BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,505,495	C→T	Q140Q (CAG→CAA)	b2386 ←	putative transport protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,505,495	0	C	T	100.0%	619.7 / NA	180	Q140Q (CAG→CAA)	b2386	putative transport protein
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (152/28); total (152/28)

Only 100 of 216 total aligned reads displayed.

AATAATCAGCGCACCAATGAAGGTGGACGGCACCGGCGAAGAGGTCGCCCATTGCATAGTGCTGGGATCGAAGTTCAGCAGTTGCGTCGGCTGGGTAGACATCAACCCGCCGATAAAACCAGCCGGGAACGCCAGTTTGCCACCGATAGAGTTCGCCACAAAAGCAGCAAACATCGGAA  >  NC_000913/2505405‑2505583

 ataatCAGCGCACCAATGAAGGTGGACGGCACCGGCGAAGAGGTCGCCCATTGCATAGTGCTGGGATCGAAGTTCAGCAGTTGCGTCGGTTgg                                                                                       <  2:468027/93‑1 (MQ=255)

 ataatCAGCGCACCAATGAAGGTGGACGGCACCGGCGAAGAGGTCGCCCATTGCATAGTGCTGGGATCGAAGTTCAGCAGTTGCGTCGGTTgg                                                                                       >  2:5316056/1‑93 (MQ=255)

  taatCAGCGCACCAATGAAGGTGGACGGCACCGGCGAAGAGGTCGCCCATTGCATAGTGCTGGGATCGAAGTTCAGCAGTTGCGTCGGTTggg                                                                                      >  2:9461068/1‑93 (MQ=255)

   aatCAGCGCACCAATGAAGGTGGACGGCACCGGCGAAGAGGTCGCCCATTGCATAGTGCTGGGATCGAAGTTCAGCAGTTGCGTCGGTTGGGt                                                                                     <  2:403122/93‑1 (MQ=255)

    atCAGCGCACCAATGAAGGTGGACGGCACCGGCGAAGAGGTCGCCCATTGCATAGTGCTGGGATCGAAGTTGAGCAGTTGCGTCGGTTgggca                                                                                    >  2:1520990/1‑91 (MQ=255)

    atCAGCGCACCAATGAAGGTGGACGGCACCGGCGAAGAGGTCGCCCATTGCATAGTGCTGGGATCGAAGTTCAGCAGTTGCGTCGGTTGGGTa                                                                                    >  1:845148/1‑93 (MQ=255)

     tCAGCGCACCAATGAAGGTGGACGGCACCGGCGAAGAGGTCGCCCATTGCATAGTGCTGGGATCGAAGTTCAGCAGTTGCGTCGGTTGGGTAg                                                                                   >  2:2972309/1‑93 (MQ=255)

     tCAGCGCACCAATGAAGGTGGACGGCACCGGCGAAGAGGTCGCCCATTGCATAGTGCTGGGATCGAAGTTCAGCAGTTGCGTCGGTTGGGTAg                                                                                   <  1:9761703/93‑1 (MQ=255)

      cAGCGCACCAATGAAGGTGGACGGCACCGGCGAAGAGGTCGCCCATTGCATAGTGCTGGGATCGAAGTTCAGCAGTTGCGTCGGTTGGGTAGa                                                                                  <  2:492860/93‑1 (MQ=255)

      cAGCGCACCAATGAAGGTGGACGGCACCGGCGAAGAGGTCGCCCATTGCATAGTGCTGGGATCGAAGTTCAGCAGTTGCGTCGGTTGGGTAGa                                                                                  <  1:9299090/93‑1 (MQ=255)

      cAGCGCACCAATGAAGGTGGACGGCACCGGCGAAGAGGTCACCCATTGCATAGTGCTGGGATCGAAGTTCAGCAGTTGCGTCGGTTGGGTAGa                                                                                  <  1:8146842/93‑1 (MQ=255)

       aGCGCACCAATGAAGGTGGACGGCACCGGCGAAGAGGTCGCCCATTGCATAGTGCTGGGATCGAAGTTCAGCAGTTGCGTCGGTTGGGTAGAc                                                                                 <  1:1534701/93‑1 (MQ=255)

       aGCGCACCAATGAAGGTGGACGGCACCGGCGAAGAGGTCGCCCATTGCATAGTGCTGGGATCGAAGTTCAGCAGTTGCGTCGGTTGGGTAGAc                                                                                 >  2:1174541/1‑93 (MQ=255)

        gcgcACCAATGAAGGTGGACGGCACCGGCGAAGAGGTCGCCCATTGCATAGTGCTGGGATCGAAGTTCAGCAGTTGCGTCGGTTGGGTAGACa                                                                                >  2:7747070/1‑93 (MQ=255)

        gcgcACCAATGAAGGTGGACGGCACCGGCGAAGAGGTCGCCCATTGCATAGTGCTGGGATCGAAGTTCAGCAGTTGCGTCGGTTGGGTAGACa                                                                                >  1:7299248/1‑93 (MQ=255)

        gcgcACCAATGAAGGTGGACGGCACCGGCGAAGAGGTCGCCCATTGCATAGTGCTGGGATCGAAGTTCAGCAGTTGCGTCGGTTGGGTAGACa                                                                                >  1:8981331/1‑93 (MQ=255)

           cACCAATGAAGGTGGACGGCACCGGCGAAGAGGTCGCCCATTGCATAGTGCTGGGATCGAAGTTCAGCAGTTGCGTCGGTTGGGTAGACATCa                                                                             >  2:4804985/1‑93 (MQ=255)

            aCCAATGAAGGTGGACGGCACCGGCGAAGAGGTCGCCCATTGCATAGTGCTGGGATCGAAGTTCAGCAGTTGCGTCGGTTGGGTAGACATCaa                                                                            <  1:6016459/93‑1 (MQ=255)

             ccAATGAAGGTGGACGGCACCGGCGAAGAGGTCGCCCATTGCATAGTGCTGGGATCGAAGTTCAGCAGTTGCGTCGGTTGGGTAGACATCAAc                                                                           >  2:6850494/1‑93 (MQ=255)

             ccAATGAAGGTGGACGGCACCGGCGAAGAGGTCGCCCATTGCATAGTGCTGGGATCGAAGTTCAGCAGTTGCGTCGGTTGGGTAGACATCAAc                                                                           <  1:6048819/93‑1 (MQ=255)

              cAATGAAGGTGGACGGCACCGGCGAAGAGGTCGCCCATTGCATAGTGCTGGGATCGAAGTTCAGCAGTTGCGTCGGTTGGGTAGACATCAAcc                                                                          >  1:7383926/1‑93 (MQ=255)

              cAATGAAGGTGGACGGCACCGGCGAAGAGGTCGCCCATTGCATAGTGCTGGGATCGAAGTTCAGCAGTTGCGTCGGTTGGGTAGACATAAAcc                                                                          >  2:2722332/1‑93 (MQ=255)

                aTGAAGGTGGACGGCACCGGCGAAGAGGGCGCCCATTGCATAGTGCTGGGATCGAAGTTCAGCAGTTGCGTCGGTTGGGGAGACATCAACccg                                                                        >  1:4891441/1‑93 (MQ=255)

                 tGAAGGTGGACGGCACCGGCGAAGAGGTCGCCCATTGCATAGTGCTGGGATCGAAGTTCAGCAGTTGCGTCGGTTGGGTAGACATCCACccgc                                                                       >  2:2743058/1‑93 (MQ=255)

                 tGAAGGTGGACGGCACCGGCGAAGAGGTCGCCCATTGCATAGTGCTGGGATCGAAGTTCAGCAGTTGCGTCGGTTGGGTAGACATCAACccgc                                                                       <  2:754988/93‑1 (MQ=255)

                 tGAAGGTGGACGGCACCGGCGAAGAGGTCGCCCATTGCATAGTGCTGGGATCGAAGTTCAGCAGTTGCGTCGGTTGGGTAGACATCAACccgc                                                                       >  2:2122946/1‑93 (MQ=255)

                  gAAGGTGGACGGCACCGGCGAAGAGGTCGCCCATTGCATAGTGCTGGGATCGAAGTTCAGCAGTTGCGTCGGTTGGGTAGACATCAACccgcc                                                                      >  1:1421995/1‑93 (MQ=255)

                  gAAGGTGGACGGCACCGGCGAAGAGGTCGCCCATTGCATAGTGCTGGGATCGAAGTTCAGCAGTTGCGTCGGTTGGGTAGACATCAACccgcc                                                                      <  1:3158562/93‑1 (MQ=255)

                   aaGGTGGACGGCACCGGCGAAGAGGTCGCCCATTGCATAGTGCTGGGATCGAAGTTCAGCAGTTGCGTCGGTTGGGTAGACATCAACccgccg                                                                     >  2:9122190/1‑93 (MQ=255)

                    aGGTGGACGGCACCGGCGAAGAGGTCGCCCATTGCATAGTGCTGGGATCGAAGTTCAGCAGTTGCGTCGGTTGGGTAGACATCAACCCGCCGa                                                                    >  1:439749/1‑93 (MQ=255)

                        ggACGGCACCGGCGAAGAGGTCGCCCATTGCATAGTGCTGGGATCGAAGTTCAGCAGTTGCGTCGGTTGGGTAGACATCAACCCGCCGATaaa                                                                >  1:3864233/1‑93 (MQ=255)

                        ggACGGCACCGGCGAAGAGGTCGCCCATTGCATAGTGCTGGGATCGAAGTTCAGCAGTTGCGTCGGTTGGGTAGACATCAACCCGCCGATaaa                                                                >  1:4514912/1‑93 (MQ=255)

                            ggCACCGGCGAAGAGGTCGCCCATTGCATAGTGCTGGGATCGAAGTTCAGCAGTTGCGTCGGTTGGGTAGACATCAACCCGCCGATAAAACCa                                                            >  2:26289/1‑93 (MQ=255)

                             gCACCGGCGAAGAGGTCGCCCATTGCATAGTGCTGGGATCGAAGTTCAGCAGTTGCGTCGGTTGGGTAGACATCAACCCGCCGATAAAACCAg                                                           >  1:3799565/1‑93 (MQ=255)

                              cACGGGCGAAGAGGTCGCCCTTTGCATAGTGCTGGGATCGAAGTTCAGCAGTTGCGTGGGTTGGGTAGACATCACCCCGCCGATAAAACCAGc                                                          <  2:1467655/93‑1 (MQ=255)

                                ccGGCGAAGAGGTCGCCCATTGCATAGTGCTGGGATCGAAGTTCAGCAGTTGCGTCGGTTGGGTAGACATCAACCCGCCGATAAAACCAGCCg                                                        >  1:5941915/1‑93 (MQ=255)

                                 cGGGGAGGAGGTCGCCCATTGCATAGTGCGGGGATCGAAGTTCAGCGGTTGCGTGGGTTGGGTAGACATCACCCCGCCGATAAAACCAGCCgg                                                       <  2:4593768/93‑1 (MQ=255)

                                  ggCGAAGAGGTCGCCCATTGCATAGTGCTGGGATCGAAGTTCAGCAGTTGCGTCGGTTGGGTAGACATCAACCCGCCGATAAAACCAGCCggg                                                      >  1:3720993/1‑93 (MQ=255)

                                   gaaaaGAGGTCCCCCATTAAATGGTGCGGGGATCAAAGTTCAGCATTGGGTTGGGTTGGGAAGAAATCACCCCGCCGATAAAACCAGCCGGGa                                                     <  2:3313639/90‑1 (MQ=255)

                                   gCGAAGAGGTCGCCCATTGCATAGTGCTGGGATCGAAGTTCAGCAGTTGCGTCGGTTGGGTAGACATCAACCCGCCGATAAAACCAGCCGGGa                                                     >  1:5794705/1‑93 (MQ=255)

                                   gCGAAGAGGTCGCCCATTGCATAGTGCTGGGATCGAAGTTCAGCAGTTGCGTCGGTTGGGTAGACATCAACCCGCCGATAAAACCAGCCGGGa                                                     >  1:3448012/1‑93 (MQ=255)

                                    cGAAGAGGTCGCCCATTGCATAGTGCTGGGATCGAAGTTCAGCAGTTGCGTCGGTTGGGTAGACATCAACCCGCCGATAAAACCAGCCGGGaa                                                    >  2:3404310/1‑93 (MQ=255)

                                      aaGAGGTCGCCCATTGCATAGTGCTGGGATCGAAGTTCAGCAGTTGCGTCGGTTGGGTAGACATCAACCCGCCGATAAAACCAGCCGGGAACg                                                  >  2:2369769/1‑93 (MQ=255)

                                       agagGTCGCCCATTGCATAGTGCTGGGATCGAAGTTCAGCAGTTGCGTCGGTTGGGTAGACATCAACCCGCCGATAAAACCAGCCGGGAACGc                                                 >  1:7769326/1‑93 (MQ=255)

                                          ggTCGCCCATTGCATAGTGCTGGGATCGAAGTTCAGCAGTTGCGTCGGTTGGGTAGACATCAACCCGCCGATAAAACCAGCCGGGAACGCCAg                                              >  1:2071627/1‑93 (MQ=255)

                                            tCGCCCATTGCATAGTGCTGGGATCGAAGTTCAGCAGTTGCGTCGGTTGGGTAGACATCAACCCGCCGATAAAACCAGCCGGGAACGCCAGtt                                            >  1:330948/1‑93 (MQ=255)

                                              gCCCATTGCATAGTGCTGGGATCGAAGTTCAGCAGTTGCGTCGGTTGGGTAGACATCAACCCGCCGATAAAACCAGCCGGGAACGCCAGTTTg                                          >  1:1662759/1‑93 (MQ=255)

                                               cccATTGCATAGTGCTGGGATCGAAGTTCAGCAGTTGCGTCGGTTGGGTAGACATCAACCTGCCGATAAAACCAGCCGGGAACGACAGTTTGc                                         >  1:1755139/1‑93 (MQ=255)

                                                ccATTGCATAGTGCTGGGATCGAAGTTCAGCAGTTGCGTCGGTTGGGTAGACATCAACCCGCCGATAAAACCAGCCGGGAACGCCAGTTTGcc                                        >  2:1981242/1‑93 (MQ=255)

                                                ccATTGCATAGTGCTGGGATCGAAGTTCAGCAGTTGCGTCGGTTGGGTAGACATCAACCCGCCGATAAAACCAGCCGGGAACGCCAGTTTGcc                                        >  1:5154311/1‑93 (MQ=255)

                                                 cATTGCATAGTGCTGGGATCGAAGTTCAGCAGTTGCGTCGGTTGGGTAGACATCAACCCGCCGATAAAAGCAGCCGGGAACGCCAGTTTGCCa                                       >  1:7909838/1‑93 (MQ=255)

                                                 cATTGCATAGTGCTGGGATCGAAGTTCAGCAGTTGCGTCGGTTGGGTAGACATCAACCCGCCGATAAAACCAGCCGGGAACGCCAGTTTGCCa                                       >  1:6340562/1‑93 (MQ=255)

                                                 cATTGCATAGTGCTGGGATCGAAGTTCAGCAGTTGCGTCGGTTGGGTAGACATCAACCCGCCGATAAAACCAGCCGGGAACGCCAGTTTGCCa                                       >  1:6169274/1‑93 (MQ=255)

                                                  aTTGCATAGTGCTGGGATCGAAGTTCAGCAGTTGCGTCGGTTGGGTAGACATCAACCCGCCGATAAAACCAGCCGGGAACGCCAGTTTGCCAc                                      >  2:3182400/1‑93 (MQ=255)

                                                  aTTGCATAGTGCTGGGATCGAAGTTCAGCAGTTGCGTCGGTTGGGTAGACATCAACCCGCCGATAAAACCAGCAGGGAACGCCAGTTTGCCAc                                      >  1:2555875/1‑93 (MQ=255)

                                                  aTTGCATAGTGCTGGGATCGAAGTTCAGCAGTTGAGTCGGTTGGGGAGACATCAACCCGCCGATAAAACTAGCCGGGGACGCCAGTGTGCCAc                                      >  1:3956821/1‑93 (MQ=255)

                                                   ttGCATAGTGCTGGGATCGAAGTTCAGCAGTTGCGTCGGTTGGGTAGACATCAACCCGCCGATAAAACCAGCCGGGAACGCCAGTTTGCCAcc                                     >  1:5455504/1‑93 (MQ=255)

                                                      cATTGTGGTGGAATGGAAGTTCAGCAGTGGCGTTGTTGGGGTAAACACCACCCCGCCGATAAAACCAGCCGGGAACGCCAGTTTGCCACCGAt                                  <  1:2274242/93‑1 (MQ=255)

                                                         aGTGCTGGGATCGAAGTTCAGCAGTTGCGTCGGTTGGGTAGACATCAACCCGCCGATAAAACCAGCCGGGAACGCCAGTTTGCCACCGATaga                               >  1:2950699/1‑93 (MQ=255)

                                                         aGTGCGGGAATCAAGTTTCAGCAGTTGCGTGGGTTGGGTAGACATCACCCCGCCGATAAAACCAGCCGGGAACGCCAGTTTGCCACCGATaga                               <  2:1671325/93‑1 (MQ=255)

                                                          gTGCTGGAATCAAAGTTCAGCGGTTGCGTCGTTGGGGTAGACACCACCCCGCCGATAAAACCAGCCGGGAACGCCAGTTTGCCACCGATagag                              <  1:4480841/93‑1 (MQ=255)

                                                           tGCTGGGATCGAAGTTCAGCAGTTGCGTCGGTTGGGTAGACATCAACCCGCCGATAAAACCAGCCGGGAACGCCAGTTTGCCACCGATAGAGt                             >  1:6960/1‑93 (MQ=255)

                                                            gcggggATCGAAGTTCAGCGGTTGGGTGGTTGGGGAAGACACCACCCCGCCGATAAAACCAGCCGGGAACGCCAGTTTGCCACCGATAGAGtt                            <  2:9716454/90‑1 (MQ=255)

                                                            gCTGGGATCGAAGTTCAGCAGTTGCGTCGGTTGGGTAGACATCAACCCGCAGATAAAACCAGCCGGGAACGCCAGTTTGCCACCGATAGAGtt                            >  1:8245454/1‑93 (MQ=255)

                                                             gggggAGCGAGGTTCAGCTGTGGGGGTGTTTGGGTAGACAACACCCCGCCGATAAAACCAGCCGGGAACGCCAGTTTGCCACCGATAGAGTTc                           <  1:6444883/91‑1 (MQ=255)

                                                             cTGGGATCGAAGTTCAGCAGTTGCGTCGGTTGGGTAGACATCAACCCGCCGATAAAACCAGCCGGGAACGCCAGTTTGCCACCGATAGAGTTc                           >  2:4383939/1‑93 (MQ=255)

                                                             cTGGGATCGAAGTTCAGCAGTTGCGTCGGTTGGGTAGACATCAACCCGCCGATAAAACCAGCCGGGAACGCCAGTTTGCCACCGATAGAGTTc                           >  2:5835918/1‑93 (MQ=255)

                                                               gggATCAAGTTTAAGCGGTTGCGTGGGTGGGGAAGACACCACCCCGCCGATAAAACCAGCCGGGAACGCCAGTTTGCCACCGATAGAGTTCGc                         <  2:5985170/93‑1 (MQ=255)

                                                                ggATCGAAGTTCAGCAGTTGCGTCGGTTGGGTAGACATCAACCCGCCGATAAAACCAGCCGGGAACGCCAGTTTGCCACCGATAGAGTTCGcc                        >  2:8481038/1‑93 (MQ=255)

                                                                ggATCGAAGTTCAGCAGTTGCGTCGGTTGGGTAGACATCAACCCGCCGATAAAACCAGCCGGGAACGCCAGTTTGCCACCGATAGAGTTCGcc                        >  1:3322230/1‑93 (MQ=255)

                                                                 gATCGAAGTTCAGCAGTTGCGTCGGTTGGGTAGACATCAACCCGCCGATAAAACCAGCCGGGAACGCCAGTTTGCCACCGATAGAGTTCGCca                       >  2:2255372/1‑93 (MQ=255)

                                                                  aTCGAAGTTCAGCAGTTGCGTCGGTTGGGTAGACATCAACCCGCCGATAAAACCAGCCGGGAACGCCAGTTTGCCACCGATAGAGTTCGCcac                      >  1:805363/1‑93 (MQ=255)

                                                                  aTCGAAGTTCAGCAGTTGCGTCGGTTGGGTAGACATCAACCCGCCGATAAAACCAGCCGGGAACGCCAGTTTGCCACCGATAGAGTTCGCcac                      >  2:9679475/1‑93 (MQ=255)

                                                                   tCGAAGTTCAGCAGTTGCGTCGGTTGGGTAGACATCAACCCGCCTATAAAACCAGCCGGGAACGCCAGTTTGCCACCGATAGAGTTCGCcaca                     >  2:7306421/1‑93 (MQ=255)

                                                                     gAAGTTCAGCAGTTGCGTCGGTTGGGTAGACATCAACCCGCCGATAAAACCAGCCGGGAACGCCAGTTTGCCACCGATAGAGTTCGTCACaaa                   >  2:7506222/1‑93 (MQ=255)

                                                                     gAAGTTCAGCAGTTGCGTCGGTTGGGTAGACATCAACCCGCCGATAAAACCAGCCGGGAACGCCAGTTTGCCACCGATAGAGTTCGCCACaaa                   >  2:1256143/1‑93 (MQ=255)

                                                                      aaGTTCAGCAGTTGCGTCGGTTGGGTAGACATCAACCCGCCGATAAAACCAGCCGGGAACGCCAGTTTGCCACCGATAGAGTTCGCCACaaaa                  >  2:7721474/1‑93 (MQ=255)

                                                                      aaGTTCACCAGTTGCGTGGGTGGGGTAGCCACCACCCCGCCGATAAAACCAGCCGGGAACGCCAGTTTGCCACCGATAGAGTTCGCCACaaaa                  <  2:4845807/93‑1 (MQ=255)

                                                                        gTTCAGCAGTTGCGTCGGTTGGGTAGACATCAACCCGCCGATAAAACCAGCCGGGAACGCCAGTTTGCCACCGATAGAGTTCGCCACAAAagc                >  1:8537114/1‑93 (MQ=255)

                                                                         ttCAGCGGTGGGGTCGGTTGGGTAGACACCACCCCGCCGATAAAACCAGCCGGGAACGCCAGTTTGCCACCGATAGAGTTCGCCACAAAagca               <  2:202494/93‑1 (MQ=255)

                                                                           cagcagTTGCGTCGGTTGGGTAGACATCAACCCGCCGATAAAACCAGCCGGGAACGCCAGTTTGCCACCGATAGAGTTCGCCACAAAagcagc             >  2:6154244/1‑93 (MQ=255)

                                                                           cagcagTTGCGTCGGTTGGGTAGACATCAACCCGCCGATAAAACCAGCCGGGAACGCCAGTTTGCCACCGATAGAGTTCGCCACAAAagcagc             >  2:6180216/1‑93 (MQ=255)

                                                                           cagcagTTGCGTCGGTTGGGTAGACATCAACCCGCCGATAAAACCAGCCGGGAACGCCAGTTTGCCACCGATAGAGTTAGCCACAAAagcagc             >  1:1065634/1‑93 (MQ=255)

                                                                            agcggTTGCGTGGGTTGGGTAAACACGCCCCCGCCGATAAAACCAGCCGGGAACGCCAGTTTGCCACCGATAGAGTTCGCCACAAAAgcagca            <  1:6660177/93‑1 (MQ=255)

                                                                             gcagTTGCGTCGGTTGGGTAGACATCAACCCGCCGATAAAACCAGCCGGGAACGCCAGTTTGCCACCGATAGAGTTCGCCACAAAAGCAGCaa           >  1:5836128/1‑93 (MQ=255)

                                                                               agTTGCGTCGGTTGGGTAGACATCAACCCGCCGATAAAACCAGCCGGGAACGCCAGTTTGCCACCGATAGAGTTCGCCACAAAAGCAGCAAAc         >  2:3937442/1‑93 (MQ=255)

                                                                               agTTGCGTCGGTTGGGTAGACATCAACCCGCCGATAAAACCAGCCGGGAACGCCAGTTTGCCACCGATAGAGTTCGCCACAAAAGCAGCAAAc         >  2:9062622/1‑93 (MQ=255)

                                                                                gTTGCGTGGGTTGGGAAGCAACCACCCCGCCGATAAAACCAGCCGGGAACGCCAGTTTGCCACCGATAGAGTTCGCCACAAAAGCAGCAAACa        <  1:9805269/93‑1 (MQ=255)

                                                                                gTTGCGTCGGTTGGGTAGACATCAACCCGCCGATAAAACCAGCCGGGAACGCCAGTTTGCCACCGATAGAGTTCGCCACAAAAGCAGCAAACa        >  1:9161061/1‑93 (MQ=255)

                                                                                 ttGCGTCGGTTGGGTAGACATCAACCCGCCGATAAAACCAGCCGGGAACGCCAGTTTGCCACCGATAGAGTTCGCCACAAAAGCAGCAAACAt       >  1:9540933/1‑93 (MQ=255)

                                                                                 ttGCGTCGGTTGGGTAGACATCAACCCGCCGATAAAACCAGCCGGGAACGCCAGTTTGCCACCGATAGAGTTCGCCACAAAAGCAGCAAACAt       >  2:5223664/1‑93 (MQ=255)

                                                                                 ttGCGTCGGTTGGGTAGACATCAACCCGCCGATAAAACCAGCCGGGAACGCCAGTTTGCCACCGATAGAGTTCGCCACAAAAGCAGCAAACAt       >  2:5023676/1‑93 (MQ=255)

                                                                                 ttGCGTCGGTTGGGTAGACATCAACCCGCCGATAAAACCAGCCGGGAACGCCAGTTTGCCACCGATAGAGTTCGCCACAAAAGCAGCAAACAt       >  1:7221897/1‑93 (MQ=255)

                                                                                 ttGCGTCGGTTGGGTAGACATCAACCCGCCGATAAAACCAGCCGGGAACGCCAGTTTGCCACCGATAGAGTTCGCCACAAAAGCAGCAAACAt       >  1:4780567/1‑93 (MQ=255)

                                                                                   gCGTCGGTTGGGTAGACATCAACCCGCCGATAAAACCAGCCGGGAACGCCAGTTTGCCACCGATAGAGTTCGCCACAAAAGCAGCAAACATCg     >  2:1062487/1‑93 (MQ=255)

                                                                                   gCGTCGGTTGGGTAGACATCAACCCGCCGATAAAACCAGCCGGGAACGCCAGTTTGCCACCGATAGAGTTCGCCACAAAAGCAGCAAACATCg     >  1:1883132/1‑93 (MQ=255)

                                                                                      tCGGTTGGGTAGACATCAACCCGCCGATAAAACCAGCCGGGAACGCCAGTTTGCCACCGATAGAGTTCGCCACAAAAGCAGCAAACATCGGaa  >  2:4142031/1‑93 (MQ=255)

                                                                                      tCGGTTGGGTAGACATCAACCCGCCGATAAAACCAGCCGGGAACGCCAGTTTGCCACCGATAGAGTTCGCCACAAAAGCAGCAAACATCGGaa  >  1:8916310/1‑93 (MQ=255)

                                                                                      tCGGTTGGGTAGACATCAACCCGCCGATAAAACCAGCCGGGAACGCCAGTTTGCCACCGATAGAGTTCGCCACAAAAGCAGCAAACATCGGaa  >  1:6561103/1‑93 (MQ=255)

                                                                                      tCGGTTGGGTAGACATCAACCCGCCGATAAAACCAGCCGGGAACGCCAGATTGCCACCGATAGAGATCGCCACAAAAGCAGCAAACATCGGaa  >  2:9776032/1‑93 (MQ=255)

AATAATCAGCGCACCAATGAAGGTGGACGGCACCGGCGAAGAGGTCGCCCATTGCATAGTGCTGGGATCGAAGTTCAGCAGTTGCGTCGGCTGGGTAGACATCAACCCGCCGATAAAACCAGCCGGGAACGCCAGTTTGCCACCGATAGAGTTCGCCACAAAAGCAGCAAACATCGGAA  >  NC_000913/2505405‑2505583

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`