BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,562,351	G→A	G118S (GGC→AGC)	b2449 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,562,351	0	G	A	100.0%	1607.5 / NA	431	G118S (GGC→AGC)	b2449	hypothetical protein
Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (214/217); total (214/217)

Only 100 of 448 total aligned reads displayed.

ATCCTGGTAAAATACCATTTCAGCAATGAAACTGAGTTCAAACTTAAAGCGGCAGCGGTCAGAGAATGCGCCAACGTAGCAGAAAACAACGGCTTTGTTTTGGTAGGTAGAGTATTTGAAAAACGTAATTGATTGCGAATAGCAACAACTAAACAACCAATACACCCGGCCCCTCGCCGG  >  NC_000913/2562261‑2562440

aTCCTGGTAAAATACCATTTCAGCAATGAAACTGAGTTCAAACTTAAAGCGGCAGCGGTCAGAGAATGCGCCAACGTAGCAGAAAACAACAGc                                                                                         >  1:6695610/1‑93 (MQ=255)

aTCCTGGTAAAATACCATTTCAGCAATGAAACTGAGTTCAAACTTAAAGCGGCAGCGGTCAGAGAATGCGCCAACGTAGCAGAAAACAACAGc                                                                                         >  1:6238126/1‑93 (MQ=255)

 tCCTGGTAAAATACCATTTCAGCAATGAAACTGAGTTCAAACTTAAAGCGGCAGCGGTCAGAGAATGCGCCAACGTAGCAGAAAACAACAGCt                                                                                        >  2:5922966/1‑93 (MQ=255)

 tCCTGGTAAAATACCATTTCAGCAATGAAACTGAGTTCAAACTTAAAGCGGCAGCGGTCAGAGAATGCGCCAACGTAGCAGAAAACAACAGCt                                                                                        <  1:5598086/93‑1 (MQ=255)

  ccTGGTAAAATACCATTTCAGCAATGAAACTGAGTTCAAACTTAAAGCGGCAGCGGTCAGAGAATGCGCCAACGTAGCAGAAAACAACAGCtt                                                                                       <  2:930195/93‑1 (MQ=255)

     ggTAAAATACCATTTCAGCAATGAAACTGAGTTCAAACTTAAAGCGGCAGCGGTCAGAGAATGCGCCAACGTAGCAGAAAACAACAGCTTTGt                                                                                    <  1:8604117/93‑1 (MQ=255)

       tAAAATACCATTTCAGCAATGAAACTGAGTTCAAACTTAAAGCGGCAGCGGTCAGAGAATGCGCCAACGTAGCAGAAAACAACAGCTTTGttt                                                                                  <  2:6250559/93‑1 (MQ=255)

         aaaTACCATTTCAGCAATGAAACTGAGTTCAAACTTAAAGCGGCAGCGGTCAGAGAATGCGCCAACGTAGCAGAAAACAACAGCTTTGTTTTg                                                                                >  1:8894003/1‑93 (MQ=255)

         aaaTACCATTTCAGCAATGAAACTGAGTTCAAACTTAAAGCGGCAGCGGTCAGAGAATGCGCCAACGTAGCAGAAAACAACAGCTTTGTTTTg                                                                                >  1:2195505/1‑93 (MQ=255)

         aaaTACCATTTCAGCAATGAAACTGAGTTCAAACTTAAAGCGGCAGCGGTCAGAGAATGCGCCAACGTAGCAGAAAACAACAGCTTTGTTTTg                                                                                <  1:6159069/93‑1 (MQ=255)

          aaTACCATTTCAGCAATGAAACTGAGTTCAAACTTAAAGCGGCAGCGGTCAGAGAATGCGCCAACGTAGCAGAAAACAACAGCTTTGTTTTgg                                                                               >  1:6600255/1‑93 (MQ=255)

            tACCATTTCAGCAATGAAACTGAGTTCAAACTTAAAGCGGCAGCGGTCAGAGAATGCGCCAACGTAGCAGAAAACAACAGCTTTGTTTTggta                                                                             <  1:8514195/93‑1 (MQ=255)

            tACCATTTCAGCAATGAAACTGAGTTCAAACTTAAAGCGGCAGCGGTCAGAGAATGCGCCAACGTAGCAGAAAACAACAGCTTTGTTTTggta                                                                             <  2:2384327/93‑1 (MQ=255)

            tACCATTTCAGCAATGAAACTGAGTTCAAACTTAAAGCGGCAGCGGTCAGAGAATGCGCCAACGTAGCAGAAAACAACAGCTTTGTTTTggta                                                                             <  2:1090140/93‑1 (MQ=255)

             aCCATTTCAGCAATGAAACTGAGTTCAAACTTAAAGCGGCAGCGGTCAGAGAATGCGCCAACGTAGCAGAAAACACCAGCTTTGTTTTggtag                                                                            <  1:4375406/93‑1 (MQ=255)

             aCCATTTCAGCAATGAAACTGAGTTCAAACTTAAAGCGGCAGCGGTCAGAGAATGCGCCAACGTAGCAGAAAACAACAGCTTTGTTTTggtag                                                                            <  2:6619507/93‑1 (MQ=255)

             aCCATTTCAGCAATGAAACTGAGTTCAAACTTAAAGCGGCAGCGGTCAGAGAATGCGCCAACGGAGCAGAAAACAACAGCTTTGTTTTggtag                                                                            >  1:3497281/1‑93 (MQ=255)

               cATTTCAGCAATGAAACTGAGTTCAAACTTAAAGCGGCAGCGGTCAGAGAATGCGCCAACGTAGCAGAAAACAACAGCTTTGTTTTggtaggt                                                                          <  2:5228289/93‑1 (MQ=255)

               cATTTCAGCAATGAAACTGAGTTCAAACTTAAAGCGGCAGCGGTCAGAGAATGCGCCAACGTAGCAGAAAACAACAGCTTTGTTTTggtaggt                                                                          <  2:4957343/93‑1 (MQ=255)

                 tttCAGCAATGAAACTGAGTTCAAACTTAAAGCGGCAGCGGTCAGAGAATGCGCCAACGTAGCAGAAAACAACAGCTTTGTTTTGgtaggtag                                                                        >  2:9608967/1‑93 (MQ=255)

                 tttCAGCAATGAAACTGAGTTCAAACTTAAAGCGGCAGCGGTCAGAGAATGCGCCAACGTAGCAGAAAACAACAGCTTTGTTTTGgtaggtag                                                                        <  1:5306593/93‑1 (MQ=255)

                  ttCAGCAATGAACCTGAGTTCAAACTTAAAACGGCAGCGGTCAGAGAATGCGCCAACGTAGCAGAAAACAACAGCTTTGATTTGGTAGGTaga                                                                       <  2:8936662/93‑1 (MQ=255)

                  ttCAGCAATGAAACTGAGTTCAAACTTAAAGCGGCAGCGGTCAGAGAATGCGCCAACGTAGCAGAAAACAACAGCTTTGTTTTGGTAGGTaga                                                                       >  1:8778716/1‑93 (MQ=255)

                  ttCAGCAATGAAACTGAGTTCAAACTTAAAGCGGCAGCGGTCAGAGAATGCGCCAACGTAGCAGAAAACAACAGCTTTGTTTTGGTAGGTaga                                                                       >  1:9396662/1‑93 (MQ=255)

                   tCAGCAATGAAACTGAGTTCAAACTTAAAGCGGCAGCGGTCAGAGAATGCGCCAACGTAGCAGAAAACAACAGCTTTGTTTTGGTAGGTagag                                                                      >  2:6395290/1‑93 (MQ=255)

                   tCAGCAATGAAACTGAGTTCAAACTTAAAGCGGCAGCGGTCAGAGAATGCGCCAACGTAGCAGAAAACAACAGCTTTGTTTTGGTAGGTagag                                                                      <  2:5678805/93‑1 (MQ=255)

                    cAGCAATGAAACTGAGTTCAAACTTAAAGCGGCAGCGGTCAGAGAATGCGCCAACGTAGCAGAAAACAACAGCTTTGTTTTGGTAGGTAGAGt                                                                     <  1:1231736/93‑1 (MQ=255)

                    cAGCAATGAAACTGAGTTCAAACTTAAAGCGGCAGCGGTCAGAGAATGCGCCAACGTAGCAGAAAACAACAGCTTTGTTTTGGTAGGTAGAGt                                                                     <  2:2671702/93‑1 (MQ=255)

                    cAGCAATGAAACTGAGTTCAAACTTAAAGCGGCAGCGGTCAGAGAATGCGCCAACGTAGCAGAAAACAACAGCTTTGTTTTGGTAGGTAGAGt                                                                     <  1:453771/93‑1 (MQ=255)

                     aGCAATGAAACTGAGTTCAAACTTAAAGCGGCAGCGGTCAGAGAATGCGCCAACGTAGCAGAAAACAACAGCTTTGTTTTGGTAGGTAGAGTa                                                                    <  1:8453865/93‑1 (MQ=255)

                      gCAATGAAACTGAGTTCAAACTTAAAGCGGCAGCGGTCAGAGAATGCGCCAACGTAGCAGAAAACAACAGATTTGTTTTGGTAGGTAGAGTAt                                                                   >  2:3572347/1‑93 (MQ=255)

                       cAATGAAACTGAGTTCAAACTTAAAGCGGCAGCGGTCAGAGAATGCGCCAACGTAGCAGAAAACAACAGCTTTGTTTTGGTAGGTAGAGTAtt                                                                  <  2:1969133/93‑1 (MQ=255)

                         aTGAAACTGAGTTCAAACTTAAAGCGGCAGCGGTCAGAGAATGCGCCAACGTAGCAGAAAACAACAGCTTTGTTTTGGTAGGTAGAGTATTTg                                                                >  2:4126645/1‑93 (MQ=255)

                             aaCTGAGTTCAAACTTAAAGCGGCAGCGGTCAGAGAATGCGCCAACGTAGCAGAAAACAACAGCTTTGTTTTGGTAGGTAGAGTATTTGaaaa                                                            >  2:778855/1‑93 (MQ=255)

                              aCTGAGTTCAAACTTAAAGCGGCAGCGGTCAGAGAATGCGCCAACGTAGCAGAAAACAACAGCTTTGTTTTGGTAGGTAGAGTATTTGaaaaa                                                           <  2:8757931/93‑1 (MQ=255)

                               cTGAGTTCAAACTTAAAGCGGCAGCGGTCAGAGAATGCGCCAACGTAGCAGAAAACAACAGCTTTGTTTTGGTAGGTAGAGTATTTGAAAAAc                                                          <  1:7902344/93‑1 (MQ=255)

                                tGAGTTCAAACTTAAAGCGGCAGCGGTCAGAGAATGCGCCAACGTAGCAGAAAACAACAGCTTTGTTTTGGTAGGTAGAGTATTTGAAAAACg                                                         <  1:466835/93‑1 (MQ=255)

                                  aGTTCAAACTTAAAGCGGCAGCGGTCAGAGAATGCGCCAACGTAGCAGAAAACAACAGCTTTGTTTTGGTAGGTAGAGTATTTGAAAAACGTa                                                       <  1:2807810/93‑1 (MQ=255)

                                   gTTCAAACTTAAAGCGGCAGCGGTCAGAGAATGCGCCAACGTAGCAGAAAACAACAGCTTTGTTTTGGTAGGTAGAGTATTTGAAAAACGTaa                                                      <  1:2644366/93‑1 (MQ=255)

                                     tCAAACTTAAAGCGGCAGCGGTCAGAGAATGCGCTAACGTAGCAGAAAACAACAGCTTTGTTTTGGTAGGTAGAGTATTTGAAAAACGTAatt                                                    <  1:4270524/93‑1 (MQ=255)

                                        aaCTTAAAGCGGCAGCGGTCAGAGAATGCGGCAACGTAGCAGAAAACAACAGCTTTGTTTTGGTAGGTAGAGTATTTGAAAAACGTAattgat                                                 <  1:8039939/93‑1 (MQ=255)

                                        aaCTTAAAGCGGCAGCGGTCAGAGAATGCGCCAACGTAGCAGAAAACAACAGCTTTGTTTTGGTAGGTAGAGTATTTGAAAAACGTAattgat                                                 >  1:10019931/1‑93 (MQ=255)

                                         aCTTAAAGGGCCACCGATCAGATAAACCGCAAACGTAGCAGAACACAACACCTTGGTTTGGGTAGGCAGAGTATTTGAAAAACCTAattgatt                                                <  1:2068099/93‑1 (MQ=255)

                                         aCTTAAAGCGGCAGCGGTCAGAGAATGCGCCAACGTAGCAGAAAACAACAGCTTTGTTTTGGTAGGTAGAGTATTTGAAAAACGTAattgatt                                                <  2:8048747/93‑1 (MQ=255)

                                           ttAAAGCGGCAGCGGTCAGAGAATGCGCCAACGTAGCAGAAAACAACAGCTTTGTTTTGGTAGGTAGAGTATTTGAAAAACGTAATTGATTGc                                              >  2:7360734/1‑93 (MQ=255)

                                           ttAAAGCGGCAGCGGTCAGAGAATGCGCCAACGTAGCAGAAAACAACAGCTTTGTTTTGGTAGGTAGAGTATTTGAAAAACGTAATTGATTGc                                              <  1:4862933/93‑1 (MQ=255)

                                           ttAAAGCGGCAGCGGTCAGAGAATGCGCCAACGTAGCAGAAAACAACAGCTTTGTTTTGGTAGGTAGAGTATTTGAAAAACGTAATTGATTGc                                              >  1:7341207/1‑93 (MQ=255)

                                            tAAAGCGGCAGCGGTCAGAGAATGCGCCAACGTAGCAGAAAACAACAGCTTTGTTTTGGTAGGTAGAGTATTTGAAAAACGTAATTGATTGCg                                             >  2:3331266/1‑93 (MQ=255)

                                               aGCGGCAGCGGTCAGAGAATGCGCCAACGTAGCAGAAAACAACAGCTTTGTTTTGGTAGGTAGAGTATTTGAAAAACGTAATTGATTGCGAAt                                          >  2:7901683/1‑93 (MQ=255)

                                                gCGGCAGCGGTCAGAGAATGCGCCAACGTAGCAGAAAACAACAGCTTTGTTTTGGTAGGTAGAGTATTTGAAAAACGTAATTGATTGCGAATa                                         >  2:4481978/1‑93 (MQ=255)

                                                  ggCAGCGGTCAGAGAATGCGCCAACGTAGCAGAAAACAACAGCTTTGTTTTGGTAGGTAGAGTATTTGAAAAACGTAATTGATTGCGAATAGc                                       <  1:3657564/93‑1 (MQ=255)

                                                   gCAGCGGTCAGAGAATGCGCCAACGTAGCAGAAAACAACAGCTTTGTTTTGGTAGGTAGAGTATTTGAAAAACGTACTTGATTGCGAATAGca                                      >  2:1479800/1‑93 (MQ=255)

                                                    cAGCGGTCAGAGAATGCGCCAACGTAGCAGAAAACAACAGCTTTGTTTTGGTAGGTAGAGTATTTGAAAAACGTAATTGATTTCGAATAGcaa                                     >  2:1142492/1‑93 (MQ=255)

                                                    cAGCGGTCAGAGAATGCGCCAACGTAGCAGAAAACAACAGCTTTGTTTTGGTAGGTAGAGTATTTGAAAAACGTAATTGATTGCGAATAGcaa                                     <  1:5829338/93‑1 (MQ=255)

                                                    cAGCGGTCAGAGAATGCGCCAACGTAGCAGAAAACAACAGCTTTGTTTTGGTAGGTAGAGTATTTGAAAAACGTAATTGATTGCGAATAGcaa                                     <  1:7648947/93‑1 (MQ=255)

                                                     aGCGGTCAGAGAATGCGCCAACGTAGCAGAAAACAACAGCTTTGTTTTGGTAGGTAGAGTATTTGAAAAACGTAATTGATTGCGAATAGcaac                                    >  1:5918697/1‑93 (MQ=255)

                                                      gCGGTCTGAGAATGCGCCAACGTAGCAGAAAACAACAGCTTTGTTTTGGTAGGTAGAGTATTTGAAAAACGTAATTGATTGCGAATAGcaaca                                   >  2:3716114/1‑93 (MQ=255)

                                                            agagAATGCGCCAACGTAGCAGAAAACAACAGCTTTGTTTTGGTAGGTAGAGTATTTGAAAAACGTAATTGATTGCGAATAGCAACAACTaaa                             >  2:3135984/1‑93 (MQ=255)

                                                              agaATGCGCCAACGTAGCAGAAAACAACAGCTTTGTTTTGGTAGGTAGAGTATTTGAAAAACGTAATTGATTGCGAATAGCAACAACTAaaca                           >  2:1351125/1‑93 (MQ=255)

                                                              agaATGCGCCAACGTAGCAGAAAACAACAGCTTTGTTTTGGTAGGTAGAGTATTTGAAAAACGTAATTGATTGCGAATAGCAACAACTAaaca                           <  2:2886905/93‑1 (MQ=255)

                                                               gaATGCGCCAACGTAGCAGAAAACAACAGCTTTGTTTTGGTAGGTAGAGTATTTGAAAAACGTAATTGATTGCGAATAGCAACAACTAaacaa                          >  2:3794938/1‑93 (MQ=255)

                                                                aaTGCGCCAACGTAGCAGAAAACAACAGCTTTGTTTTGGTAGGTAGAGTATTTGAAAAACGTAATTGATTGCGAATAGCAACAACTAaacaac                         >  2:5765332/1‑93 (MQ=255)

                                                                 aTGCGCCAACGTAGCAGAAAACAACAGCTTTGTTTTGGTAGGTATAGTATTTGAAAAACGTAATTGATTGCGAATAGCAACAACTAAACAAcc                        >  2:4360447/1‑93 (MQ=255)

                                                                 aTGCGCCAACGTAGCAGAAAACAACAGCTTTGTTTTGGTAGGTAGAGTATTTGAAAAACGTAATTGATTGCGAATAGCAACAACTAaacaaca                        >  2:7538088/1‑92 (MQ=255)

                                                                 aTGCGCCAACGTAGCAGAAAACAACAGCTTTGTTTTGGTAGGTAGAGTATTTGAAAAACGTAATTGATTGCGAATAGCAACAACTAAACAAcc                        >  1:4858143/1‑93 (MQ=255)

                                                                 aTGCGCCAACGTAGCAGAAAACAACAGCTTTGTTTTGGTAGGTAGAGTATTTGAAAAACGTAATTGATTGCGAATAGCAACAACTAAACAAcc                        <  1:5008762/93‑1 (MQ=255)

                                                                  tGCGCCAACGTAGCAGAAAACAACAGCTTTGTTTTGGTAGGTAGAGTATTTGAAAAACGTAATTGATTGCGAATAGCAACAACTAAACAACCa                       >  2:4776827/1‑93 (MQ=255)

                                                                   gcgaCAACGTAGCAGAAAACAACAGCTTGGTTTTGGTAGGTAGAGTATTTGAAAAACGTAATTGATTGCGAATAGCAACAACTAAACAACCaa                      <  1:4765036/93‑1 (MQ=255)

                                                                     gcCAACGTAGCAGAAAACAACAGCTTTGTTTTTGTAGGTAGAGTATTTGAAAAACGTAATTGATTGCGAATAGCAACAACTAAACAACCAATa                    >  2:2209411/1‑93 (MQ=255)

                                                                     gcCAACGTAGCAGAAAACAACAGCTTTGTTTTGGTAGGTAGTGTATTTGAAAAACGTAATTGATTGCGAATAGCAACAACTAAACAACCAATa                    <  1:9510476/93‑1 (MQ=255)

                                                                     gcCAACGTAGCAGAAAACAACAGCTTTGTTTTGGTAGGTAGAGTATTTGAAAAACGTAATTGATTGCGAATAGCAACAACTAAACAACCAATa                    >  2:6938806/1‑93 (MQ=255)

                                                                     gcCAACGTAGCAGAAAACAACAGCTTTGTTTTGGTAGGTAGAGTATTTGAAAAACGTAATTGATTGCGAATAGCAACAACTAAACAACCAATa                    <  2:9180233/93‑1 (MQ=255)

                                                                     gcCAACGTAGCAGAAAACAACAGCTTTGTTTTGGTAGGTAGAGTATTTGAAAAACGTAATTGATTGCGAATAGCAACAACTAAACAACCAATa                    >  2:7679284/1‑93 (MQ=255)

                                                                     gcCAACGTAGCAGAAAACAACAGCTTTGTTTTGGTAGGTAGAGTATTTGAAAAACGTAATTGATTGCGAATAGCAACAACTAAACAACCAATa                    <  2:9813481/93‑1 (MQ=255)

                                                                     gcCAACGTAGCAGAAAACAACAGCTTTGTTTTGGTAGGTAGAGTATTTGAAAAACGTAATTGATTGCGAATAGCAACAACTAAACAACCAATa                    <  2:4684862/93‑1 (MQ=255)

                                                                      ccAACGTAGCAGAAAACAACAGCTTTGTTTTGGTAGGTAGAGTATTTGAAAAACGTAATTGATTGCGAATAGCAACAACTAAACAACCAATac                   <  2:5605011/93‑1 (MQ=255)

                                                                      ccAACGTAGCAGAAAACAACAGCTTTGTTTTGGTAGGTAGAGTATTTGAAAAACGTAATTGATTGCGAATAGCAACAACTAAACAACCAATac                   <  2:4911080/93‑1 (MQ=255)

                                                                      ccAACGTAGCAGAAAACAACAGCTTTGTTTTGGTAGGTAGAGTATTTGAAAAACGTAATTGATTGCGAATAGCAACAACTAAACAACCAATac                   >  1:985135/1‑93 (MQ=255)

                                                                       cAACGTAGCAGAAAACAACAGCTTTGTTTTGGTAGGTAGAGTATTTGAAAAACGTAATTGATTGCGAATAGCAACAACTAAACAACCAATaca                  <  1:7801647/93‑1 (MQ=255)

                                                                       cAACGTAGCAGAAAACAACAGCTTNGTTTNGGTAGGTAGAGTATTTGAAAAACGTAATTGATTGCGAATAGCAACAACTAAACAACCAATaca                  <  2:5413856/93‑1 (MQ=255)

                                                                        aaCGTAGCAGAAAACAACAGCTTTGTTTTGGTAGGTAGAGTATTTGAAAAACGTAATTGATTGCGAATAGCAACAACTAAACAACCAATacac                 <  1:3378044/93‑1 (MQ=255)

                                                                         aCGTAGCAGAAAACAACAGCTTTGTTTTGGTAGGTAGAGTATTTGAAAAACGTAATTGATTGCGAATAGCAACAACTAAACAACCAATACAcc                >  2:502274/1‑93 (MQ=255)

                                                                         aCGTAGCAGAAAACAACAGCTTTGTTTTGGTAGGTAGAGTATTTGAAAAACGTAATTGATTGCGAATAGCAACAACTAAACAACCAATACAcc                <  1:6956563/93‑1 (MQ=255)

                                                                         aCGTAGCAGAAAACAACAGCTTTGTTTTGGTAGGTAGAGTATTTGAAAAACGTAATTGATTGCGAATAGCAACAACTAAACAACCAATACAcc                <  2:1692667/93‑1 (MQ=255)

                                                                         aCGTAGCAGAAAACAACAGCTTTGTTTTGGTAGGTAGAGTATTTGAAAAACGTAATTGATTGCGAATAGCAACAACTAAACAACCAATACAcc                <  1:9278346/93‑1 (MQ=255)

                                                                          cGTAGCAGAAAACAACAGCTTTGTTTTGGTAGGTAGAGTATTTGAAAAACGTAATTGATTGCGAATAGCAACAACTAAACAACCAATACAccc               <  1:157575/93‑1 (MQ=255)

                                                                          cGTAGCAGAAAACAACAGCTTTGTTTTGGTAGGTAGAGTATTTGAAAAACGTAATTGATTGCGAATAGCAACAACTAAACAACCAATACAccc               >  1:3070468/1‑93 (MQ=255)

                                                                            tAGCAGAAAACAACAGCTTTGTTTTGGTAGGTAGAGTATTTGAAAAACGTAATTGATTGCGAATAGCAACAACTAAACAACCAATACACCCgg             >  1:8298320/1‑93 (MQ=255)

                                                                            tAGCAGAAAACAACAGCTTTGTTTTGGTAGGTAGAGTATTTGAAAAACGTAATTGATTGCGAATAGCAACAACTAAACAACCAATACACCCgg             >  1:3739437/1‑93 (MQ=255)

                                                                             aGCAGAAAACAACAGCTTTGTTTTGGTAGGTAGAGTATTTGAAAAACGTAATTGATTGCGAATAGCAACAACTAAACAACCAATACACCCGGc            >  1:2476748/1‑93 (MQ=255)

                                                                              gCAGAAAACAACAGCTTTGTTTTGGTAGGTAGAGTATTTGAAAAACGTAATTGATTGCGAATAGCAACAACTAAACAACCAATACACCCGGcc           >  1:1034840/1‑93 (MQ=255)

                                                                              gCAGAAAACAACAGCTTTGTTTTGGTAGGTAGAGTATTTGAAAAACGTAATTGATTGCGAATAGCAACAACTAAACAACCAATACACCCGGcc           >  2:7159997/1‑93 (MQ=255)

                                                                              gCAGAAAACAACAGCTTTGTTTTGGTAGGTAGAGTATTTGAAAAACGTAATTGATTGCGAATAGCAACAACTAAACAACCAATACACCCGGcc           >  1:739934/1‑93 (MQ=255)

                                                                                 gAAAACAACAGCTTTGTTTTGGTAGGTAGAGTATTTGAAAAACGTAATTGATTGCGAATAGCAACAACTAAACAACCAATACACCCGGCCCCt        <  1:3920939/93‑1 (MQ=255)

                                                                                 gAAAACAACAGCTTTGTTTTGGTAGGTAGAGTATTTGAAAAACGTAATTGATTGCGAATAGCAACAACTAAACAACCAATACACCCGGCCCCt        >  2:5142850/1‑93 (MQ=255)

                                                                                 gAAAACAACAGCTTTGTTTTGGTAGGTAGAGTATTTGAAAAACGTAATTGATTGCGAATAGCAACAACTAAACAACCAATACACCCGGCCCCt        >  2:8479583/1‑93 (MQ=255)

                                                                                 gAAAACAACAGCTTTGTTTTGGTAGGTAGAGTATTTGAAAAACGTAATTGATTGCGAATAGCAACAACTAAACAACCAATACACCCGGCCCCt        >  1:6846469/1‑93 (MQ=255)

                                                                                  aaaaCAACAGCTTTGTTTTGGTAGGTAGAGTATTTGAAAAACGTAATTGATTGCGAATAGCAACAACTAAACAACCAATACACCCGGCCCCTc       >  1:1766684/1‑93 (MQ=255)

                                                                                   aaaCAACAGCTTTGTTTTGGTAGGTAGAGTATTTGAAAAACGTAATTGATTGCGAATAGCAACAACTAAACAACCAATACACCCGGCCCCTCg      >  2:6724326/1‑93 (MQ=255)

                                                                                    aacaacAGCTTTGTTTTGGTAGGTAGAGTATTTGAAAAACGTAATTGATTGCGAATAGCAACAACTAAACAACCAATACACCCGGCCCCTCGc     <  2:2111438/93‑1 (MQ=255)

ATCCTGGTAAAATACCATTTCAGCAATGAAACTGAGTTCAAACTTAAAGCGGCAGCGGTCAGAGAATGCGCCAACGTAGCAGAAAACAACGGCTTTGTTTTGGTAGGTAGAGTATTTGAAAAACGTAATTGATTGCGAATAGCAACAACTAAACAACCAATACACCCGGCCCCTCGCCGG  >  NC_000913/2562261‑2562440

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`