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCg                                                                               >  2:4600999/1‑93 (MQ=255)
          tCTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGc                                                                              >  1:1715448/1‑93 (MQ=255)
           cTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTCATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGcc                                                                             >  1:5916116/1‑93 (MQ=255)
           cTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGcc                                                                             <  2:1857933/93‑1 (MQ=255)
              tGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCcaca                                                                          >  1:2342013/1‑93 (MQ=255)
               gAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACaa                                                                         >  2:7165825/1‑93 (MQ=255)
               gAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCACCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACaa                                                                         <  2:7956828/93‑1 (MQ=255)
                aGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAAt                                                                        >  1:5890884/1‑93 (MQ=255)
                  cAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGa                                                                      <  1:8402745/93‑1 (MQ=255)
                  cAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGa                                                                      <  1:925856/93‑1 (MQ=255)
                  cAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGa                                                                      <  1:7006713/93‑1 (MQ=255)
                   aaGTCCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGAc                                                                     <  2:5187518/93‑1 (MQ=255)
                    aGTTCGCCCTTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTCCACTCCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGAcc                                                                    <  2:3417682/93‑1 (MQ=255)
                     gTTCGGGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCt                                                                   <  1:519849/93‑1 (MQ=255)
                     gTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCt                                                                   >  2:260133/1‑93 (MQ=255)
                       tCGCGCTTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCtga                                                                 <  1:1959240/93‑1 (MQ=255)
                         gcgcgTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCtgatg                                                               <  2:5774918/93‑1 (MQ=255)
                           gcgTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTgatgat                                                             >  2:7485619/1‑93 (MQ=255)
                            cgTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGatgatg                                                            >  2:328430/1‑93 (MQ=255)
                             gtgtCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGt                                                           >  2:8956769/4‑93 (MQ=255)
                             gTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGatgatgc                                                           >  1:2247082/1‑92 (MQ=255)
                             gTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGt                                                           >  2:6446508/1‑93 (MQ=255)
                              tttCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGtc                                                          >  2:565011/1‑93 (MQ=255)
                               ttCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGtca                                                         >  2:9334006/1‑93 (MQ=255)
                                tCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGtcat                                                        >  2:3196602/1‑93 (MQ=255)
                                  cTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGtcatca                                                      <  1:5789365/93‑1 (MQ=255)
                                  cTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCAGCGGCGTTATCCCGCCACAATGACCTGATGATGtcatca                                                      >  1:8333704/1‑93 (MQ=255)
                                    ttCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATa                                                    >  2:1497523/1‑93 (MQ=255)
                                     tCTGGTTATCATCAGCTGTAATCTTCATTTCACTGCCGGAGATTGCATCCTGCGGGGTTACCCCGCGGCAATAGCCTGATGGTGCcatcatcc                                                   >  1:8830494/1‑91 (MQ=255)
                                        ggTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTa                                                >  1:9954369/1‑93 (MQ=255)
                                         gTTATCATCAGCTTTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTaa                                               <  1:279781/93‑1 (MQ=255)
                                         gTTATCATCAGCTGTATTCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTaa                                               <  2:6573197/93‑1 (MQ=255)
                                         gTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTaa                                               >  1:508709/1‑93 (MQ=255)
                                           tATCATCAGCTTTAATTTTAATTTCACTGCCGGAGATTCCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAgg                                             <  1:3564079/93‑1 (MQ=255)
                                           tATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCTTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAgg                                             <  1:273829/93‑1 (MQ=255)
                                                tcaGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACt                                        >  1:7224342/1‑93 (MQ=255)
                                                 caGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTa                                       <  2:210937/93‑1 (MQ=255)
                                                 caGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTa                                       <  1:4185736/93‑1 (MQ=255)
                                                 caGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTa                                       <  1:1542856/93‑1 (MQ=255)
                                                    cggTATTCTTATTTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGa                                    <  2:143694/91‑1 (MQ=255)
                                                    cTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCTTTACCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGa                                    <  2:6699986/93‑1 (MQ=255)
                                                     tGTAATTTTAATTTCCCTGCCGGATATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGaa                                   <  2:2318435/93‑1 (MQ=255)
                                                     tGTAATCTTAATTTCACTGCCTGTGATTGTATCCTTCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGaa                                   >  2:9269433/1‑93 (MQ=255)
                                                     tGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGaa                                   >  2:3056293/1‑93 (MQ=255)
                                                     tGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGaa                                   >  2:7385954/1‑93 (MQ=255)
