BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,590,989	T→C	intergenic (+7/+103)	b4537 → / ← ypfH	hypothetical protein/hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,590,989	0	T	C	100.0%	1057.3 / NA	326	intergenic (+7/+103)	b4537/ypfH	hypothetical protein/hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (187/139); total (187/139)

Only 100 of 345 total aligned reads displayed.

CCGGAGCTTCCCCCGCATCGTGATTTCAACGATAAGTGGGA‑CGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCA  >  NC_000913/2590899‑2591078

  ggAGCTTCCCCCGCATCGTGATTTCAACGATAAGTGGGA‑CGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTc                                                                                       <  1:986191/93‑1 (MQ=255)

  ggAGCTTCCCCCGCATCGTGATTTCAACGATAAGTGGGA‑CGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTc                                                                                       >  2:7491518/1‑93 (MQ=255)

  ggAGCTTCCCCCGCATCGTGATTTCAACGATAAGTGGGA‑CGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTc                                                                                       >  1:7891969/1‑93 (MQ=255)

   gAGCTTCCCCCGCATCGTGATTTCAACGATAAGTGGGA‑CGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCa                                                                                      <  1:9249070/93‑1 (MQ=255)

    aGCTTCCCCCGCATCGTGATTTCAACGATAAGTGGGA‑CGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCaa                                                                                     <  2:1700393/93‑1 (MQ=255)

     gCTTCCCCCGCATCGTGATTTCAACGATAAGTGGGA‑CGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAAc                                                                                    <  1:1554825/93‑1 (MQ=255)

     cctccccccGCATCGTTATCTAAAAGA‑AAGGGGGAGGGATGACGCCGACGGGCCAAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAAc                                                                                    <  1:5006809/89‑1 (MQ=255)

       ttCCCCCGCATCGTGATTTCAACGATAAGTGGGA‑CGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCg                                                                                  >  2:7649/1‑93 (MQ=255)

        tCCCCCGCATCGTGATTTCAACGATAAGTGGGA‑CGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGt                                                                                 <  1:1851594/93‑1 (MQ=255)

        tCCCCCGCATCGTGATTTCAACGATAAGTGGGA‑CGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGt                                                                                 >  1:5903647/1‑93 (MQ=255)

         cccccGCATCGTGATTTCAACGATAAGTGGGA‑CGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTa                                                                                >  2:5015523/1‑93 (MQ=255)

         cccccGCATCGTGATTTCAACGATAAGTGGGA‑CGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTa                                                                                <  1:577616/93‑1 (MQ=255)

         cccccGCATCGTGATTTCAACGATAAGTGGGA‑CGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTa                                                                                >  2:9506697/1‑93 (MQ=255)

         cccccGCATCGTGATTTCAACGATAAGTGGGA‑CGATGACGACGACTGGCCGAAAAAGGAATAACCGAAGACGTAAGCTGAGGGCTCAACCgaa                                                                                >  2:4182238/1‑91 (MQ=255)

          ccccGCATCGTGATTTCAACGATAAGTGGGA‑CGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAg                                                                               >  1:2619245/1‑93 (MQ=255)

          ccccGCATCGTGATTTCAACGATAAGTGGGA‑CGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAg                                                                               <  2:2852136/93‑1 (MQ=255)

           cccGCATCGTGATTTCAACGATAAGTGGGA‑CGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAgg                                                                              <  1:84822/93‑1 (MQ=255)

             cGCATCGTGATTTCAACGATAAGTGGGA‑CGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGcc                                                                            <  2:310688/93‑1 (MQ=255)

              gCATCGTGATTTCAACGATAAGTGGGA‑CGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCg                                                                           >  2:8469780/1‑93 (MQ=255)

              gCATCGTGATTTCAACGATAAGTGGGA‑CGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCg                                                                           <  2:490399/93‑1 (MQ=255)

              gCATCGTGATTTCAACGATAAGTGGGA‑CGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCg                                                                           <  1:5484349/93‑1 (MQ=255)

                aTCGTGATTTCAACGATAAGTGGGA‑CGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGAAAGCTGAGCGCTCAACCGTAGGCCGGa                                                                         >  1:3326201/1‑93 (MQ=255)

                 tCGTGATTTCAACGATAAGTGGGA‑CGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGaa                                                                        >  1:8663306/1‑92 (MQ=255)

                 tCGTGATTTCAACGATAAGTGGGA‑CGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGaa                                                                        >  2:6808320/1‑92 (MQ=255)

                 tCGTGATTTCAACGATAAGTGGGA‑CGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGAt                                                                        >  1:5651032/1‑93 (MQ=255)

                 tCGTGATTTCAACGATAAGTGGGA‑CGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGAt                                                                        >  2:5878791/1‑93 (MQ=255)

                  cGTGATTTCAACGATAAGTGGGA‑CGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATa                                                                       >  1:828249/1‑93 (MQ=255)

                  cGTGATTTCAACGATAAGTGGGA‑CGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATa                                                                       >  1:100207/1‑93 (MQ=255)

                   gTGATTTCAACGATAAGTGGGA‑CGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATaa                                                                      >  2:272052/1‑93 (MQ=255)

                   gTGATTTCAACGATAAGTGGGA‑CGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATaa                                                                      <  2:8768910/93‑1 (MQ=255)

                    tGATTTCAACGATAAGTGGGA‑CGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAg                                                                     >  1:7022337/1‑93 (MQ=255)

                      aTTTCAGCGATAAGTGGGA‑CGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGc                                                                   >  2:9762000/1‑93 (MQ=255)

                      aTTTCAACGATAAGTGGGA‑CGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGc                                                                   >  2:9201789/1‑93 (MQ=255)

                       tttCAACGATAAGTGGGA‑CGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCg                                                                  <  1:3153005/93‑1 (MQ=255)

                       tttCAACGATAAGTGGGA‑CGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCg                                                                  >  2:7916408/1‑93 (MQ=255)

                       tttCAACGATAAGTGGGA‑CGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCg                                                                  <  1:7477000/93‑1 (MQ=255)

                        ttCAACGATAAGTGGGA‑CGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGt                                                                 <  2:3312657/93‑1 (MQ=255)

                        tccAACGATAAGTGGGA‑CGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGt                                                                 <  2:2187667/91‑1 (MQ=255)

                          cAACGATAAGTGGGA‑CGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAATCGTAGGCCGGATAAGGCGTTa                                                               >  2:6415177/1‑93 (MQ=255)

                          cAACGATAAGTGGGA‑CGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTa                                                               >  2:2683075/1‑93 (MQ=255)

                           aaCGATAAGTGGGA‑CGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTaa                                                              <  1:4794677/93‑1 (MQ=255)

                           aaCGATAAGTGGGA‑CGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTaa                                                              <  1:1783173/93‑1 (MQ=255)

                           aaCGATAAGTGGGA‑CGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTaa                                                              <  2:3701523/93‑1 (MQ=255)

                             cGATAAGTCGGA‑CTATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAAcg                                                            <  1:4678697/93‑1 (MQ=255)

                              gATAAGTGGGA‑CGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAAcgc                                                           <  2:3860431/93‑1 (MQ=255)

                              gATAAGTGGGA‑CGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAAcgc                                                           <  2:6864202/93‑1 (MQ=255)

                              gATAAGGGGGA‑CGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAAcgc                                                           <  2:9641065/93‑1 (MQ=255)

                               aTAAGTGGGA‑CGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAAcgcc                                                          >  1:6254323/1‑93 (MQ=255)

                                           gATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCaa                                               <  2:938024/93‑1 (MQ=255)

                                            aggacgacgacTGGCAGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAAt                                              <  2:3826562/91‑1 (MQ=255)

                                            aTGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAAt                                              >  2:4502866/1‑93 (MQ=255)

                                            aTGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAAt                                              >  2:2049022/1‑93 (MQ=255)

                                             tGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATg                                             <  2:5077392/93‑1 (MQ=255)

                                              gacgacgacTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATgg                                            >  2:2355457/1‑93 (MQ=255)

                                               acgacgacTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGt                                           >  2:809801/1‑93 (MQ=255)

                                                cgacgacTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTg                                          <  1:111866/93‑1 (MQ=255)

                                                cgacgacTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTg                                          >  1:2566723/1‑93 (MQ=255)

                                                  acgacTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGaa                                        >  1:5232687/1‑93 (MQ=255)

                                                  acgacTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGaa                                        <  2:7975047/93‑1 (MQ=255)

                                                  acgacTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGaa                                        >  1:9082771/1‑93 (MQ=255)

                                                   cgacTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAAc                                       <  1:377250/93‑1 (MQ=255)

                                                       tGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATg                                   >  1:3857672/1‑93 (MQ=255)

                                                        ggCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGc                                  >  2:7086447/1‑93 (MQ=255)

                                                        ggCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGc                                  >  2:7322233/1‑93 (MQ=255)

                                                          ccGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCt                                <  2:3144212/93‑1 (MQ=255)

                                                           cGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTg                               <  1:1937745/93‑1 (MQ=255)

                                                             aaaaaGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGAt                             <  1:5328366/93‑1 (MQ=255)

                                                             aaaaaGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGAt                             >  1:3452294/1‑93 (MQ=255)

                                                              aaaaGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATg                            >  1:3917855/1‑93 (MQ=255)

                                                              aaaaGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATg                            <  1:1254511/93‑1 (MQ=255)

                                                               aaaGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCtgctgc                           >  1:9505490/1‑93 (MQ=255)

                                                                aaGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCg                          >  2:6497457/1‑93 (MQ=255)

                                                                aaGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCg                          >  2:1368641/1‑93 (MQ=255)

                                                                 aGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGa                         >  1:2090298/1‑93 (MQ=255)

                                                                 aGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGa                         <  1:7959719/93‑1 (MQ=255)

                                                                 aGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGa                         <  2:6516206/93‑1 (MQ=255)

                                                                  ggATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGAc                        >  1:7277906/1‑93 (MQ=255)

                                                                   gATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACg                       <  2:5277711/93‑1 (MQ=255)

                                                                   gATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACg                       >  2:3002704/1‑93 (MQ=255)

                                                                    aTCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGc                      >  2:4652175/1‑93 (MQ=255)

                                                                     tCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCt                     >  2:1011523/1‑93 (MQ=255)

                                                                     tCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCt                     >  2:4069213/1‑93 (MQ=255)

                                                                      cAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTc                    >  2:6196713/1‑93 (MQ=255)

                                                                       aaCCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCa                   >  2:8872232/1‑93 (MQ=255)

                                                                       aaCCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCa                   <  1:9419103/93‑1 (MQ=255)

                                                                         ccGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCAcg                 <  2:1149597/93‑1 (MQ=255)

                                                                            aagaagTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCTACGCTCACGCGt              >  2:5737874/1‑93 (MQ=255)

                                                                              gaagTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCt            >  1:9027217/1‑93 (MQ=255)

                                                                              gaagTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGAGTCAACGCCGCATACGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCt            <  1:6492987/93‑1 (MQ=25)

                                                                              gaagTAAGCGGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCt            <  2:1887178/93‑1 (MQ=255)

                                                                                agTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTa          >  1:2935766/1‑93 (MQ=255)

                                                                                agTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTa          <  1:1659850/93‑1 (MQ=255)

                                                                                agTAAGCTGAGCGCTCAACCGGAGGCCGTATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTa          <  1:4922193/93‑1 (MQ=255)

                                                                                  tAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATc        >  1:5077889/1‑93 (MQ=255)

                                                                                  tAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATc        <  1:6738205/93‑1 (MQ=255)

                                                                                   aaGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCa       <  2:6584228/93‑1 (MQ=255)

                                                                                     gCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAgg     <  1:425909/93‑1 (MQ=255)

                                                                                     gCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAgg     >  1:2256167/1‑93 (MQ=255)

                                                                                        gAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCa  <  2:5411133/93‑1 (MQ=255)

                                                                                        gAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCa  >  1:4491356/1‑93 (MQ=255)

CCGGAGCTTCCCCCGCATCGTGATTTCAACGATAAGTGGGA‑CGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCA  >  NC_000913/2590899‑2591078

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`