BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	328,027	T→C	T184A (ACC→GCC)	betI ←	putative transcriptional repressor of bet genes

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	328,027	0	T	C	100.0%	378.7 / NA	121	T184A (ACC→GCC)	betI	putative transcriptional repressor of bet genes
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (32/89); total (32/89)

Only 100 of 202 total aligned reads displayed.

CTGTTCTGCCATTCGGGACATCACGTCTCCTCGGTTAATCGGTGGGTAGATGCTGAGTGATAAAGTGGC‑GGGTCAGGGAATTAGCGCGGGTTTTATCCAGCGGTTTGCCGCTCAGAGCCGCGCGCAGCCATAATCCATCAATCAGCGCGGCCAGGCCGTAGCCCGCTTCCTGTGCCTGTTCG  >  NC_000913/327937‑328118

 tgTTCTGCCATTCGGGACATCACGTCTCCTCGGTTAATCGGTGGGTAGATGCTGAGTGATAAAGTGGC‑GGGGCAGGGGATTAGCGCGGGcttt                                                                                          >  2:5285492/1‑93 (MQ=255)

  gTTCTGCCATTCGGGACATCACGTCTCCTCGGTTAATCGGTGGGTAGATGCTGAGTGATAAAGTGGC‑GGGGCCGGGAAATAGCGCGGGctttt                                                                                         >  2:1239643/1‑92 (MQ=255)

   ttCTGCCATTCGGGACATCACGTCTCCTCGGTTAATCGGTGGGTAGATGCTGAGTGATAAAGTGGC‑GGGTCAGGGGAATAGCGCGGGGTTTAt                                                                                        >  1:1460844/1‑93 (MQ=255)

    tCTGCCATTCGGGACATCACGTCTCCTCGGTTAATCGGTGGGTAGATGCTGAGTGATAAAGTGGC‑GGGTCAGGGAATTAGCGCGGGCTTTATc                                                                                       <  1:6259645/93‑1 (MQ=255)

     cTGCCATTCGGGACATCACGTCTCCTCGGTTAATCGGTGGGTAGATGCTGAGTGATAAAGTGGC‑GGGTCAGGGAATTAGCGCGGGCTTTATcc                                                                                      <  2:8029469/93‑1 (MQ=255)

       gCCATTCGGGACATCACGTCTCCTCGGTTAATCGGTGGGTAGATGCTGAGTGATAAAGTGGC‑GGGTCAGGGAATTAGCGCGGGCTTTATCCAg                                                                                    <  1:6551549/93‑1 (MQ=255)

       gCCATTCGGGACATCACGTCTCCTCGGTTAATCGGTGGGTAGATGCTGAGTGATAAAGTGGC‑GGGGCAGGGAAATAGCGCGGGCTTTATTCac                                                                                    >  1:7838301/1‑92 (MQ=255)

          aTTCGGGACATCACGTCTCCTCGGTTAATCGGTGGGTAGATGCTGAGTGATAAAGTGGC‑GGGGCAGGGGAATAACGCGGGCGTTATTCAGCgg                                                                                 >  1:4470124/1‑93 (MQ=255)

           ttCGGGACATCACGTCTCCTCGGTTAATCGGTGGGTAGATGCTGAGTGATAAAGTGGC‑GGGTCAGGGAATTAGCGCGGGCTTTATCCAGCGGt                                                                                <  2:75748/93‑1 (MQ=255)

            tCGGGACATCACGTCTCCTCGGTTAATCGGTGGGTAGATGCTGAGTGATAAAGTGGC‑GGGTCAGGGAATTAGCGCGGGCTTTATCCAGCGGtt                                                                               <  1:8264823/93‑1 (MQ=255)

             cGGGACATCATGTGTCCTCGGTTAATCGGTGGGTAGATGCTGAGTGATAAAGTGGC‑GGGTCAGGGAATTAGCGCGGGCTTTATCCAGCGGttt                                                                              <  1:6945007/93‑1 (MQ=255)

             cGGGACATCACGTCTCCTCGGTTAATCGGTGGGTAGATGCTGAGTGATAAAGTGGC‑GGGGCAGGGGAATAGGGCGGGCTTTTTTCACCGGgtt                                                                              >  2:9717164/1‑93 (MQ=255)

              gggACATCACGTCTCCTCGGTTAATCGGTGGGTAGATGCTGAGTGATAAAGTGGC‑GGGTCAGGGAATTAGCGCGGGCTTTATCCAGCGGTTTg                                                                             <  2:8139131/93‑1 (MQ=255)

              gggACATCACGTCTCCTCGGTTAATCGGTGGGTAGATGCTGAGTGATAAAGTGGC‑GGGGCAGGGGATTAGGGCGGGGGTTATTCCGCGGGTTg                                                                             >  1:5434694/1‑93 (MQ=255)

               ggACATCACGTCTCCTCGGTTAATCGGTGGGTAGATGCTGAGTGATAAAGTGGC‑GGGGCCGCGGATTAGCGCCGGGCTTTTCCCGCGCTTTGc                                                                            >  2:4943055/1‑93 (MQ=255)

               ggACATCACGTCTCCTCGGTTAATCGGTGGGTAGATGCTGAGTGATAAAGTGGC‑GGGGCAGGGGAATAATGCGGGGTTTATTCAGCGGTTTGc                                                                            >  2:4553065/1‑93 (MQ=255)

                  cATCACGTCTCCTCGGTTAATCGGTGGGTAGATGCTGAGTGATAAAGTGGC‑GGGTCAGGGAATTAGCGCGGGCTTTATCCAGCGGTTTGCCGc                                                                         <  2:5262277/93‑1 (MQ=255)

                   aTCACGTCTCCTCGGTTAATCGGTGGGTAGATGCTGAGTGATAAAGTGGC‑GGGACAGGGGAATAGCGCGGGGTTTTTCCCGCGGGTTGTCGCt                                                                        >  1:2882838/1‑93 (MQ=255)

                    tCACGTCTCCTCGGTTAATCGGTGGGTAGATGCTGAGTGATAAAGTGGC‑GGGGCCGGGGATTAGCGCGGGCTTTATCCAGCGCGTTGCCGCTc                                                                       >  2:3071713/1‑93 (MQ=255)

                      aCGTCTCCTCGGTTAATCGGTGGGTAGATGCTGAGTGATAAAGTGGC‑GGGGCAGGGGAATAGCGCGGGGTTTTTTCAGCGGGTTGTCGCTccg                                                                     >  2:107386/1‑91 (MQ=255)

                       cGTCTCCTCGGTTAATCGGTGGGTAGATGCTGAGTGATAAAGTGGC‑GGGGCAGGGGATTAGGGCGGGCTTTTTTCAGCGGGGTTTCGCTCaga                                                                    >  2:94056/1‑93 (MQ=255)

                       cGTCTCCTCGGTTAATCGGTGGGTAGATGCTGAGTGATAAAGTGGC‑GGGGCAGGGGAATCTCGCGGGCGTTTTTCAACGGTGTGTCGCTCaga                                                                    >  1:999722/1‑93 (MQ=255)

                        gTCTCCTCGGTTAATCGGTGGGTAGATGCTGAGTGATAAAGTGGCGGGGGCGGGGAATT‑GCGCGGGCTTTTTCCAGCGGGTTGGCGCTCcgag                                                                   >  1:5240177/1‑93 (MQ=255)

                        gTCTCCTCGGTTAATCGGTGGGTAGATGCTGAGTGATAAAGTGGC‑GGGTCAGGGAATTAGCGCGGGCTTTATCCAGCGGTTTGCCGCTCagag                                                                   <  2:7133798/93‑1 (MQ=255)

                          ctcctcGGTTAATCGGTGGGTAGATGCTGAGTGATAAAGTGGC‑GGGTCAGGGAATTAGCGCGGGCTTTATCCAGCGGTTTGCCGCTCAGAGcc                                                                 <  1:8171636/93‑1 (MQ=255)

                          ctcctcGGTTAATCGGTGGGTAGATGCTGAGTGATAAAGTGGC‑GGGGCAGGGGATTAGGGCGGGCCTTATCCAGCGGGTTTCCGCTCCGAGcc                                                                 >  1:6458383/1‑93 (MQ=255)

                          ctcctcGGTTAATCGGTGGGTAGATGCTGAGTGATAAAGTGGC‑GGGGCAGGGGATTAGCGCGGGGTTTATTCAGCGGTTTGTCGCTCCGAAcc                                                                 >  2:569281/1‑93 (MQ=255)

                           tcctcGGTTAATCGGTGGGTAGATGCTGAGTGATAAAGTGGC‑GGGTCAGGGGAATAGCGCGGGGTTTATTCAGCGGTTTGCCGCTCAGCGCcg                                                                >  2:1564640/1‑93 (MQ=255)

                           tcctcGGTTAATCGGTGGGTAGATGCTGAGTGATAAAGTGGC‑GGGTCAGGGAATTAGCGCGGGCTTTATCCAGCGGTTTGCCGCTCAGAGCcg                                                                <  2:8560350/93‑1 (MQ=255)

                           tcctcGGTTAATCGGTGGGTAGATGCTGAGTGATAAAGTGGC‑GGGGCGGGGGATTTGCGCGGGGGTTTTTCAGCGGGTTTCCGCTCACAGCcg                                                                >  2:3142509/1‑93 (MQ=255)

                            cctcGGTTAATCGGTGGGTAGATGCTGAGTGATAAAGTGGC‑GGGTCAGGGAATTAGCGCGGGCTTTATCCAGCGGTTTGCCGCTCAGAGCcgc                                                               <  1:5842877/93‑1 (MQ=255)

                            cctcGGTTAATCGGTGGGTAGATGCTGAGTGATAAAGTGGC‑GGGTCAGGGAATTAGCGCGGGCTTTATCCAGCGGTTTGCCGCTCAGAGCcgc                                                               <  1:4967774/93‑1 (MQ=255)

                             ctcGGTTAATCGGTGGGTAGATGCTGAGTGATAAAGTGGC‑GGGTCAGGGAATTAGCGCGGGCTTTATCCAGCGGTTTGCCGCTCAGAGCcgcg                                                              <  1:6036417/93‑1 (MQ=255)

                             ctcGGTTAATCGGTGGGTAGATGCTGAGTGATAAAGTGGC‑GGGGCAGGGGATTAGGGCGGGGTTTATTCAGCGGGTTGCCGCTCAGAGCcgcg                                                              >  2:6894541/1‑93 (MQ=255)

                                ggTTAATCGGTGGGTAGATGCTGAGTGATAAAGTGGC‑GGGGCAGGGGATTAGGGCGGGGTTTTTTCCGCGGTTTTGCGCTCAGAGgcgcgcgc                                                           >  1:5572846/1‑93 (MQ=255)

                                 gTTAATCGGTGGGTAGATGCTGAGTGATAAAGTGGC‑GGGGGCGGGAATTAGCGCGGGGTTTATCCACCGGGTTGCCGCTCAGAGCGgcgcgcg                                                          >  2:3588375/1‑92 (MQ=255)

                                  ttAATCGGTGGGTAGATGCTGAGTGATAAAGTGGC‑GGGTCAGGGAATTAGCGCGGGCTTTATCCAGCGGTTTGCCGCTCAGAGCCGCGCGCAg                                                         <  1:6083919/93‑1 (MQ=255)

                                  ttAATCGGTGGGTAGATGCTGAGTGATAAAGTGGC‑GGGGCAGGGGATTAGCGCGGGCTTTATTCAGCGGTTTGCCGCTCAGAGCCGCGCGCac                                                         >  2:1344754/1‑92 (MQ=255)

                                     aTCGGTGGGTAGATGCTGAGTGATAAAGTGGC‑GGGGGAGGGAATTAGCGCGGGGTTTATCCAGCGGGTTGCCGCTCAGAGCCGCGCGCAGCCa                                                      >  1:5533398/1‑93 (MQ=255)

                                     aTCGGTGGCAAAATGCTGAGTGATAAGGTGGC‑GAGTTAGGCAATGAGCGCGGTCTTTATCCAGCGGTTTGCCACTCAGAGCCACGCGCAGCCa                                                      <  2:10031401/93‑1 (MQ=255)

                                      tCGGTGGGTAGATGCTGAGTGATAAAGTGGC‑GGGTCAGGGAATTAGCGCGGGCTTTATCCAGCGGTTTGCCGCTCAGAGCCGCGCGCAGCCAt                                                     <  2:6091860/93‑1 (MQ=255)

                                      tCGGTGGGTAGATGCTGAGTGATAAAGTGGC‑GGGGCAGGGAAATAGCGCGGGCTTTATCCAGCGGTTTGCCGCTCCGAGGCGCGCGCAGccca                                                     >  2:5366070/1‑91 (MQ=255)

                                       cGGTGGGTAGATGCTGAGTGATAAAGTGGC‑GGGTCAGGGAATTAGCGCGGGCTTTATTCACCGGTTTGCCGCTCAGAGCCGCGCGCAGCCATa                                                    >  2:9672235/1‑93 (MQ=255)

                                        ggTGGGTAGATGCTGAGTGATAAAGTGGC‑GGGTCAGGGAATTAGCGCGGGCTTTATCCAGCGGTTTGCCGCTCAGAGCCGCGCGCAGCCATaa                                                   <  2:6532522/93‑1 (MQ=255)

                                         gTGGGTAGATGCTGAGTGATAAAGTGGC‑GGGTCAGGGAATTAGCGCGGGCTTTATCCAGCGGTTTGCCGCTCAGAGCCGCGCGCAGCCATAAt                                                  <  2:4928164/93‑1 (MQ=255)

                                           gggTAGATGCTGAGTGATAAAGTGGC‑GGGTCAGGGAATTAGCGCGGGCTTTATCCAGCGGTTTGCCGCTCAGAGCCGCGCGCAGCCATAATcc                                                <  2:6367745/93‑1 (MQ=255)

                                           gggTAGATGCTGAGTGATAAAGTGGC‑GGGTCAGGGAATTAGCGCGGGCTTTATCCAGCGGTTTGCCGCTCAGAGCCGCGCGCAGCCATAATcc                                                <  1:2997391/93‑1 (MQ=255)

                                            ggTAGATGCTGAGTGATAAAGTGGC‑GGGTCAGGGAATTAGCGCGGGCTTTATCCAGCGGTTTGCCGCTCAGAGCCGCGCGCAGCCATAATCCa                                               <  2:6127156/93‑1 (MQ=255)

                                            ggTAGATGCTGAGTGATAAAGTGGC‑GGGGCAGGGGATTAGCGCGGGCTTTATCCAGCGGGTTGCCGCTCAGAGCCGCGCGCAGCCATAATCCa                                               >  1:8119833/1‑93 (MQ=255)

                                              tAGATGCTGAGTGATAAAGTGGC‑GGGTCAGGGAATTAGCGCGGGCTTTATCCAGCGTTTTGCCGCTCAGAGCCGCGCGCAGCCATAATCCatc                                             <  1:321253/93‑1 (MQ=255)

                                                gATGCTGAGTGATAAAGTGGC‑GGGTCAGGGAATTAGCGCGGGCTTTATCCAGCGGTTTGCCGCTCAGAGCCGCGCGCAGCCATAATCCatcaa                                           <  1:1380629/93‑1 (MQ=255)

                                                gATGCTGAGTGATAAAGTGGC‑GGGTCAGGGAATTAGCGCGGGCTTTATCCAGCGGTTTGCCGCTCAGAGCCGCGCGCAGCCATAATCCatcaa                                           <  1:5161271/93‑1 (MQ=255)

                                                gATGCTGAGTGATAAAGTGGC‑GGGTCAGGGAATTAGCGCGGGCTTTATCCAGCGGTTTGCCGCTCAGAGCCGCGCGCAGCCATAATCCatcaa                                           <  2:5966147/93‑1 (MQ=255)

                                                gATGCTGAGTGATAAAGTGGC‑GGGTCAGGGAATTAGCGCGGGCTTTATCCAGCGGTTTGCCGCTCAGAGCCGCGCGCAGCCATAATCCatcaa                                           <  1:1864937/93‑1 (MQ=255)

                                                  tGCTGAGTGATAAAGTGGC‑GGGTCAGGGAATTAGCGCGGGGTTTTTCCAGCGGTTTGTCCCTCCGAGCCGCGCGCCGCCCTAATCCctccatt                                         >  2:5718262/1‑92 (MQ=255)

                                                  tGCTGAGTGATAAAGTGGC‑GGGTCAGGGAATTAGCGCGGGCTTTATCCAGCGGTTTGCCGCTCAGAGCCGCGCGCAGCCATAATCCatcaatc                                         <  2:2595598/93‑1 (MQ=255)

                                                  tGCTGAGTGATAAAGTGGC‑GGGTCAGGGAATTAGCGCGGGCTTTATCCAGCGGTTTGCCGCTCAGAGCCGCGCGCAGCCATAATCCatcaatc                                         <  1:6190651/93‑1 (MQ=255)

                                                  tGCTGAGTGATAAAGAGGC‑GGGGGAGGGAATTAGCGCGGGCTTTATTCAGCGGTTTGCCGCTCAGAGACGCGCGCAGCCATAAACCatcaata                                         >  2:9921118/1‑92 (MQ=255)

                                                     tGAGTGATAAAGTAGA‑GGGACAGGGAATTAGCGAGGGCTTTATCCAGCGGTTTGCCGCTCAGAGCCGCGCGCAGCCATAATCCATCAATCAgc                                      <  1:8944598/93‑1 (MQ=255)

                                                        gTGATAAAGTGGC‑GGGTCAGGGAATTAGCGCGGGCTTTATCCAGCGGTTTGCCGCTCAGAGCCGCGCGCAGCCATAATCCATCAATCAGcgcg                                   <  1:2549642/93‑1 (MQ=255)

                                                          gATAAAGTGGC‑GGGTCAGGGAATTAGCGCGGGCTTTATCCAGCGGTTTGCCGCTCAGAGCCGCGCGCAGCCATAATCCATCAATCAGCGCGGc                                 <  1:16622/93‑1 (MQ=255)

                                                          gATAAAGTGGC‑GGGTCAGGGAATTAGCGCGGGCTTTATCCAGCGGTTTGCCGCTCAGAGCCGCGCGCAGCCATAATCCATCAATCAGCGCGGc                                 <  2:4544262/93‑1 (MQ=255)

                                                           agaaaGTGGC‑GGCGTAGGGAATTGGCGCGTGCTTTATCTGGCGGTTTGCCGCTCCGAGCCGCGCGCAGCCATAATCCATCAATCAGCGCGGcc                                <  2:764606/91‑1 (MQ=255)

                                                           aTAAAGTGGC‑GGGTCAGGGAATTAGCGCGGGCTTTATCCAGCGGTTTGCCGCTCAGAGCCGCGCGCAGCCATAATCCATCAATCAGCGCGGcc                                <  2:9847668/93‑1 (MQ=255)

                                                            tAAAGTGGC‑GGGTCAGGGAATTAGCGCGGGCTTTATCCAGCGGTTTGCCGCTCAGAGCCGCGCGCAGCCATAATCCATCAATCAGCGCGGCCa                               <  2:3639494/93‑1 (MQ=255)

                                                               aGTGGC‑GGGTCAGGGAATTAGCGCGGGCTTTATCCAGCGGTTTGCCGCTCAGAGCCGCGCGCAGCCATAATCCATCAATCAGCGCGGCTAGGc                            <  2:4259121/93‑1 (MQ=255)

                                                                   gC‑GGGGCAGGGAATTAGCGCGGGCTTTATCCAGCGGTTTGCCGCTCAGAGCCGCGCGAAGCCATAATCCATAAATCAGCGCGGCCAGGCCGTa                        <  1:1826194/93‑1 (MQ=255)

                                                                      gggTCGGGGAATTAGCGCGGGCTTTATCCAGCGGTTTGCCGCTCAGAGCCGCGCGCAGCCATAATCCATCAATCAGCGCGGCCAGGCCGTAGc                      <  1:4233044/93‑1 (MQ=255)

                                                                      gggTCAGGGAATTAGCGCGGGCTTTATCCAGCGGTTTGCCGCTCAGAGCCGCGCGCAGCCATAATCCATCAATCAGCGCGGCCAGGCCGTAGc                      <  1:3114278/93‑1 (MQ=255)

                                                                        gTCAGGGAATTAGCGCGGGCTTTATCCAGCGGTTTGCCGCTCAGAGCCGCGCGCAGCCATAATCCATCAATCAGCGCGGCCAGGCCGTAGccc                    >  1:947472/1‑93 (MQ=255)

                                                                        gTCAGGGAATTAGCGCGGGCTTTATCCAGCGGTTTGCCGCTCAGAGCCGCGCGCAGCCATAATCCATCAATCAGCGCGGCCAGGCCGTAGccc                    >  2:7486331/1‑93 (MQ=255)

                                                                         tCAGGGAATTAGCGCGGGCTTTATCCAGCGGTTTGCCGCTCAGAGCCGCGCGCAGCCATAATCCATCAATCAGCGCGGCCAGGCCGTAGCCCg                   >  1:3943261/1‑93 (MQ=255)

                                                                          cAGGGAATTAGCGCGGGCTTTATCCAGCGGTTTGCCGCTCAGAGCCGCGCGCAGCCATAATCCATCAATCAGCGCGGCCAGGCCGTAGCCCGc                  >  2:216517/1‑93 (MQ=255)

                                                                          cAGGGAATTAGCGCGGGCTTTATCCAGCGGTTTGCCGCTCAGAGCCGCGCGCAGCCATAATCCATCAATCAGCGCGGCCAGGCCGTAGCCCGc                  <  1:5907521/93‑1 (MQ=255)

                                                                           cggtaaTTACCGCGGGCTTTATCAAGGGGTTTGCCGCTCAGAGCCGCGCGCAGCCATAATCCATCAATCAGCGCGGCCAGGCCGTAGCCCGCt                 <  1:4665113/89‑1 (MQ=255)

                                                                           aGGGAATTAGCGCGGGCTTTATCCAGCGGTTTGCCGCTCAGAGCCGCGCGCAGCCATAATCCATCAATCAGCGCGGCCAGGCCGTAGCCCGCt                 >  1:8358015/1‑93 (MQ=255)

                                                                           aGGGAATTAGCGCGGGCTTTATCCAGCGGTTTGCCGCTCAGAGCCGCGCGCAGCCATAATCCATCAATCAGCGCGGCCAGGCCGTAGCCCGCt                 >  1:2092636/1‑93 (MQ=255)

                                                                            gggAATTAGCGCGGGCTTTATTCAGCGGTTTGCCGCTCAGAGCCGCGCGCAGCCATACTCCATCAATCAGCGCGGCCAGGCCGTAGCCCGCtt                >  1:7039475/1‑93 (MQ=255)

                                                                            gggAATTAGCGCGGGCTTTATCCAGCGGTTTGCCGCTCAGAGCCGCGCGCAGCCATAATCCATCAATCAGCGCGGCCAGGCCGTAGCCCGCtt                >  2:17084/1‑93 (MQ=255)

                                                                              gAATTAGCGCGGGCTTTATCCAGCGGTTTGCCGCTCAGAGCCGCGCGCAGCCATAATCCATCAATCAGCGCGGCCAGGCCGTAGCCCGCTTcc              >  1:4115443/1‑93 (MQ=255)

                                                                              gAATTAGCGCGGGCTTTATCCAGCGGTTTGCCGCTCAGAGCCGCGCGCAGCCATAATCCATCAATCAGCGCGGCCAGGCCGTAGCCCGCTTcc              <  1:2708099/93‑1 (MQ=255)

                                                                               aaTTAGGGCGGGCTTTATCCAGCGGTTTGCCGCGCAGAGCCGCGCGCAGCCATAATCCATCAATCAGCGCGGCCAGGCCGTAGCCCGCTTCCt             <  2:2323202/93‑1 (MQ=255)

                                                                               aaTTAGCGCGGGCTTTATCCAGCGGTTTGCCGCTCAGAGCCGCGCGCAGCCATAATCCATCAATCAGCGCGGCCAGGCCGTAGCCCGCTTCCt             <  1:5304832/93‑1 (MQ=255)

                                                                               aaTTAGCGCGGGCTTTATCCAGCGGTTTGCCGCTCAGAGCCGCGCGCAGCCATAATCCATCAATCAGCGCGGCCAGGCCGTAGCCCGCTTCCt             >  2:8401569/1‑93 (MQ=255)

                                                                               aaTTAGCGCGGGCTTTATCCAGCGGTTTGCCGCTCAGAGCCGCGCGCAGCCATAATCCATCAATCAGCGCGGCCAGGCCGTAGCCCGCTTCCt             <  1:8610717/93‑1 (MQ=255)

                                                                                aTTAGCGCGGGCTTTATCCAGCGGTTTGCCGCTCAGAGCCGCGCGCAGCCATAATCCATCAATCAGCGCGGCCAGGCCGTAGCCCGCTTCCtg            <  1:7132050/93‑1 (MQ=255)

                                                                                aTTAGCGCGGGCTTTATCCAGCGGTTTGCCGCTCAGAGCCGCGCGCAGCCATAATCCATCAATCAGCGCGGCCAGGCCGTAGCCCGCTTCCtg            >  1:4032719/1‑93 (MQ=255)

                                                                                aTTAGCGCGGGCTTTATCCAGCGGTTTGCCGCTCAGAGCCGCGCGCAGCCATAATCCATCAATCAGCGCGGCCAGGCCGTAGCCCGCTTCCtg            <  1:9982405/93‑1 (MQ=255)

                                                                                aTTAGCGCGGGCTTTATCCAGCGGTTTGCCGCTCAGAGCCGCGCGCAGCCATAATCCATCAATCAGCGCGGCCAGGCCGTAGCCCGCTTCCtg            >  1:3167666/1‑93 (MQ=255)

                                                                                 ttAGCGCGGGCTTTATCCAGCGGTTTGCCGCTCAGAGCCGCGCGCAGCCATAATCCATCAATCAGCGCGGCCAGGCCGTAGCCCGCTTCCtgt           <  1:5099465/93‑1 (MQ=255)

                                                                                 ttAGCGCGGGCTTTATCCAGCGGTTTGCCGCTCAGAGCCGCGCGCAGCCATAATCCATCAATCAGCGCGGCCAGGCCGTAGCCCGCTTCCtgt           >  1:9383643/1‑93 (MQ=255)

                                                                                   aGCGCGGGCTTTATCCAGCGGTTTGCCGCTCAGAGCCGCGCGCAGCCATAATCCATCAATCAGCGCGGCCAGGCCGTAGACCGCTTACTGTGc         >  1:724277/1‑93 (MQ=255)

                                                                                    gcgcGGGCTTTATCCAGCGTTTTGCCGCTCAGAGCCGCGCGCAGCCATAATCCATCAATCAGCGCGGCCAGGCCGTAGCCCGCTTCCTGTGcc        <  1:1932032/93‑1 (MQ=255)

                                                                                    gcgcGGGCTTTATCCAGCGGTTTGCCGCTCAGAGCCGCGCGCAGCCATAATCCATCAATCAGCGCGGCCAGGCCGTAGCCCGCTTCCTGTGcc        <  2:7693801/93‑1 (MQ=255)

                                                                                     cgcgGGTTTTATCCAGCGGTTTGCCGCTCAGAGCCGCGCGCAGCCATAATCCATCAATCAGCGCGGCCAGGCCGTAGCCCGCTTCCTGTGCCt       <  2:31865/93‑1 (MQ=255)

                                                                                     cgcgGGCTTTATCCACCGGTTTGCCGCTCAGAGCCGCGCGCAGCCATAATCCATCAATCAGCGCGGCCAGGCCGTAGCCCGCTTCCTGTGCCt       <  1:9755160/93‑1 (MQ=255)

                                                                                      gcgGGCTTTATCCAGCGGTTTGCCGCTCAGAGCCGCGCGCAGCCATAATCCATCAATCAGCGCGGCCAGGCCGTCGGCCGCCTCCTGTGCCTg      >  1:7569512/1‑93 (MQ=255)

                                                                                        gggCTTTATCCAGCGGTTTGCCGCTCAGAGCCGCGCGCAGCCATAATCCATCAATCAGCGCGGCCAGGCCGTAGCCCGCTTCCTGTGCCTGtt    >  2:1737221/1‑93 (MQ=255)

                                                                                        gggCTTTATCCAGCGGTTTGCCGCTCAGAGCAGCGCGCAGCCATAATCCATCAATCAGCGCGGCCAGGCCGTAGCCCGCTTCCTGTGCCTGtt    <  2:6757196/93‑1 (MQ=255)

                                                                                          gTTTTATCCAGCGGTTTGCCGCTCAGACCCGCGCGCAGCCATAATCCATCAATCAGCGCGGCCAGGCCGTAGCCCGCTTCCTGTGCCTGTTcg  <  2:8652604/93‑1 (MQ=255)

CTGTTCTGCCATTCGGGACATCACGTCTCCTCGGTTAATCGGTGGGTAGATGCTGAGTGATAAAGTGGC‑GGGTCAGGGAATTAGCGCGGGTTTTATCCAGCGGTTTGCCGCTCAGAGCCGCGCGCAGCCATAATCCATCAATCAGCGCGGCCAGGCCGTAGCCCGCTTCCTGTGCCTGTTCG  >  NC_000913/327937‑328118

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`