BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,834,144	T→C	L435L (TTA→TTG)	hypF ←	transcriptional regulatory protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,834,144	0	T	C	100.0%	864.9 / NA	271	L435L (TTA→TTG)	hypF	transcriptional regulatory protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (149/122); total (149/122)

Only 100 of 283 total aligned reads displayed.

TTCACGCGCCCACTGGCTGGAGACATAGCCCGGATGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGTAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCAACACCGCTTGTTCACCGCGCACCAGGCA  >  NC_000913/2834054‑2834233

ttCACGCGCCCACTGGCTGGAGACATAGCCCGGATGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCaa                                                                                         <  1:476061/93‑1 (MQ=255)

ttCACGCGCCCACTGGCTGGAGACATAGCCCGGATGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCaa                                                                                         >  2:6529402/1‑93 (MQ=255)

   aCGCGCCCACTGGCTGGAGACATAGCCCGGATGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGc                                                                                      >  1:3181174/1‑93 (MQ=255)

     gcgcCCACTGGCTGGAGACATAGCCCGGATGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCtt                                                                                    <  1:9413573/93‑1 (MQ=255)

     gcgcCCACTGGCTGGAGACATAGCCCGGATGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAAGCGCAAAGCtt                                                                                    >  2:9219883/1‑93 (MQ=255)

     gcgcCCACTGGCTGGAGACATAACCCGGATGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGTAGTTGTTTTGCATCAGGCGCAACGCtt                                                                                    >  2:7023568/1‑93 (MQ=255)

        cccACTGGCTGGAGACATAGCCCGGATGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTcgc                                                                                 >  1:4955224/1‑93 (MQ=255)

           aCTGGCTGGAGACATAGCCCGGATGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCCACGCTTCGCGcc                                                                              >  2:7784109/1‑93 (MQ=255)

           aCTGGCTGGAGACATAGCCCGGATGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGcc                                                                              >  1:4510742/1‑93 (MQ=255)

             tggctggAGACATAGCCCGGATGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCAc                                                                            >  2:8641787/1‑93 (MQ=255)

             tggctggAGACATAGCCCGGATGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCAc                                                                            <  2:1999275/93‑1 (MQ=255)

              ggctggAGACATAGCCCGGATGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACt                                                                           >  1:4306044/1‑93 (MQ=255)

               gctggAGACATAGCCCGGATGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTg                                                                          >  2:7486851/1‑93 (MQ=255)

                ctggAGACATAGCCCGGATGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGc                                                                         <  2:5197416/93‑1 (MQ=255)

                 tggAGACATAGCCCGGATGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCa                                                                        >  1:5406989/1‑93 (MQ=255)

                 tggAGACATAGCCCGGATGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCa                                                                        >  2:9158064/1‑93 (MQ=255)

                 tggAGACATAGCCCGGATGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCa                                                                        >  1:8066154/1‑93 (MQ=255)

                  ggAGACATAGCCCGGATGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCAt                                                                       >  2:3478595/1‑93 (MQ=255)

                   gagaCATAGCCCGGATGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATc                                                                      >  2:1535669/1‑93 (MQ=255)

                    agaCATAGCCCGGATGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCt                                                                     <  2:5279927/93‑1 (MQ=255)

                    agaCATAGCCCGGATGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCt                                                                     <  1:5080299/93‑1 (MQ=255)

                     gaCATAGCCCGGATGCGCTTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCAATGCATCTg                                                                    <  2:2261303/93‑1 (MQ=255)

                     gaCATAGCCCGGATGCGCGTCATGCACAACGCATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTg                                                                    >  2:9911576/1‑93 (MQ=255)

                       cctcgCCCGGATGCGCGTTGTCCCCGACGTATCGGTGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGa                                                                  <  1:708007/89‑1 (MQ=255)

                       cATAGCCCGGATGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGa                                                                  >  2:1269501/1‑93 (MQ=255)

                       cATAGCCCGGATGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGa                                                                  >  2:4731323/1‑93 (MQ=255)

                        aTAGCCCGGATGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGAt                                                                 <  2:7911824/93‑1 (MQ=255)

                         tAGCCCGGATGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATg                                                                >  1:2583735/1‑93 (MQ=255)

                           gCCCGGATGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGcc                                                              <  1:1463943/93‑1 (MQ=255)

                            cccGGATGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCa                                                             <  1:8695425/93‑1 (MQ=255)

                             ccGGATGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCAt                                                            <  2:8884821/93‑1 (MQ=255)

                             ccGGATGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCAt                                                            <  1:7250787/93‑1 (MQ=255)

                              cGGATGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATc                                                           <  1:3013342/93‑1 (MQ=255)

                               ggATGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCg                                                          >  1:9681812/1‑93 (MQ=255)

                                gATGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGt                                                         >  2:9425651/1‑93 (MQ=255)

                                 aTGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTc                                                        >  2:2726520/1‑93 (MQ=255)

                                  tGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCa                                                       <  2:6308112/93‑1 (MQ=255)

                                  tGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCa                                                       >  1:10032174/1‑93 (MQ=255)

                                   gcgcGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCAc                                                      >  2:8229181/1‑93 (MQ=255)

                                   gcgcGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCAc                                                      >  2:4306094/1‑93 (MQ=255)

                                        tCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTaaa                                                 <  1:5239400/93‑1 (MQ=255)

                                        tCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTaaa                                                 >  1:4142313/1‑93 (MQ=255)

                                          aTGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATc                                               <  1:2694261/93‑1 (MQ=255)

                                           tGCACAACGTTTTGCGGGGTAAAATCGTAGATGTTTTTCATCAGGCGCAACGCTACGCGCCACTGCATCTGGATGCCATCGGCACCTAAATCg                                              >  2:8940012/1‑93 (MQ=255)

                                           tGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCg                                              >  2:7756027/1‑93 (MQ=255)

                                           tGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCg                                              >  1:5293494/1‑93 (MQ=255)

                                           tGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCg                                              >  1:1297373/1‑93 (MQ=255)

                                            gCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGc                                             >  1:6329240/1‑93 (MQ=255)

                                              acaACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGccc                                           <  1:3748407/93‑1 (MQ=255)

                                               caACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCa                                          >  2:6654347/1‑93 (MQ=255)

                                                aaCGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAg                                         <  1:9244772/93‑1 (MQ=255)

                                                aaCGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAg                                         >  1:5215061/1‑93 (MQ=255)

                                                 aCGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAAACGCCCAGa                                        <  2:9329469/93‑1 (MQ=255)

                                                  cGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGAt                                       <  1:2865907/93‑1 (MQ=255)

                                                  cGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGAt                                       <  1:8186882/93‑1 (MQ=255)

                                                  cGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGAt                                       >  1:7780385/1‑93 (MQ=255)

                                                   gTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATg                                      >  1:3617503/1‑93 (MQ=255)

                                                   gTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATg                                      <  2:2869808/93‑1 (MQ=255)

                                                   gTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATg                                      >  2:2136045/1‑93 (MQ=255)

                                                    tATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGc                                     >  2:6139233/1‑93 (MQ=255)

                                                    tATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGc                                     >  2:39170/1‑93 (MQ=255)

                                                    tATTGCGGGGTAAAATCGGAGATGTTTTGCATCAGGCCCAACGCTTCGCGCCACTGCATCTGGATACCATCGTCACTTAAATCGCCCAGATGc                                     <  2:9704181/93‑1 (MQ=255)

                                                     aTTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCt                                    >  2:1769923/1‑93 (MQ=255)

                                                        gCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGAc                                 >  2:5001003/1‑93 (MQ=255)

                                                         cGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACt                                <  2:4611144/93‑1 (MQ=255)

                                                           gggTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCa                              >  2:6253792/1‑93 (MQ=255)

                                                           gggTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCa                              >  1:601543/1‑93 (MQ=255)

                                                           gggTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCa                              <  1:3856440/93‑1 (MQ=255)

                                                           gggTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCa                              >  2:2502764/1‑93 (MQ=255)

                                                             gTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCAac                            >  1:1924377/1‑93 (MQ=255)

                                                              tAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCAaca                           >  2:5562994/1‑93 (MQ=255)

                                                              tAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCAaca                           >  1:3272121/1‑93 (MQ=255)

                                                              tAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCAaca                           <  1:7559034/93‑1 (MQ=255)

                                                              tAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCACCGCTTAAATCGCCCAGATGCTGACTCGaca                           >  2:73168/1‑93 (MQ=255)

                                                               aaaaTCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCAacac                          <  2:3504638/93‑1 (MQ=255)

                                                                aaaTCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCAACAcc                         <  2:9060732/93‑1 (MQ=255)

                                                                aaaTCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCAACAcc                         >  1:1643942/1‑93 (MQ=255)

                                                                aaaTCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCAACAcc                         >  2:1322734/1‑93 (MQ=255)

                                                                aaaTCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCAACAcc                         <  2:5546421/93‑1 (MQ=255)

                                                                 aaTCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCAACACCg                        >  2:7187614/1‑93 (MQ=255)

                                                                      tAGATGTTTTGCATCAGGCGCAACGCTTCGCGACACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCAACACCGCTTGt                   >  2:8415991/1‑93 (MQ=255)

                                                                       aGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCAACACCGCTTGtt                  <  1:6733301/93‑1 (MQ=255)

                                                                       aGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCAACACCGCTTGtt                  >  2:7946920/1‑93 (MQ=255)

                                                                         aTGTTATGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGTATGCCATCGTCACTTAAAGCGCCCAGATGCTGACTCAACACCGCTTGTTCa                <  2:6550389/93‑1 (MQ=255)

                                                                          tGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCAACACCGCTTGTTCAc               <  1:2063600/93‑1 (MQ=255)

                                                                          tGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCAACACCGCTTGTTCAc               >  1:4856556/1‑93 (MQ=255)

                                                                            ttttGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCAACACCGCTTGTTCACcg             >  2:3745826/1‑93 (MQ=255)

                                                                            ttttGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCAACACCGCTTGTTCACcg             >  2:5821223/1‑93 (MQ=255)

                                                                             tttGCATCAGGCGCACCGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCAACACCGCTTGTTCACcgc            <  1:6192343/93‑1 (MQ=255)

                                                                               tGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCAACACCGCTTGTTCACCgcgc          <  2:10000705/93‑1 (MQ=255)

                                                                                gCATCAGGCGCAACGCTTCGCTCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCAACACCGCTTGTTCACCGCGCa         >  1:1847298/1‑93 (MQ=255)

                                                                                 cATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCAACACCGCTTGTTCACCGCGCAc        <  2:851228/93‑1 (MQ=255)

                                                                                   tCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCAACACCGCTTGTTCACCGCGCACCa      >  2:4894667/1‑93 (MQ=255)

                                                                                   tCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCAACACCGCTTGTTCACCGCGCACCa      <  1:8461207/93‑1 (MQ=255)

                                                                                   tCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCAACACCGCTTGTTCACCGCGCACCa      >  1:6486438/1‑93 (MQ=255)

                                                                                    cAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCAACACCGCTTGTTCACCGCGCACCAg     <  2:3281908/93‑1 (MQ=255)

                                                                                    cAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCAACACCGCTTGTTCACCGCGCACCAg     >  2:4471336/1‑93 (MQ=255)

                                                                                     aGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCAACACCGCTTGTTCACCGCGCACCAgg    <  2:3060604/93‑1 (MQ=255)

                                                                                      ggCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCAACACCGCTTGTTCACCGCGCACCAGGc   <  2:1563299/93‑1 (MQ=255)

                                                                                      ggCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGAATCAACACCGCTTGTTCACCGCGCACCAGGc   >  1:6921087/1‑93 (MQ=255)

TTCACGCGCCCACTGGCTGGAGACATAGCCCGGATGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGTAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCAACACCGCTTGTTCACCGCGCACCAGGCA  >  NC_000913/2834054‑2834233

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`