Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,675,068 T→C E438E (GAA→GAG yphE ← putative ATP‑binding component of a transport system

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,675,0680TC99.6% 803.6 / ‑5.9 250E438E (GAA→GAGyphEputative ATP‑binding component of a transport system
Reads supporting (aligned to +/- strand):  ref base T (1/0);  new base C (107/142);  total (108/142)
Fisher's exact test for biased strand distribution p-value = 4.32e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.95e-01

Only 100 of 261 total aligned reads displayed.

CGGCAACTCCTCCACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCTTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATCACCACTTTTTGCTGATT  >  NC_000913/2674978‑2675157
                                                                                          |                                                                                         
cGGCAACCCCTCCACTACACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTc                                                                                         <  2:2722837/93‑1 (MQ=255)
 ggCAACTCCTCCACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCg                                                                                        <  1:1073947/93‑1 (MQ=255)
   cAACTCCTCCGCTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGat                                                                                      <  2:1482886/93‑1 (MQ=255)
   cAACTCCTCCACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGat                                                                                      >  2:8898105/1‑93 (MQ=255)
    caCTCCTCCACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGata                                                                                     <  2:3966947/92‑1 (MQ=255)
    aaCTCCTCCACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACACTACGGTAAATCTTCTGTTTGGCTTCGaca                                                                                     >  1:3589721/1‑91 (MQ=255)
    aaCTCCTCCACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGata                                                                                     <  1:5515710/93‑1 (MQ=255)
    aaCTCCTCCACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGata                                                                                     >  1:1669406/1‑93 (MQ=255)
     aCTCCTCCTCTTCACTAGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGatat                                                                                    <  2:701446/93‑1 (MQ=255)
     aCTCCTCCACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGatat                                                                                    >  1:3357899/1‑93 (MQ=255)
     aCTCCTCCACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGatat                                                                                    >  2:9147060/1‑93 (MQ=255)
      ctcctcCACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATc                                                                                   <  1:8529928/93‑1 (MQ=255)
       tcctccACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCg                                                                                  >  1:4238320/1‑93 (MQ=255)
        cctccACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGa                                                                                 >  2:7988010/1‑93 (MQ=255)
        cctccACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGa                                                                                 <  2:5629052/93‑1 (MQ=255)
        cctccACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGa                                                                                 <  1:160632/93‑1 (MQ=255)
          tccACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGAcg                                                                               >  2:8112205/1‑93 (MQ=255)
          tccACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGAcg                                                                               <  2:8376351/93‑1 (MQ=255)
            cACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGAcgcc                                                                             <  2:7574395/93‑1 (MQ=255)
            cACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGAcgcc                                                                             <  1:8098056/93‑1 (MQ=255)
             ccTTCACTGGAGATAACCACCTCGTTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGAcgccg                                                                            <  1:1870129/92‑1 (MQ=255)
              cTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGAcgccgc                                                                           >  2:9641330/1‑93 (MQ=255)
               ttCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCcgcg                                                                          <  1:4043851/93‑1 (MQ=255)
               ttCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCcgcg                                                                          <  2:8328393/93‑1 (MQ=255)
                tCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCcgcgc                                                                         >  1:3932016/1‑93 (MQ=255)
                 cACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCcgcgcg                                                                        <  2:8841371/93‑1 (MQ=255)
                  agtGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGt                                                                       <  2:479473/91‑1 (MQ=255)
                   cTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGtt                                                                      <  2:4644669/93‑1 (MQ=255)
                   cTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGtt                                                                      <  1:7611999/93‑1 (MQ=255)
                    tGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTg                                                                     >  2:3567175/1‑93 (MQ=255)
                        gaaaaaCACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCtc                                                                 <  2:8246892/90‑1 (MQ=255)
                        gaTAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCtc                                                                 <  1:2135405/93‑1 (MQ=255)
                        gaTAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCtc                                                                 <  1:7691670/93‑1 (MQ=255)
                         aTAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCtcg                                                                <  1:539726/93‑1 (MQ=255)
                          tAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCtcgt                                                               >  1:6101325/1‑93 (MQ=255)
                          tAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCtcgt                                                               >  1:8384994/1‑93 (MQ=255)
                          tAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCtcgc                                                               >  1:1473126/1‑92 (MQ=255)
                          tAAACACCACGCTTTTTCCTTCGGCACCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGACGCCCGTTGCCtcgt                                                               >  1:26637/1‑93 (MQ=255)
                          aaaaCACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCtcgt                                                               <  2:2145922/92‑1 (MQ=255)
                           aaaCACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCtcgtc                                                              <  1:3995865/93‑1 (MQ=255)
                           aaaCACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCtcgtc                                                              >  1:2988276/1‑93 (MQ=255)
                           aaaCACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCtcgtc                                                              >  1:5617580/1‑93 (MQ=255)
                            aaCACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCtcgtcg                                                             >  2:2980718/1‑93 (MQ=255)
                            aaCACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCCCGCGTTGGCtcgtcg                                                             >  1:3520735/1‑93 (MQ=255)
                               accacGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGc                                                          <  2:6560266/93‑1 (MQ=255)
                               accacGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGc                                                          >  2:190170/1‑93 (MQ=255)
                                ccacGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGca                                                         >  2:2412567/1‑93 (MQ=255)
                                 cacGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGcaa                                                        >  2:5847780/1‑93 (MQ=255)
                                    gCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGcaacaa                                                     >  1:1827205/1‑93 (MQ=255)
                                    gCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGcaacaa                                                     <  2:4862910/93‑1 (MQ=255)
                                     cTTTTTCCTTCGGCAGCAAGCTCACGGACAATACGGTAAATCTGCTGTTTGGACTCGATATCGACGCCGCGCGTTGGCTCGTAGAGCAACaaa                                                    >  2:6020662/1‑93 (MQ=255)
                                        tttCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATc                                                 <  1:5859620/93‑1 (MQ=255)
                                        tttCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATc                                                 <  2:8306716/93‑1 (MQ=255)
                                        tttCCTTCGGAAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATc                                                 <  2:1423049/93‑1 (MQ=255)
                                          tCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATctg                                               <  1:3814669/93‑1 (MQ=255)
                                            cTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATctggc                                             <  2:516402/93‑1 (MQ=255)
                                             ttCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATctggct                                            >  1:7330346/1‑93 (MQ=255)
                                              tCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATctggctg                                           >  2:3869925/1‑93 (MQ=255)
                                              tCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATctggctg                                           <  1:6515408/93‑1 (MQ=255)
                                                 gCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGgca                                        <  2:3008104/93‑1 (MQ=255)
                                                  cagccagcACACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGgcag                                       <  1:8864651/93‑1 (MQ=255)
                                                   agccagcTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGgcagc                                      <  2:338499/93‑1 (MQ=255)
                                                    gccagcTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGgcagca                                     >  2:4667039/1‑93 (MQ=255)
                                                    gccagcTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGgcagca                                     <  1:6342201/93‑1 (MQ=255)
                                                    gccagcTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGgcagca                                     >  2:3144184/1‑93 (MQ=255)
                                                      cagcTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATa                                   >  1:4338305/1‑93 (MQ=255)
                                                      cagcGCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATa                                   <  2:1726141/93‑1 (MQ=255)
                                                      cagcGCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATa                                   <  1:7888215/93‑1 (MQ=255)
                                                       agcTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAg                                  >  1:4542671/1‑93 (MQ=255)
                                                       agcTCACGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAg                                  >  2:7097625/1‑93 (MQ=255)
                                                            aCGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCa                             >  1:7164903/1‑93 (MQ=255)
                                                             cGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCaa                            <  2:8506988/93‑1 (MQ=255)
                                                             cGGACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCaa                            <  2:5404045/93‑1 (MQ=255)
                                                              ggACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAAc                           <  2:244104/93‑1 (MQ=255)
                                                              ggACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAAc                           <  1:494933/93‑1 (MQ=255)
                                                               gACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACg                          >  2:4548444/1‑93 (MQ=255)
                                                               gACAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACg                          >  1:5215156/1‑93 (MQ=255)
                                                                 cAATACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGAc                        >  1:7082175/1‑93 (MQ=255)
                                                                   aTACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCg                      <  2:4219117/93‑1 (MQ=255)
                                                                   aTACGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCg                      >  1:1012894/1‑93 (MQ=255)
                                                                     aCGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGAt                    <  2:3456197/93‑1 (MQ=255)
                                                                     aCGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGAt                    >  2:8421646/1‑93 (MQ=255)
                                                                      cGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATc                   <  2:9542868/93‑1 (MQ=255)
                                                                      cGGTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATc                   >  2:636405/1‑93 (MQ=255)
                                                                        gTAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATcac                 >  1:4772932/1‑93 (MQ=255)
                                                                         tAAATCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATcacc                <  1:9211481/93‑1 (MQ=255)
                                                                          aaaTCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATcacca               <  2:1203113/93‑1 (MQ=255)
                                                                           aaTCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATcaccac              >  1:7961134/1‑93 (MQ=255)
                                                                            aTCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATCACCACt             <  1:2285168/93‑1 (MQ=255)
                                                                            aTCTGCTGTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATCACCACt             <  1:6384037/93‑1 (MQ=255)
                                                                               tgctgTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATCACCGCtttt          <  2:1385521/93‑1 (MQ=255)
                                                                               tgctgTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATCACCACtttt          <  2:9532694/93‑1 (MQ=255)
                                                                               tgctgTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATCACCACtttt          <  1:241255/93‑1 (MQ=255)
                                                                                  tgTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATCACCACTTTTTGc       >  1:1152988/1‑93 (MQ=255)
                                                                                   gTTTGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATCACCACTTTTTGCt      <  1:8729556/93‑1 (MQ=255)
                                                                                    tttGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCCTCGACCCAACGACCGCTCACCACTTTTTGCTg     >  1:6483282/1‑93 (MQ=255)
                                                                                     ttGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATCACCACTTTTTGCTGa    <  1:1275730/93‑1 (MQ=255)
                                                                                      tGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATCACCACTTTTTGCTGAt   <  1:2045036/93‑1 (MQ=255)
                                                                                      tGGCCTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATCACCACTTTTTGCTGAt   <  1:692294/93‑1 (MQ=255)
                                                                                       ggCCTCGCTATCGCCGCCGCGCGTTGGCTCGTCGCGCCCCCACCTCTGGCTGGCCGCCTCGCCCCCACGCCCGTTCGCCCCTTTTTGCTGCtt  <  2:7704245/93‑1 (MQ=255)
                                                                                          |                                                                                         
CGGCAACTCCTCCACTTCACTGGAGATAAACACCACGCTTTTTCCTTCGGCAGCCAGCTCACGGACAATACGGTAAATCTGCTGTTTGGCTTCGATATCGACGCCGCGCGTTGGCTCGTCGAGCAACAAAATCTGGCTGGCAGCATAGACCCAACGACCGATCACCACTTTTTGCTGATT  >  NC_000913/2674978‑2675157

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: