BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,472,861	T→C	G270G (GGT→GGC)	b2360 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,472,861	0	T	C	99.0%	1256.3 / 0.0	389	G270G (GGT→GGC)	b2360	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (1/3); new base C (176/208); total (178/211)
Fisher's exact test for biased strand distribution p-value = 6.29e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.72e-01

Only 100 of 395 total aligned reads displayed.

GCTGGAAGCGGTGCAGGAAGATATGGCTAACGAATTTCGTGATCTGCTTGTTGAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGTACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGCGGGGGCATTTATGGAAACGTAATTAACTCAATAATCACCGGATGGTGAGG  >  NC_000913/2472771‑2472950

gCTGGAAGCGGTGCAGGAAGATATGGCTAACGAATTTCGTGATCTGCTTGTTGAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGCAc                                                                                         <  1:6718060/93‑1 (MQ=255)

 cTGGAAGCGGTGCAGGAAGATATGGCTAACGAATTTCGTGATCTGCTTGTTGAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGCACt                                                                                        <  1:5620272/93‑1 (MQ=255)

 cTGGAAGCGGTGCAGGAAGATATGGCTAACGAATTTCGTGATCTGCTTGTTGAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGCACt                                                                                        <  2:3863006/93‑1 (MQ=255)

  tGGAAGCGGTGCAGGAAGATATGGCTAACGAATTTCGTGATCTGCTTGTTGAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGCACtt                                                                                       <  2:8467971/93‑1 (MQ=255)

  tGGAAGCGGTGCAGGAAGATATGGCTAACGAATTTCGTGATCTGCTTGTTGAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGCACtt                                                                                       <  2:4364087/93‑1 (MQ=255)

  tGGAAGCGGTGCAGGAAGATATGGCTAACGAATTTCGTGATCTGCTTGTTGAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGCACtt                                                                                       >  2:4001511/1‑93 (MQ=255)

  tGGAAGCGGTGCAGGAAGATATGGCTAACGAATTTCGTGATCTGCTTGTTGAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGCACtt                                                                                       >  1:9715824/1‑93 (MQ=255)

    gAAGCGGTGCAGGAAGATATGGCTAACGAATTTCGTGATCTGCTTGTTGAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGCACTTTc                                                                                     <  2:61713/93‑1 (MQ=255)

     aaGCGGTGCAGGAAGATATGGCTAACGAATTTCGTGATCTGCTTGTTGAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGCACTTTCa                                                                                    <  2:9671745/93‑1 (MQ=255)

      aGCGGTGCAGGAAGATATGGCTAACGAATTTCGTGATCTGCTTGTTGAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGCACTTTCAc                                                                                   <  1:1701831/93‑1 (MQ=255)

         ggTGCAGGAAGATATGGCTAACGAATTTCGTGATCTGCTTGTTGAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGCACTTTCACCGc                                                                                >  2:2779753/1‑93 (MQ=255)

         ggTGCAGGAAGATATGGCTAACGAATTTCGTGATCTGCTTGTTGAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGCACTTTCACCGc                                                                                <  2:4120708/93‑1 (MQ=255)

          gTGCAGGAAGATATGGCTAACGAATTTCGTGATCTGCTTGTTGAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGCACTTTCACCGcc                                                                               >  1:5039995/1‑93 (MQ=255)

          gTGCAGGAAGATATGGCTAACGAATTTCGTGATCTGCTTGTTGAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGCACTTTCACCGcc                                                                               >  1:4266801/1‑93 (MQ=255)

           tGCAGGAAGATATGGCTAACGAATTTCGTGATCTGCTTGTTGAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGCACTTTCACCGCCt                                                                              <  1:5894276/93‑1 (MQ=255)

            tcAGGAAGATATGGCTAACGAATTTCGTGATCTGCTTGTTGAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGCACTTTCACCGCCTg                                                                             <  1:9375772/92‑1 (MQ=255)

              aGGAAGATATGGCTAACGAATTTCGTGATCTGCTTGTTGAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGCACTTTCACCGCCTGAt                                                                           <  1:3128498/93‑1 (MQ=255)

               ggAAGATATGGCTAACGAATTTCGTGATCTGCTTGTTGAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGCACTTTCACCGCCTGAtt                                                                          <  1:1022552/93‑1 (MQ=255)

               ggAAGATATGGCTAACGAATTTCGTGATCTGCTTGTTGAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGCACTTTCACCGCCTGAtt                                                                          <  1:4732066/93‑1 (MQ=255)

               ggAAGATATGGCTAACGAATTTCGTGATCTGCTTGTTGAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGCACTTTCACCGCCTGAtt                                                                          <  1:10023300/93‑1 (MQ=255)

                gAAGATATGGCTAACGAATTTCGTGATCTGCTTGTTGAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGCACTTTCACCGCCTGAttt                                                                         >  1:3971280/1‑93 (MQ=255)

                gAAGATATGGCTAACGAATTTCGTGATCTGCTTGTTGAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGCACTTTCACCGCCTGAttt                                                                         <  2:1835967/93‑1 (MQ=255)

                gAAGATATGGCTAACGAATTGCGTGATCTGCTTGTTGAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGCACTTTCACCGCCTGAttt                                                                         <  2:5606050/93‑1 (MQ=255)

                 aaGATATGGCTAACGAATTTCGTGATCTGCTTGTTGAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGCACTTTCACCGCCTGATTTc                                                                        <  1:3722437/93‑1 (MQ=255)

                 aaGATATGGCTAACGAATTTCGTGATCTGCTTGTTGAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGCACTTTCACCGCCTGATTTc                                                                        <  1:9824095/93‑1 (MQ=255)

                 aaGATATGGCTAACGAATTTCGTGATCTGCTTGTTGAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGCACTTTCACCGCCTGATTTc                                                                        <  1:7137276/93‑1 (MQ=255)

                  aGATATGGCTAACGAATTTCGTGATCTGCTTGTTGAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGCACTTTCACCGCCTGATTTCa                                                                       <  2:903179/93‑1 (MQ=255)

                   gATATGGCTAACGAATTTCGTGATCTGCTTGTTGAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGCACTTTCACCGCCTGATTTCAt                                                                      <  1:3377546/93‑1 (MQ=255)

                   gATATGGCTAACGAATTTCGTGATCTGCTTGTTGAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGCACTTTCACCGCCTGATTTCAt                                                                      >  1:324903/1‑93 (MQ=255)

                    atatGGCTAACGAATTTCGTGATCTGCTTGTTGAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGCACTTTCACCGCCTGATTTCAtt                                                                     <  1:522391/93‑1 (MQ=255)

                    atatGGCTAACGAATTTCGTGATCTGCTTGTTGAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGCACTTTCACCGCCTGATTTCAtt                                                                     <  1:285833/93‑1 (MQ=255)

                     tatGGCTAACGAATTTCGTGATCTGCTTGTTGAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGCACTTTCACCGCCTGATTTCATTa                                                                    <  2:9756528/93‑1 (MQ=255)

                     tatGGCTAACGAATTTCGTGATCTGCTTGTTGAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGCACTTTCACCGCCTGATTTCATTa                                                                    >  1:7018169/1‑93 (MQ=255)

                       tGGCTAACGAATTTCGTGATCTGCTTGTTGAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGCACTTTCACCGCCTGATTTCATTACt                                                                  >  2:6651598/1‑93 (MQ=255)

                         gCTAACGAATTTCGTGATCTGCTTGTTGAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGCACTTTCACCGCCTGATTTCATTACTGc                                                                <  2:6847690/93‑1 (MQ=255)

                         gCTAACGAATTTCGTGATCTGCTTGTTGAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGCACTTTCACCGCCTGATTTCATTACTGc                                                                <  2:3660164/93‑1 (MQ=255)

                           tAACGAATTTCGTGATCTGCTTGTTGAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGCACTTTCACCGCCTGATTTCATTACTGCaa                                                              >  2:7393859/1‑93 (MQ=255)

                            aaCGAATTTCGTGATCTGCTTGTTGAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGCACTTTCACCGCCTGATTTCATTACTGCaaa                                                             <  2:8824138/93‑1 (MQ=255)

                            aaCGAATTTCGTGATCTGCTTGTTGAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGCACTTTCACCGCCTGATTTCATTACTGCaaa                                                             >  1:8631982/1‑93 (MQ=255)

                             aCGAATTTCGTGATCTGCTTGTTGAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGCACTTTCACCGCCTGATTTCATTACTGCAAAt                                                            >  1:2273785/1‑93 (MQ=255)

                               gAATTTCGTGATCTGCTTGTTGAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGCACTTTCACCGCCTGATTTCATTACTGCAAATGc                                                          >  1:2212785/1‑93 (MQ=255)

                                 aTTTCGTGATCTGCTTGTTGAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGCACTTTCACCGCCTGATTTCATTACTGCAAATGccc                                                        <  1:5975739/93‑1 (MQ=255)

                                 aTTTCGTGATCTGCTTGTTGAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGCACTTTCACCGCCTGATTTCATTACTGCAAATGccc                                                        <  2:5701443/93‑1 (MQ=255)

                                  tttCGTGATCTGCTTGTTGAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGCACTTTCACCGCCTGATTTCATTACTGCAAATGcccc                                                       <  2:731525/93‑1 (MQ=255)

                                  tttCGTGATCTGCTTGTTGAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGCACTTTCACCGCCTGATTTCATTACTGCAAATGcccc                                                       <  2:7666053/93‑1 (MQ=255)

                                  tttCGTGAGCTGCTTGTTGAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGCACTTTCACCGCCTGATTTCATTACTGCAAATGcccc                                                       <  2:839452/93‑1 (MQ=255)

                                   ttCGTGATCTGCTTGTTGAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGCACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCt                                                      >  1:9570250/1‑93 (MQ=255)

                                    tCGTGATCTGCTTGTTGAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGCACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTg                                                     >  2:1273480/1‑93 (MQ=255)

                                    tCGTGATCTGCTTGTTGAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGCACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTg                                                     <  2:3893435/93‑1 (MQ=255)

                                     cGTGATCTGCTTGTTGAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGCACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGc                                                    <  1:9187155/93‑1 (MQ=255)

                                     cGTGATCTGCTTGTTGAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGCACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGc                                                    <  2:9416721/93‑1 (MQ=255)

                                      gTGATCTGCTGGTTGAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGCACTGTCACCGCCTGATTTCATTACTGCAAATGCCCCTGCg                                                   >  2:7010214/1‑93 (MQ=255)

                                       tGATCTGCTTGTTGAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGCACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGCgg                                                  <  1:8521214/93‑1 (MQ=255)

                                       tGATCTGCTTGTTGAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGCACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGCgg                                                  <  1:5438445/93‑1 (MQ=255)

                                        gATCTGCTTGTTGAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGCACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGCggg                                                 <  2:6383291/93‑1 (MQ=255)

                                        gATCTGCTTGTTGAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGCACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGCggg                                                 >  2:4428027/1‑93 (MQ=255)

                                        gATCTGCTTGTTGAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGCACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGCggg                                                 <  1:4534332/93‑1 (MQ=255)

                                         aTCTGCTTGTTGAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGCACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGCgggg                                                <  1:4122710/93‑1 (MQ=255)

                                         aTCTGCTTGTTGAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGCACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGCgggg                                                >  1:1484317/1‑93 (MQ=255)

                                            tGCTTGTTGAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGCACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGCGGGGGCa                                             >  1:6460603/1‑93 (MQ=255)

                                             gCTTGTTGAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGCACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGCGGGGGCAt                                            <  2:8186900/93‑1 (MQ=255)

                                               ttgttgAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGCACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGCGGGGGCAttt                                          <  2:2182155/93‑1 (MQ=255)

                                                tgttgAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGCACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGCGGGGGCATTTa                                         <  1:2474801/93‑1 (MQ=255)

                                                tgttgAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGCACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGCGGGGGCATTTa                                         >  2:7544655/1‑93 (MQ=255)

                                                tgttgAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGCACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGCGGGGGCATTTa                                         <  2:4254821/93‑1 (MQ=255)

                                                 gttgAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGCACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGCGGGGGCATTTAt                                        <  1:8089335/93‑1 (MQ=255)

                                                     agaAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGTACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGCGGGGGCATTTATGGaa                                    <  1:9010585/93‑1 (MQ=255)

                                                     agaAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGCACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGCGGGGGCATTTATGGaa                                    <  2:1697252/93‑1 (MQ=255)

                                                      gaAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGCACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGCGGGGGCATTTATGGaaa                                   <  1:3913935/93‑1 (MQ=255)

                                                          ttCAAAGACAGCAAAGTAGAAACCTTTATTGGCACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGCGGGGGCATTTATGGAAACGTa                               >  2:1969109/1‑93 (MQ=255)

                                                           tCAAAGACAGCAAAGTAGAATCCTTTATTGGCACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGCGGGGGCATTTATGGAAACGTaa                              <  1:6209556/93‑1 (MQ=255)

                                                             aaaGACAGCGAAGTAGAAACCTTTATTGGCACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGCGGGGGCATTTATGGAAACGTAAtt                            <  2:265534/93‑1 (MQ=255)

                                                              aaGACAGCAAAGTAGAAACCTTTATTGGCACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGCGGGGGCATTTATGGAAACGTAATTa                           >  1:6030909/1‑93 (MQ=255)

                                                                gACAGCAAAGTAGAAACCTTTATTGGCACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGCGGGGGCATTTATGGAAACGTAATTAAc                         >  1:6550838/1‑93 (MQ=255)

                                                                 aCAGCAAAGTAGAAACCTTTATTGTCACTTTCACCGCCTGATTTCATTACTGCAAATGCCACTGCGGGGGCATTTATGGAAACGTAATTAACt                        <  2:7992571/93‑1 (MQ=255)

                                                                 aCAGCAAAGTAGAAACCTTTATTGGCACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGCGGGGGCATTTATGGAAACGTAATTAACt                        >  2:9839506/1‑93 (MQ=255)

                                                                  cAGCAAAGTAGAAACCTTTATTGGCACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGCGGGGGCATTTATGGAAACGTAATTAACTc                       <  1:1989792/93‑1 (MQ=255)

                                                                  cAGCAAAGTAGAAACCTTTATTGGCACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGCGGGGGCATTTATGGAAACGTAATTAACTc                       <  2:1323081/93‑1 (MQ=255)

                                                                    gCAAAGTAGAAACCTTTATTGGCACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGCGGGGGCATTTATGGAAACGTAATTAACTCaa                     <  1:7708372/93‑1 (MQ=255)

                                                                     taaaGTAGAAACCTTTATTGGCACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGCGGGGGCATTTATGGAAACGTAATTAACTCaat                    <  2:3011106/92‑1 (MQ=255)

                                                                     cAAAGTAGAAACCTTTATTGGCACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGCGGGGGCATTTATGGAAACGTAATTAACTCaat                    <  2:9528343/93‑1 (MQ=255)

                                                                      aaaGTAGAAACCTTTATTGGCACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGCGGGGGCATTTATGGAAACGTAATTAACTCaata                   <  1:8749901/93‑1 (MQ=255)

                                                                      aaaGTAGAAACCTTTATTGGCACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGCGGGGGCATTTATGGAAACGTAATTAACTCaata                   <  1:3554607/93‑1 (MQ=255)

                                                                      aaaGTAGAAACCTTTATTGGCACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGCGGGGGCATTTATGGAAACGTAATTAACTCaata                   <  2:1453684/93‑1 (MQ=255)

                                                                       aaGTAGAAACCTTTATTGGCACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGCGGGGGCATTTATGGAAACGTAATTAACTCaataa                  >  1:7849303/1‑93 (MQ=255)

                                                                       aaGTAGAAACCTTTATTGGCACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGCGGGGGCATTTATGGAAACGTAATTAACTCaataa                  <  1:8201017/93‑1 (MQ=255)

                                                                       aaGTAGAAACCTTTATTGGCACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGCGGGGGCATTTATGGAAACGTAATTAACTCaataa                  <  1:1622888/93‑1 (MQ=255)

                                                                         gTAGAAACCTTTATTGGCACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGCGGGGGCATTTATGGAAACGTAATTAACTCAATAATc                >  2:862759/1‑93 (MQ=255)

                                                                           aGAAACCTTTATTGGCACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGCGGGGGCATTTATGGAAACGTAATTAACTCAATAATCAc              <  2:3430487/93‑1 (MQ=255)

                                                                           aGAAACCTTTATTGGCACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGCGGGGGCATTTATGGAAACGTAATTAACTCAATAATCAc              >  1:839610/1‑93 (MQ=255)

                                                                            gAAACCTTTATTGGCACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGCGGGGGCATTTATGGAAACGTAATTAACTCAATAATCAcc             <  1:7268826/93‑1 (MQ=255)

                                                                             aaaCCTTTATTGGCACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGCGGGGGCATTTATGGAAACGTAATTAACTCAATAATCACCg            >  1:1310987/1‑93 (MQ=255)

                                                                                ccTTTATTGGCACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGCGGGGGCATTTATGGAAACGTAATTAACTCAATAATCACCGGAt         <  1:5101225/93‑1 (MQ=255)

                                                                                ccTTTATTGGCACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGCGGGGGCATTTATGGAAACGTAATTAACTCAATAATCACCGGAt         >  2:5237168/1‑93 (MQ=255)

                                                                                  tttATTGGCACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGCGGGGGCATTTATGGAAACGTAATTAACTCAATAATCACCGGATgg       <  2:578926/93‑1 (MQ=255)

                                                                                   ttATTGGCACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGCGGGGGCATTTATGGAAACGTAATTAACTCAATAATCACCGGATGGt      >  1:2627195/1‑93 (MQ=255)

                                                                                    tATTGGCACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGCGGGGGCATTTATGGAAACGTAATTAACTCAATAATCACCGGATGGTg     >  2:3186006/1‑93 (MQ=255)

                                                                                    tATTGGCACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGCGGGGGCATTTATGGAAACGTAATTAACTCAATAATCACCGGATGGTg     >  2:6713877/1‑93 (MQ=255)

                                                                                     aTTGGCACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGCGGGGGCATTTATGGAAACGTAATTAACTCAATAATCACCGGATGGTGa    <  2:4902139/93‑1 (MQ=255)

                                                                                      ttGGCACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGCGGGGGCATTTATGGAAACGTAATTAACTCAATAATCACCGGATGGTGAg   <  2:2398467/93‑1 (MQ=255)

GCTGGAAGCGGTGCAGGAAGATATGGCTAACGAATTTCGTGATCTGCTTGTTGAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGTACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGCGGGGGCATTTATGGAAACGTAATTAACTCAATAATCACCGGATGGTGAGG  >  NC_000913/2472771‑2472950

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`