Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,887,232 A→G G297G (GGT→GGC cysI ← sulfite reductase, alpha subunit

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,887,2320AG94.9% 823.3 / 22.0 294G297G (GGT→GGCcysIsulfite reductase, alpha subunit
Reads supporting (aligned to +/- strand):  ref base A (11/4);  new base G (151/126);  total (163/131)
Fisher's exact test for biased strand distribution p-value = 1.88e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.74e-01

Only 100 of 308 total aligned reads displayed.

CGCGCGACGCTCCACTTCCGCTTTAAACGTCTCAACCCCCACGCGCTCCAGCGTGTATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTACCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGTATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTGCGGGC  >  NC_000913/2887142‑2887321
                                                                                          |                                                                                         
   gcgACGCTCCACTTCCGCTTTAAACGTCTCAACCCCCACGCGCTCCAGCGTGTATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTGCCCCa                                                                                      >  2:6036006/1‑93 (MQ=255)
   gcgACGCTCCACTTCCGCTTTAAACGTCTCAACCCCCACGCGCTCCAGCGTGTATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTACCCCa                                                                                      >  1:3544187/1‑93 (MQ=255)
     gACCCTCCATTTCCGCTTGAAACGTCTCAACCCCCACGCGCTCCAGCGTGTATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTGCCCCAGt                                                                                    <  1:7578163/93‑1 (MQ=255)
      aCGCTCCACTTCCGCTTTAAACGTCTCAACCCCCACGCGCTCCAGCGTGTATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTGCCCCAGTc                                                                                   >  2:7606599/1‑93 (MQ=255)
          tCCACTTCCGCTTTAAACGTCTCAACCCCCACGCGCTCCAGCGTGTATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTGCCCCAGTCACGc                                                                               <  1:10003970/93‑1 (MQ=255)
          tCCACTTCCGCTTTAAACGTCTCAACCCCCACGCGCTCCAGCGTGTATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTGCCCCAGTCACGc                                                                               >  2:2189228/1‑93 (MQ=255)
          tCCACTTCCGCTTTAAACGTCTCAACCCCCACGCGCTCCAGCGTGTATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTGCCCCAGTCACGc                                                                               <  1:4589687/93‑1 (MQ=255)
            cACTTCCGCTTTAAACGTCTCAACCCCCACGCGCTCCAGCGTGTATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTGCCCCAGTCACGCTg                                                                             >  1:2955759/1‑93 (MQ=255)
             aCTTCCGCTTTAAACGTCTCAACCCCCACGCGCTCCAGCGTGTATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTGCCCCAGTCACGCTGa                                                                            <  2:1315898/93‑1 (MQ=255)
             aCTTCCGCTTTAAACGTCTCAACCCCCACGCGCTCCAGCGTGTATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTGCCCCAGTCACGCTGa                                                                            >  1:7856335/1‑93 (MQ=255)
               ttCCGCTTTAAACGTCTCAACCCCCACGCGCTCCAGCGTGTATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTGCCCCAGTCACGCTGAGt                                                                          <  2:1574020/93‑1 (MQ=255)
                  cGCTTTAAACGTCTCAACCCCCACGCGCTCCAGCGTGTATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTGCCCCAGTCACGCTGAGTTGt                                                                       >  2:8022686/1‑93 (MQ=255)
                  cGCTTTAAACGTCTCAACCCCCACGCGCTCCAGCGTGTATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTACCCCAGTCACGCTGAGTTgg                                                                       >  2:3830721/1‑92 (MQ=255)
                    cTTTAAACGTCTCAACCCCCACGCGCTCCAGCGTGTATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTACCCCAGTCACGCTGAGTTGTCa                                                                     <  1:7001481/93‑1 (MQ=255)
                     tttAAACGTCTCACCCCCCGCGCGCTCCAGCGTGTATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTGCCCCAGTCACGCTGAGTTGTCac                                                                    <  2:9654038/93‑1 (MQ=255)
                     tttAAACGTCTCAACCCCCACGCGCTCCAGCGTGTATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTGCCCCAGTCACGCTGAGTTGTCac                                                                    <  2:3093263/93‑1 (MQ=255)
                      ttAAACGTCTCAACCCCCACGCGCTCCAGCGTGTATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTGCCCCAGTCACGCTGAGTTGTCacg                                                                   >  2:4596226/1‑93 (MQ=255)
                       tAAACGTCTCAACCCCCACGCGCTCCAGCGTGTATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTGCCCCAGTCACGCTGAGTTGTCacga                                                                  <  1:6907279/93‑1 (MQ=255)
                        aaaCGTCTCACCCCCCACGCGCTCCAGCGTGTATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTGCCCCAGTCACGCTGAGTTGTCacgac                                                                 <  1:5802197/93‑1 (MQ=255)
                        aaaCGTCTCAACCCCCACGCGCTCCAGCGTGTATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTGCCCCAGTCACGCTGAGTTGTCacgac                                                                 <  1:6316440/93‑1 (MQ=255)
                        aaaCGTCTCAACCCCCACGCGCTCCAGCGTGTATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTACCCCAGTCACGCTGAGTTGTCacgac                                                                 <  1:1483683/93‑1 (MQ=255)
                         aaCGTCTCAACCCCCACGCGCTCCAGCGTGTATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTGCCCCAGTCACGCTGAGTTGTCacgacg                                                                >  1:9660286/1‑93 (MQ=255)
                           cGTCTCAACCCCCACGCGCTCCAGCGTGTATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTGCCCCAGTCACGCTGAGTTGTCACGACGGc                                                              <  2:349391/93‑1 (MQ=255)
                           cGTCTCAACCCCCACGCGCTCCAGCGTGTATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTGCCCCAGTCACGCTGAGTTGTCACGACGGc                                                              <  1:7325016/93‑1 (MQ=255)
                            gTCTCAACCCCCACGCGCTCCAGCGTGTATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTGCCCCAGTCACGCTGAGTTGTCACGACGGCt                                                             >  2:9264187/1‑93 (MQ=255)
                            gTCTCAACCCCCACGCGCTCCAGCGTGTATTTGGTTTTGGCATTTTTACGATCGCTTCGGATGACCCAGTCACGCTGAGTTGTCACGACGGCt                                                             >  2:6945351/1‑93 (MQ=255)
                             tctcAACCCCCACGCGCTCCAGCGTGTATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTGCCCCAGTCACGCTGAGTTGTCACGACGGCtt                                                            <  2:5479309/93‑1 (MQ=255)
                             tctcAACCCCCACGCGCTCCAGCGTGTATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTGCCCCAGTCACGCTGAGTTGTCACGACGGCtt                                                            >  2:1806701/1‑93 (MQ=255)
                             tctcAACCCCCACGCGCTCCAGCGTGTATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTACCCCAGTCACGCTGAGTTGTCACGACGGCtc                                                            >  1:7215389/1‑92 (MQ=255)
                               tcAACCCCCACGCGCTCCAGCGTGTATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTGCCCCAGTCACGCTGAGTTGTCACGACGGCTTCg                                                          >  1:3926350/1‑93 (MQ=255)
                                 aaCCCCCACGCGCTCCAGCGTGTATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTGCCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGc                                                        <  1:8868621/93‑1 (MQ=255)
                                  aCCCCCACGCGCTCCAGCGTGTATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTGCCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGcc                                                       <  2:5257991/93‑1 (MQ=255)
                                   cccccACGCGCTCCAGCGTGTATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTGCCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCa                                                      >  1:1414183/1‑93 (MQ=255)
                                     cccACGCGCTCCAGCGTGTATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTGCCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCAcc                                                    >  1:847971/1‑93 (MQ=255)
                                     cccACGCGCTCCAGCGTGTATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTGCCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCAcc                                                    <  1:6151867/93‑1 (MQ=255)
                                     cccACGCGCTCCAGCGTGTATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTGCCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCAcc                                                    >  2:4911919/1‑93 (MQ=255)
                                      ccACGCGCTCCAGCGTGTATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTGCCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCg                                                   >  1:4499186/1‑93 (MQ=255)
                                       cACGCGCTCCAGCGTGTATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTGCCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGc                                                  >  1:3655397/1‑93 (MQ=255)
                                        aCGCGCTCCAGCGTGTATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTGCCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGcc                                                 >  2:2326730/1‑93 (MQ=255)
                                          gcgcTCCAGCGTGTATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTGCCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAg                                               <  2:1233810/93‑1 (MQ=255)
                                            gcTCCAGCGTGTATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTGCCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCg                                             <  2:8167863/93‑1 (MQ=255)
                                            gcTCCAGCGTGTATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTGCCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCg                                             >  2:7240614/1‑93 (MQ=255)
                                             cTCCAGCGTGTATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTACCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGt                                            >  2:5334835/1‑93 (MQ=255)
                                              tCCAGCGTGTATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTGCCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGTa                                           <  1:8272585/93‑1 (MQ=255)
                                              tCCAGCGTGTATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTGCCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGTa                                           >  2:7454340/1‑93 (MQ=255)
                                              tCCAGCGTGTATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTGCCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGTa                                           <  2:9324102/93‑1 (MQ=255)
                                               ccAGCGTGTATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTGCCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGTAt                                          >  2:4220756/1‑93 (MQ=255)
