BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,796,091	A→G	intergenic (+26/+21)	ygaP → / ← stpA	hypothetical protein/StpA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,796,091	0	A	G	100.0%	948.0 / NA	296	intergenic (+26/+21)	ygaP/stpA	hypothetical protein/StpA
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (142/154); total (142/154)

Only 100 of 317 total aligned reads displayed.

GAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGCTTCGGTGTACGGCC  >  NC_000913/2796001‑2796180

  aTCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGa                                                                                       <  1:4143607/93‑1 (MQ=255)

  aTCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGa                                                                                       >  2:22751/1‑93 (MQ=255)

  aTCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGa                                                                                       >  2:1457273/1‑93 (MQ=255)

  aTCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGa                                                                                       >  1:3074104/1‑93 (MQ=255)

   tCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGAc                                                                                      <  1:7416503/93‑1 (MQ=255)

   tCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGAc                                                                                      >  1:2764392/1‑93 (MQ=255)

     aGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACAt                                                                                    >  1:6196739/1‑93 (MQ=255)

     aGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACAt                                                                                    <  1:7046955/93‑1 (MQ=255)

     aGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACAt                                                                                    <  1:7310752/93‑1 (MQ=255)

      gCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATc                                                                                   >  1:8391681/1‑93 (MQ=255)

      gCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATc                                                                                   <  1:3658210/93‑1 (MQ=255)

       cGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATcc                                                                                  <  1:6987206/93‑1 (MQ=255)

         gTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGCAATCCgg                                                                                >  2:2106352/1‑93 (MQ=255)

         gTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCgg                                                                                <  1:4938063/93‑1 (MQ=255)

         gTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCgg                                                                                >  2:1557863/1‑93 (MQ=255)

          tttttGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGc                                                                               >  2:5933985/1‑93 (MQ=255)

          tttttGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGc                                                                               <  2:6604761/93‑1 (MQ=255)

          tttttGTGGAATGGCAAGGTTGTTAAATAAGATGCCGTGGAACCAACTAGCATGATAAGCGAGGCTCGACGAGCCCTACCGGCGACACCCGGc                                                                               >  1:1440211/1‑93 (MQ=255)

           ttttGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGcc                                                                              <  2:6950401/93‑1 (MQ=255)

            tttGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCt                                                                             >  2:1085735/1‑93 (MQ=255)

             ttGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTc                                                                            <  2:9864620/93‑1 (MQ=255)

              tgtgGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCa                                                                           >  2:8274680/1‑93 (MQ=255)

               gtgGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTccg                                                                          >  2:7256338/1‑91 (MQ=255)

               gtgGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAg                                                                          >  2:2622690/1‑93 (MQ=255)

               gtgGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGAAATCCGGCCTCAg                                                                          >  2:5142806/1‑93 (MQ=255)

                  gAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTaa                                                                       <  1:3377459/93‑1 (MQ=255)

                  gAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTaa                                                                       <  2:1319240/93‑1 (MQ=255)

                  gAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTaa                                                                       >  1:239714/1‑93 (MQ=255)

                   aaTGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAAt                                                                      <  2:6347664/93‑1 (MQ=255)

                   aaTGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAAt                                                                      <  1:5108379/93‑1 (MQ=255)

                     tGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTa                                                                    <  1:2814349/93‑1 (MQ=255)

                     tGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTa                                                                    >  2:4055813/1‑93 (MQ=255)

                     tGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTa                                                                    >  2:4599728/1‑93 (MQ=255)

                     tGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTa                                                                    <  2:7756673/93‑1 (MQ=255)

                      ggCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCCGCAATTAg                                                                   >  2:715379/1‑93 (MQ=255)

                      ggCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAg                                                                   <  2:9263335/93‑1 (MQ=255)

                         aaGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATc                                                                >  2:4273565/1‑93 (MQ=255)

                         aaGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATc                                                                <  1:7639143/93‑1 (MQ=255)

                          aGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCa                                                               <  1:8307393/93‑1 (MQ=255)

                          aGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCa                                                               >  2:3830560/1‑93 (MQ=255)

                          aGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCa                                                               >  1:8451786/1‑93 (MQ=255)

                               gttAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGaaa                                                          <  1:8670885/93‑1 (MQ=255)

                               gttAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGaaa                                                          <  2:8772620/93‑1 (MQ=255)

                               gttAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGaaa                                                          >  1:6093216/1‑93 (MQ=255)

                                ttAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAAt                                                         <  2:1876633/93‑1 (MQ=255)

                                ttAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAAt                                                         <  1:4369444/93‑1 (MQ=255)

                                   gATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAAtcgt                                                      <  1:1634568/93‑1 (MQ=255)

                                    aTAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAAtcgtc                                                     <  1:3832265/93‑1 (MQ=255)

                                     tAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAAtcgtcg                                                    >  2:8374299/1‑93 (MQ=255)

                                      aaGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCga                                                   >  1:9700780/1‑93 (MQ=255)

                                      aaGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCga                                                   <  2:2673425/93‑1 (MQ=255)

                                       aGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCgag                                                  >  2:7571617/1‑93 (MQ=255)

                                        gATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCgaga                                                 >  2:9462387/1‑93 (MQ=255)

                                        gATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCgaga                                                 <  1:4203364/93‑1 (MQ=255)

                                          tGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCgagaga                                               <  2:1685850/93‑1 (MQ=255)

                                            ccGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGAtt                                             <  2:6662561/93‑1 (MQ=255)

                                              gTGGAACCAACGAGCTTGAGAATCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCCGTCATTAGATCAGGAAATCGGCGAGAGATTTa                                           >  1:2017653/1‑93 (MQ=255)

                                              gTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTa                                           >  1:8902423/1‑93 (MQ=255)

                                              gTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTa                                           >  1:3590597/1‑93 (MQ=255)

                                               tGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTAc                                          <  1:9790087/93‑1 (MQ=255)

                                               tGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTAc                                          >  2:1966240/1‑93 (MQ=255)

                                               tGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTAc                                          <  2:4544526/93‑1 (MQ=255)

                                                ggAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTAcc                                         <  2:3312084/93‑1 (MQ=255)

                                                ggAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTAcc                                         >  2:5621646/1‑93 (MQ=255)

                                                 gAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCt                                        <  1:1781784/93‑1 (MQ=255)

                                                 gAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCt                                        >  2:4851326/1‑93 (MQ=255)

                                                  aaCCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCtt                                       >  2:8395047/1‑93 (MQ=255)

                                                   accaccGAGCTTGAGAAGCGACGCCGTACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTc                                      <  1:4483393/93‑1 (MQ=255)

                                                   aCCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTc                                      <  1:5542421/93‑1 (MQ=255)

                                                    ccAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCt                                     <  1:6616632/93‑1 (MQ=255)

                                                     cAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTg                                    >  1:1263060/1‑93 (MQ=255)

                                                      aaCGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGc                                   >  2:8894071/1‑93 (MQ=255)

                                                      aaCGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGc                                   <  1:1516838/93‑1 (MQ=255)

                                                       aCGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGcc                                  >  2:3522612/1‑93 (MQ=255)

                                                        cGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCa                                 <  1:1159535/93‑1 (MQ=255)

                                                        cGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCa                                 <  1:6875202/93‑1 (MQ=255)

                                                         gAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAg                                <  1:10040244/93‑1 (MQ=255)

                                                          aGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAgc                               <  2:6363828/93‑1 (MQ=255)

                                                             ttGAGAAGCGCCGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGcc                            <  2:5715822/93‑1 (MQ=255)

                                                             ttGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGcc                            >  2:1193429/1‑93 (MQ=255)

                                                             ttGAGAAGCGAAGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGTCAGCGcc                            >  2:8014999/1‑93 (MQ=255)

                                                               gagaAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTg                          <  1:7920695/93‑1 (MQ=255)

                                                                 gaAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAg                        <  2:583267/93‑1 (MQ=255)

                                                                 gaAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAg                        <  1:2938244/93‑1 (MQ=255)

                                                                 gaAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAg                        <  1:3754762/93‑1 (MQ=255)

                                                                 gaAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAg                        >  1:7478654/1‑93 (MQ=255)

                                                                    gCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCaa                     <  1:5804999/93‑1 (MQ=255)

                                                                       aCGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTg                  >  1:2299431/1‑93 (MQ=255)

                                                                          ccGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGCt               <  1:9076209/93‑1 (MQ=255)

                                                                          ccGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGCt               <  2:4940598/93‑1 (MQ=255)

                                                                           cGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGCtt              <  2:4097418/93‑1 (MQ=255)

                                                                           cGGACGAGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGCtt              >  1:9841900/1‑93 (MQ=255)

                                                                                gcgcCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGCTTCGgtg         >  2:2762318/1‑93 (MQ=255)

                                                                                  gcCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGCTTCGGTGTa       >  2:286095/1‑93 (MQ=255)

                                                                                    ccTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGCTTCGGTGTACg     >  1:904023/1‑93 (MQ=255)

                                                                                     cTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGCTTCGGTGTACgg    >  2:2417064/1‑93 (MQ=255)

                                                                                     cTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGCTTCGGTGTACgg    <  2:913502/93‑1 (MQ=255)

                                                                                     cTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGCTTCGGTGTACgg    >  2:3006870/1‑93 (MQ=255)

                                                                                      tAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGCTTCGGTGTACGGc   >  2:1748270/1‑93 (MQ=255)

                                                                                      tAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGCTTCGGTGTACGGc   <  1:5373735/93‑1 (MQ=255)

GAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGCTTCGGTGTACGGCC  >  NC_000913/2796001‑2796180

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`