                                                      gTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGaaa                                  <  1:1828910/93‑1 (MQ=255)
                                                         aTCTTAATTTCACTGCCGGAGATTGCATCGGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACag                               <  1:6613086/93‑1 (MQ=255)
                                                          tCTTAATTTCGCTGCCGGAGATTCCACCCGGCGGCGTCCCCCCGCCACAATGAACTGATGATGTCATCATACGTAAGGTCACTATGAAACaga                              <  1:9483278/93‑1 (MQ=255)
                                                          tCTTAATTTCACTGCGGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACaga                              <  2:6085744/93‑1 (MQ=255)
                                                           cTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACagag                             >  1:3983702/1‑93 (MQ=255)
                                                           cTTAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACagag                             >  2:3687138/1‑93 (MQ=255)
                                                             tAATTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGcc                           <  1:8081541/93‑1 (MQ=255)
                                                             tAATTTCACGCCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGcc                           <  2:1230458/93‑1 (MQ=255)
                                                              aaTTTCTCGGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCa                          <  2:875470/93‑1 (MQ=255)
                                                              aaTTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCa                          >  1:7518996/1‑93 (MQ=255)
                                                              aaTTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCa                          >  2:962225/1‑93 (MQ=255)
                                                               aTTTCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCAt                         <  1:7288301/93‑1 (MQ=255)
                                                               aTTTCACGCCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCAt                         <  1:2533248/93‑1 (MQ=255)
                                                                tttCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCAtt                        <  1:4637485/93‑1 (MQ=255)
                                                                 tccccTGCCGGAGATTCCATCGGGAGACGTTACCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCAttt                       <  1:1258837/89‑1 (MQ=255)
                                                                  tCACTGCGGGAGTTTGCACCCGGCGGCGTTACCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCAtttt                      <  2:9444649/93‑1 (MQ=255)
                                                                  tCACTGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCAtttt                      >  1:8578119/1‑93 (MQ=255)
                                                                    gcTGGCGGAGATTGCACCCGCGGGCGTTATCCCGCCACAATGACTTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCAtttttt                    <  2:9745185/92‑1 (MQ=255)
                                                                    ccTGCCGGAGATTGCATCCGGCGGCTTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCAtttttt                    <  1:3195935/92‑1 (MQ=255)
                                                                    aCTGCCGGAGGTTGCATCTCGCGGCGTTATCCCGCCACAATTACCTGATGTTGTCATCATACGTAAGGACACTATGAAACAGAGCCAttttgt                    >  2:1806632/1‑91 (MQ=255)
                                                                     cTGCCGGAGATTGCATCCGGCGGCTTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCAttttttt                   <  1:8763422/93‑1 (MQ=255)
                                                                      tGCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTg                  >  2:911854/1‑93 (MQ=255)
                                                                       gCCGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGc                 >  1:6099493/1‑93 (MQ=255)
                                                                        ccGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGcc                >  2:6916814/1‑93 (MQ=255)
                                                                        ccGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGcc                >  1:9331073/1‑93 (MQ=255)
                                                                         cGGAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGccc               >  2:7645278/1‑93 (MQ=255)
                                                                          ggAGTTTGACTCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCCa              <  1:5288707/93‑1 (MQ=255)
                                                                          ggAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCCa              >  1:4061229/1‑93 (MQ=255)
                                                                          ggAGATTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCCa              <  1:9891824/93‑1 (MQ=255)
                                                                           gagaTTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATTCGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCCAt             >  2:2031585/1‑93 (MQ=255)
                                                                           gagaTTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAATGTCACTATGAAACAGAGCCATTTTTTTGCCCAt             >  1:9678643/1‑93 (MQ=255)
                                                                           gagaTTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCCTTTTTTTGCCCAt             >  1:6549948/1‑93 (MQ=255)
                                                                           gagaTTGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCCAt             >  1:5009978/1‑93 (MQ=255)
                                                                              aTTGCATCCGGCGTTTTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCCAtctc          <  1:1088851/93‑1 (MQ=255)
                                                                               ttGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCCAtctct         >  2:4912847/1‑93 (MQ=255)
                                                                               tcccATCCGGCGGCGTTACCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCCAtctct         <  2:2761197/90‑1 (MQ=255)
                                                                                tGCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCCAtctctc        <  2:9765045/93‑1 (MQ=255)
                                                                                 gCATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCCATCTCTcc       >  1:6310876/1‑93 (MQ=255)
                                                                                  cATCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCCATCTCTccc      <  1:10015476/93‑1 (MQ=255)
                                                                                    tCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCCATCTCTCCCGc    >  2:8393789/1‑93 (MQ=255)
                                                                                    tCCGGCGGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTCCCCATCTCTCCCGc    >  1:3394404/1‑93 (MQ=255)
                                                                                      cggcggCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCCATCTCTCCCGCCt  >  1:2031338/1‑93 (MQ=255)
                                                                                          |                                                                                        
TATCGAGCTGTCTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAATCTTAATTTCACTGCCGGAGATTGCATCCGGCAGCGTTATCCCGCCACAATGACCTGATGATGTCATCATACGTAAGGTCACTATGAAACAGAGCCATTTTTTTGCCCATCTCTCCCGCCT  >  NC_000913/2406741‑2406919

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: