Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,603,370 T→C Y180Y (TAT→TAC hyfD → hydrogenase 4 membrane subunit

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,603,3700TC95.7% 730.7 / 11.6 258Y180Y (TAT→TAChyfDhydrogenase 4 membrane subunit
Reads supporting (aligned to +/- strand):  ref base T (4/7);  new base C (93/154);  total (97/161)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.52e-01

Only 100 of 329 total aligned reads displayed.

GGCGTTGATCAGTTATTACCAGAGCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTATCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGTTACACGGCGACGCACGTTATCTGGTTTATGG  >  NC_000913/2603280‑2603462
                                                                                          |                                                                                            
ggCGTTGATCAGTTATTACCAGAGCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTACCt                                                                                            <  2:5241879/93‑1 (MQ=255)
ggCGTTGATCAGTTATTACCAGAGCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGGTGTACCt                                                                                            >  1:3135242/1‑93 (MQ=255)
   gTTGATCAGTTATTACCAGAGCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGGTGTACCTTgc                                                                                         >  1:3461152/1‑93 (MQ=255)
     tGATCAGTTATTACCAGAGCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGGTGTTCCTTtccg                                                                                       >  1:634097/1‑93 (MQ=255)
      gATCAGTTATTACCAGAGCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTACCTTgccgc                                                                                      <  1:6536604/93‑1 (MQ=255)
        tCAGTTATTACCAGAGCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGGTGTACCTTgccgccg                                                                                    >  1:3783854/1‑93 (MQ=255)
           gTTATTACCAGAGCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTACCTTtccgccgccc                                                                                 >  1:2394149/1‑92 (MQ=255)
           gTTATTACCAGAGCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTACCTTtcccccgccc                                                                                 >  2:9773845/1‑92 (MQ=255)
           gTTATTACCAGAGCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCCTTGGGGTTGTTCCTTgacgcccccc                                                                                 >  1:4518210/1‑92 (MQ=255)
             tattaCCAGAGCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGCTGGGGGTGTACCTTGCCGCCGCCAcc                                                                               >  1:612638/1‑92 (MQ=255)
              attaCCAGAGCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTTGGGTTGTACCTTTCCcccgccccgc                                                                              >  1:5845494/1‑93 (MQ=255)
              attaCCAGAGCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGc                                                                              >  1:1361818/1‑93 (MQ=255)
              attaCCAGAGCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGCTTGGGTTGTTCCTTGCCGCCGCCCCGc                                                                              >  2:9002287/1‑93 (MQ=255)
                  ccAGAGCGATAAGGCGCATCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGtt                                                                          <  2:6553195/93‑1 (MQ=255)
                  ccAGAGCAATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGtt                                                                          <  2:4489686/93‑1 (MQ=255)
                    agagCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTACCTTGGCGCCGCCACGCTGtttt                                                                        >  2:6025238/1‑93 (MQ=255)
                    agagCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGtttt                                                                        <  2:3994544/93‑1 (MQ=255)
                    agagCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTACCTTGCCGCCCCCCCGCTGtttt                                                                        >  2:2689657/1‑93 (MQ=255)
                      agCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGGTGTACCTTGCCGCCGCCACGCTGTTTTTg                                                                      >  1:5163625/1‑93 (MQ=255)
                       gCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGGTGTACCTTGCCGCCGCCCCGCTGTTTTTGc                                                                     >  2:2539636/1‑93 (MQ=255)
                        cGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCa                                                                    <  2:2463268/93‑1 (MQ=255)
                        cGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCa                                                                    <  1:5025587/93‑1 (MQ=255)
                        cGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCCGTTTTTGCa                                                                    >  2:8209493/1‑93 (MQ=255)
                        cGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGCTTGGGGTGTATCTTGTCGCCGCCACGCTGttttttcg                                                                    >  2:3712304/1‑90 (MQ=255)
                         gATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAg                                                                   <  2:7545361/93‑1 (MQ=255)
                         gATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGGTGTACCTTGCCGCCCCCCCGCCGTTTTTGCaa                                                                   >  2:3855667/1‑92 (MQ=255)
                          aTAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTATCTTGCCGCCGCCACGCTGTTTTTGCAGa                                                                  >  2:8710777/1‑93 (MQ=255)
                              aGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTACCCTGCCGCCGCCACGCCGTTTTTGCAGACCgg                                                              >  2:5794222/1‑93 (MQ=255)
                              aGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGGTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGGCCgg                                                              >  2:7842408/1‑93 (MQ=255)
                               gcgcAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGa                                                             <  1:959874/93‑1 (MQ=255)
                                cgcAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGaa                                                            <  2:9514729/93‑1 (MQ=255)
                                 gcAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAAc                                                           <  1:623091/93‑1 (MQ=255)
                                    gCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGtt                                                        <  2:6833961/93‑1 (MQ=255)
                                      gTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGGTGTATCTTGTCGCCGCCACGCTGTTTTTGCCGACCGGGACGTTTg                                                      >  2:6967302/1‑93 (MQ=255)
                                       ttCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTgc                                                     <  1:1203673/93‑1 (MQ=255)
                                       ttCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTgc                                                     >  1:9949475/1‑93 (MQ=255)
                                       ttCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGGTGGACCTTGCCGCCCCCACGCTGTTTTTGCAGACCGGAACGTTTgg                                                     >  2:7939547/1‑92 (MQ=255)
                                          aGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGATGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCt                                                  <  2:1698901/93‑1 (MQ=255)
                                           gCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGGACGTTTGCGCtt                                                 >  1:8125694/1‑93 (MQ=255)
                                           gCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCtt                                                 <  1:3960957/93‑1 (MQ=255)
                                            cACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCCCGCTGTTTTTGCCGACCGGAACGTTTGCGCTTa                                                >  2:6664721/1‑93 (MQ=255)
                                             aCTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCCCGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAg                                               >  1:4212159/1‑93 (MQ=255)
                                             aCTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAg                                               <  2:8523182/93‑1 (MQ=255)
                                              cTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAgc                                              <  2:1107683/93‑1 (MQ=255)
                                              cTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGGTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAgc                                              >  2:294909/1‑93 (MQ=255)
                                              cTAAAAGCGTTACTTATCACTCATATCGGCTCCCTGGGGTTGTACCTTGGCGCCGCCACGCTGTTTTTGCAAACCCGAACGTTTGCGCTTAgc                                              >  1:8711281/1‑93 (MQ=255)
                                               tAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTACCTTTCCGCCGCCCCGCTGTGTTTGTAGACCGGGACTTTTGCGCTTAgcg                                             >  1:8989785/1‑93 (MQ=255)
                                               tAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTTCGCGTAgcg                                             >  1:2365435/1‑93 (MQ=255)
                                               tAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGGTGGACCTTTGCGCCGCCACGCTGTTTTTGCAGAACGGAACGGTTGCGGTTAgcg                                             >  2:1564460/1‑93 (MQ=255)
                                                aaaaGCGTTACTTATCACTCATATCGGCTCGTTGGGGGTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAgcgc                                            >  2:9906159/1‑93 (MQ=255)
                                                 aaaGCGTTACTTATCACTCATATCGGCTCGTTGGGGGTGTACCTTGCCGCCGCCACGCCGTTTTTGCAGACCGGAACGGTTGCGCTTAGcgcg                                           >  2:5066527/1‑93 (MQ=255)
                                                  aaGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGa                                          <  2:6414662/93‑1 (MQ=255)
                                                  aaGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGa                                          <  1:1522323/93‑1 (MQ=255)
                                                   aGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGAt                                         <  1:5416221/93‑1 (MQ=255)
                                                    gCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTTCCTTTCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGATTAGCGCGATg                                        >  2:6305663/1‑93 (MQ=255)
                                                    gCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATg                                        <  1:7952508/93‑1 (MQ=255)
                                                     cGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTACCTGGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTGGCGCTTAGCGCGATGa                                       <  2:4883120/93‑1 (MQ=255)
                                                      gTTACTTATCACTCATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAg                                      <  2:2320694/93‑1 (MQ=255)
                                                       ttACTTATCACTCATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGtt                                                        >  1:8855998/1‑74 (MQ=255)
                                                       ttACTTATCACTCATATCGGCTCGTTGGGGGTGTACCTTTCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGGTGAGc                                     >  1:304758/1‑93 (MQ=255)
                                                       ttACTTATCACTCATATCGGCTCGTTGGGGGTGTACCTTGCCGCCGCCACGCTGTTTTTTCAGACCGGAACGTTTGCGCTTAGCGCGATGAGc                                     >  1:1878224/1‑93 (MQ=255)
                                                        tACTTATCACTCATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCg                                    >  1:8641443/1‑93 (MQ=255)
                                                        tACTTATCACTCATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCg                                    <  1:9073159/93‑1 (MQ=255)
                                                           ttATCACTCATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGCACGTTTGCGCTTAGCGTGATGAGCgtgt                                 >  2:8238806/1‑93 (MQ=255)
                                                           ttATCACTCATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGGTGAGCGAGt                                 >  2:4809611/1‑93 (MQ=255)
                                                            tATCACTCATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGGACGTTTGCGCTTAGCGCGATGAGCGAggt                                >  2:2133456/1‑91 (MQ=255)
                                                            tATCACTCATATCGGCTCGTTGGGGGTGTACCTTGCCGCCGCCACGCTGTTTTTTCAGACCGGGACGCTTGCGCTTTGCCCGATGAGCGAGtt                                >  2:1825738/1‑93 (MQ=255)
                                                             aTCACTCATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGTTa                               >  2:2064172/1‑93 (MQ=255)
                                                             aTCACTCATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGTTa                               <  2:3589445/93‑1 (MQ=255)
                                                              tCACTCATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGTTac                              >  1:1430769/1‑93 (MQ=255)
                                                                ccTCATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGTTacac                            <  1:7681700/92‑1 (MQ=255)
                                                                aCTCATATCGGCTCGTTGGGGTTGTCCCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGTTacac                            <  2:4621844/93‑1 (MQ=255)
                                                                 cTCATATCGGCTCGTTGGGGCTGTACCTTGCCGGCGCCACGGTGGTTTTGCAGACCGGGACGCTTGCGGCTAGCGCGGTGAGCGGGGTACACg                           >  2:1644522/1‑93 (MQ=255)
                                                                   cATATCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGTTACACAGc                         >  2:4988252/1‑93 (MQ=255)
                                                                    atatCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGTTACACGGCg                        <  1:2058609/93‑1 (MQ=255)
                                                                     tatCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGTTACACGGCGa                       <  1:7477599/93‑1 (MQ=255)
                                                                     tatCGGCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGTTACACGGCGa                       <  1:2461852/93‑1 (MQ=255)
                                                                     catCGGCACGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGGTACACGGCGa                       >  2:6166921/2‑93 (MQ=255)
                                                                       tCGGCTCGTTGGGGTTGTATCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGTTACACGGCGACg                     <  1:5861510/93‑1 (MQ=255)
                                                                         ggCTCGTTGGGGTTGTGCCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGTTACACGGCGACGCa                   <  1:8417561/93‑1 (MQ=255)
                                                                         ggCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGTTACACGGCGACGCa                   <  2:1407583/93‑1 (MQ=255)
                                                                         ggCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGTTACACGGCGACGCa                   >  1:7126022/1‑93 (MQ=255)
                                                                         ggCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGTTACACGGCGACGCa                   <  1:4687721/93‑1 (MQ=255)
                                                                          gCTCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGTTACACGGCGACGCAc                  >  2:7276432/1‑93 (MQ=255)
                                                                            tCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGTTACACGGCGACGCACGt                <  2:550585/93‑1 (MQ=255)
                                                                            tCGTTGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGTTACACGGCGACGCACGt                <  1:2788627/93‑1 (MQ=255)
                                                                              gTTGGGGTTGTATCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGTTACACGGCGACGCACGTTa              <  1:5929081/93‑1 (MQ=255)
                                                                               ttGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGTTACACGGCGACGCACGTTAt             >  1:9507726/1‑93 (MQ=255)
                                                                                tGGGGTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGTTACACGGCGACGCACGTTATc            <  1:1999933/93‑1 (MQ=255)
                                                                                 ggggTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGTTACACGGCGACGCACGTTATCt           <  1:9366849/93‑1 (MQ=255)
                                                                                   ggTTGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGTTACACGGCGACGCACGTTATCTgg         <  1:4585407/93‑1 (MQ=255)
                                                                                     ttGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGTTACACGGCGCCGCACGTTATCTGGtt       >  1:2269646/1‑93 (MQ=255)
                                                                                      tGTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGTTACACGGCGACGCACGTTATCTGGttt      <  2:8083307/93‑1 (MQ=255)
                                                                                       gTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGTTACACGGCGACGCACGTTATCTGGTTTa     <  2:7003694/93‑1 (MQ=255)
                                                                                       gTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGTTACACGGCGACGCACGTTATCTGGTTTa     >  1:7296287/1‑93 (MQ=255)
                                                                                       gTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGTTACACGGCGACGCACGTTATCTGGTTTa     <  1:6810924/93‑1 (MQ=255)
                                                                                       gTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGTTACACGGCGACGCACGTTATCTGGTTTa     <  2:9278229/93‑1 (MQ=255)
                                                                                       gTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGTTACACGGCGACGCACGTTATCTGGTTTa     <  1:9199373/93‑1 (MQ=255)
                                                                                       gTACCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGCTACACGGCGACGCACGTTATCTGGTTTa     >  2:4244608/1‑93 (MQ=255)
                                                                                          tCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGTTACACGGCGACGCACGTTATCTGGTTTATgg  <  1:3601370/93‑1 (MQ=255)
                                                                                          |                                                                                            
GGCGTTGATCAGTTATTACCAGAGCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTATCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGTTACACGGCGACGCACGTTATCTGGTTTATGG  >  NC_000913/2603280‑2603462

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: