BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,465,657	T→C	Y365H (TAT→CAT)	intC →	putative prophage Sf6‑like integrase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,465,657	0	T	C	100.0%	1205.0 / NA	366	Y365H (TAT→CAT)	intC	putative prophage Sf6‑like integrase
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (185/181); total (185/181)

Only 100 of 374 total aligned reads displayed.

AACGAGCACGAATGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGTATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTGAGCGACCTTAACAACTATCGAATAG  >  NC_000913/2465567‑2465746

  cGAGCACGAATGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCAtct                                                                                       <  2:7075121/93‑1 (MQ=255)

   gAGCACGAATGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCAtctc                                                                                      <  2:1695945/93‑1 (MQ=255)

   gAGCACGAATGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCAtctc                                                                                      >  1:5466362/1‑93 (MQ=255)

    aGCACGAATGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCg                                                                                     >  1:8967905/1‑93 (MQ=255)

      cACGAATGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGAt                                                                                   >  1:4091766/1‑93 (MQ=255)

        cGAATGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATaa                                                                                 <  2:10013378/93‑1 (MQ=255)

        cGAATGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATaa                                                                                 >  1:2164600/1‑93 (MQ=255)

        cGAATGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATaa                                                                                 <  1:8795707/93‑1 (MQ=255)

         gAATGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATaaa                                                                                <  2:9847952/93‑1 (MQ=255)

         gAATGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATaaa                                                                                >  2:6836805/1‑93 (MQ=255)

         gAATGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATaaa                                                                                <  1:6791196/93‑1 (MQ=255)

         gAATGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATaaa                                                                                >  1:5667720/1‑93 (MQ=255)

         gAATGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATaaa                                                                                >  1:5579015/1‑93 (MQ=255)

          aaTGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGCGGGATTTACAACCATGCTCAGCATCTCGATAAAc                                                                               >  1:2498617/1‑93 (MQ=255)

             ggCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCa                                                                            <  2:3554713/93‑1 (MQ=255)

             ggCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCa                                                                            <  2:8406479/93‑1 (MQ=255)

             ggCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCa                                                                            >  1:7213950/1‑93 (MQ=255)

             ggCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCa                                                                            <  2:2485881/93‑1 (MQ=255)

               ccTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCaga                                                                          <  1:9190156/93‑1 (MQ=255)

                ctgctgACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCagag                                                                         <  2:3314778/93‑1 (MQ=255)

                 tgctgACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAgaga                                                                        >  1:1280925/1‑93 (MQ=255)

                  gctgACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGaa                                                                       <  2:4726289/93‑1 (MQ=255)

                   ctgACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGaaa                                                                      <  1:1683823/93‑1 (MQ=255)

                    tgACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAat                                                                     <  1:8166096/93‑1 (MQ=255)

                     gACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAatg                                                                    >  2:2307821/1‑93 (MQ=255)

                      aCGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATACACGCAGAGAAatga                                                                   >  2:3057504/1‑93 (MQ=255)

                      aCGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAatga                                                                   <  2:2736547/93‑1 (MQ=255)

                      aCGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAatga                                                                   >  2:481057/1‑93 (MQ=255)

                       cGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAatgat                                                                  <  1:4587062/93‑1 (MQ=255)

                        gCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAatgatg                                                                 >  2:5342763/1‑93 (MQ=255)

                        gCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAatgatg                                                                 <  1:6976589/93‑1 (MQ=255)

                          tATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCa                                                               <  2:5927256/93‑1 (MQ=255)

                           aTTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCaa                                                              >  2:9076792/1‑93 (MQ=255)

                           aTTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCaa                                                              <  1:307436/93‑1 (MQ=255)

                            ttGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAAt                                                             >  2:3729711/1‑93 (MQ=255)

                             tGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAAtg                                                            <  2:3865075/93‑1 (MQ=255)

                             tGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAAtg                                                            <  2:1524635/93‑1 (MQ=255)

                                  tGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTggg                                                       >  1:5801827/1‑93 (MQ=255)

                                  tGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTggg                                                       >  1:4023404/1‑93 (MQ=255)

                                   gCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGc                                                      <  2:5431842/93‑1 (MQ=255)

                                   gCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGc                                                      <  1:1460677/93‑1 (MQ=255)

                                     aaCTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGGGGGAgg                                                    >  2:6888083/1‑93 (MQ=255)

                                      aCTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGa                                                   <  2:96246/93‑1 (MQ=255)

                                       cTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGAc                                                  <  2:578987/93‑1 (MQ=255)

                                         ggCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTg                                                <  2:6093998/93‑1 (MQ=255)

                                         ggCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGGGGGGCGACTg                                                >  1:6278490/1‑93 (MQ=255)

                                            acaTGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCt                                             >  2:6201372/1‑93 (MQ=255)

                                              aTGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTtg                                           >  1:3459938/1‑93 (MQ=255)

                                               tGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGGCTGGCTtga                                          >  1:17629/1‑93 (MQ=255)

                                               tGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCtttg                                          >  2:7520329/1‑91 (MQ=255)

                                               tGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCttta                                          >  1:3886515/1‑91 (MQ=255)

                                               tGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTtga                                          >  1:6372538/1‑93 (MQ=255)

                                                gCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTtgat                                         <  1:18869/93‑1 (MQ=255)

                                                  aaaCGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTttatta                                       >  2:1124470/1‑91 (MQ=255)

                                                      ggcggATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCACTGGTGGGCGGCCTGGCTTGATGACAAg                                   >  2:4305418/1‑93 (MQ=255)

                                                       gcggATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAgg                                  >  2:9496694/1‑93 (MQ=255)

                                                       gcggATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAgg                                  <  2:45631/93‑1 (MQ=255)

                                                       gcggATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAgg                                  >  1:6064497/1‑93 (MQ=255)

                                                        cgtaTCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGt                                 <  1:3961316/90‑1 (MQ=255)

                                                        cggATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGt                                 <  1:3239337/93‑1 (MQ=255)

                                                        cggATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGt                                 <  2:417922/93‑1 (MQ=255)

                                                         ggATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAgggg                                >  1:3612322/1‑91 (MQ=255)

                                                          gATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTgg                               <  2:1316512/93‑1 (MQ=255)

                                                          gATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTgg                               <  1:5131413/93‑1 (MQ=255)

                                                          gATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTgg                               <  1:2901586/93‑1 (MQ=255)

                                                           aTCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGGTGAGAAGggggg                              >  1:3742025/1‑92 (MQ=255)

                                                           aTCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGGGGAGggggg                              >  2:6946759/1‑92 (MQ=255)

                                                           aTCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGggggg                              >  1:7999013/1‑92 (MQ=255)

                                                            tCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGgggggg                             >  2:3498838/1‑91 (MQ=255)

                                                            tCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAg                             <  2:1496756/93‑1 (MQ=255)

                                                            tCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAg                             <  1:2286716/93‑1 (MQ=255)

                                                            tCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAg                             <  1:7538501/93‑1 (MQ=255)

                                                             cTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGt                            <  1:5295606/93‑1 (MQ=255)

                                                             cTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTCGAGt                            <  2:6488246/93‑1 (MQ=255)

                                                              tgtgCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTg                           <  1:2811905/93‑1 (MQ=255)

                                                               gtgCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTGa                          <  1:8379548/93‑1 (MQ=255)

                                                               gtgCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTGa                          <  2:934932/93‑1 (MQ=255)

                                                                tgCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTGAg                         <  2:776603/93‑1 (MQ=255)

                                                                  cGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTGAGCg                       <  2:2874915/93‑1 (MQ=255)

                                                                    tGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGGTGAGAAGGGGGAGTGAGCGAc                     >  2:8130350/1‑93 (MQ=255)

                                                                    tGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTGAGCGAc                     <  1:8419314/93‑1 (MQ=255)

                                                                      ggATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTGAGCGACCt                   <  2:9168651/93‑1 (MQ=255)

                                                                      ggATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTGAGCGACCt                   <  2:5060578/93‑1 (MQ=255)

                                                                      ggATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTGAGCGACCt                   <  2:5833910/93‑1 (MQ=255)

                                                                       gATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGGGGAGTGAGCGACCtt                  >  1:7434005/1‑93 (MQ=255)

                                                                         tttACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTGAGCGACCttta                >  2:6710797/1‑91 (MQ=255)

                                                                         tttACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTGAGCGACCTTaa                <  1:4746627/93‑1 (MQ=255)

                                                                          ttACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTGAGCGACCTTaac               <  1:4665040/93‑1 (MQ=255)

                                                                            aCAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTGAGCGACCTTaacaa             >  2:3987646/1‑93 (MQ=255)

                                                                            aCAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTGAGCGACCTTaacaa             <  1:6708158/93‑1 (MQ=255)

                                                                            aCAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGGGGGGTGGGCGACCTTaacaa             >  1:7736449/1‑93 (MQ=255)

                                                                               aCCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGGGGAGTGAGGGACCTTAAAAACtt          >  2:8646016/1‑92 (MQ=255)

                                                                                 cATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTGGGCGGACTTAACAACAATc        >  2:7256193/1‑93 (MQ=255)

                                                                                 cATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTGAGCGACCTTAACAACTATc        >  1:4379660/1‑93 (MQ=255)

                                                                                 cATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTGAGCGACCCTAACCACTATc        >  2:6603854/1‑93 (MQ=255)

                                                                                  aTGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGGGGGGTGAGCGACCTTAAAAACAATCg       >  1:9520683/1‑93 (MQ=255)

                                                                                   tGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTGAGCGACCTTAACAACTATCGa      <  1:9740707/93‑1 (MQ=255)

                                                                                    gCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTGAGCGACCTTAACAACTATCGaa     <  2:2093454/93‑1 (MQ=255)

                                                                                    gCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGGGAGGGACCTTAACAACTATCGaa     >  1:1030472/1‑93 (MQ=255)

                                                                                      tCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTGAGCGACCTTAACAACTATCGAATa   <  1:3349400/93‑1 (MQ=255)

AACGAGCACGAATGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGTATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTGAGCGACCTTAACAACTATCGAATAG  >  NC_000913/2465567‑2465746

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`