                                               ccAGCGTGTATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTGCCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGTAt                                          <  2:6209187/93‑1 (MQ=255)
                                               ccAGCGTGTATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTGCCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGTAt                                          >  2:3401017/1‑93 (MQ=255)
                                                cAGCGTGTATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTGCCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGTATg                                         >  2:1947212/1‑93 (MQ=255)
                                                cAGCGTGTATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTGCCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGTATg                                         <  2:306043/93‑1 (MQ=255)
                                                 aGCGTGTATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTGCCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGTATGc                                        <  2:8804841/93‑1 (MQ=255)
                                                 aGCGTGTATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTGCCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGTATGc                                        <  2:8758221/93‑1 (MQ=255)
                                                  gCGTGTATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTGCCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGTATGCt                                       >  1:7509749/1‑93 (MQ=255)
                                                   cGTGTATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTGCCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGTATGCTc                                      <  1:1967818/93‑1 (MQ=255)
                                                    gtgtATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTGCCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGTATGCTcc                                     <  1:7095510/93‑1 (MQ=255)
                                                     tgtATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTGCCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGTATGCTccc                                    >  2:1978038/1‑92 (MQ=255)
                                                     tgtATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTGCCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGTATGCTCCa                                    <  1:3420920/93‑1 (MQ=255)
                                                      gtATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTGCCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGTATGCTCCAg                                   >  2:6865230/1‑93 (MQ=255)
                                                      gtATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTGCCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGTATGCTCCAg                                   >  2:2453611/1‑93 (MQ=255)
                                                      gtATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTGCCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGTATGCTCCAg                                   <  2:773407/93‑1 (MQ=255)
                                                      gtATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTACCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGTATGCTCCAg                                   >  1:9250301/1‑93 (MQ=255)
                                                       tATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTGCCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGTATGCTCCAgg                                  >  1:2312030/1‑92 (MQ=255)
                                                       tATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTGCCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGTATGCTCCAGc                                  >  1:4871644/1‑93 (MQ=255)
                                                       tATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTGCCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACAGCCAGCGTATGCTCCCGc                                  >  2:2771367/1‑93 (MQ=255)
                                                        aTTTGGTTTTGGCATTTTTACGATCGGTTCGGTTGCCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGTATGCTCCAGCg                                 <  1:12448/93‑1 (MQ=255)
                                                         tttGGTTTTGGCATTTTTACGATCGGTTCGGTTGCCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGTATGCTCCAGCgg                                >  2:6598268/1‑93 (MQ=255)
                                                          ttGGTTTTGGCATTTTTACGATCGGTTCGGTTACCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGTATGCTCCAGCGGc                               >  1:6581161/1‑93 (MQ=255)
                                                             gTTTTGGCATTTTTACGATCGGTTCGGTTGCCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGTATGCTCCAGCGGCAGa                            >  1:8653951/1‑93 (MQ=255)
                                                              ttttGGCATTTTTACGATCGGTTCGGTTGCCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGTATGCTCCAGCGGCAGAt                           <  2:67551/93‑1 (MQ=255)
                                                              ttttGGCATTTTTACGATCGGGTCGGTTGCCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGTATGCTCCAGCGGCAGAt                           <  2:3179598/93‑1 (MQ=255)
                                                               tttGGCATTTTTACGATCGGTTCGGTTGCCCCAGTCAGGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGTATGCTCCAGCGGCAGATa                          <  2:2893973/93‑1 (MQ=255)
                                                               tttGGCATTTTTACGATCGGTTCGGTTGCCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGTATGCTCCAGCGGCAGATa                          <  2:1054627/93‑1 (MQ=255)
                                                               ttgggCATTTTTACGATCGGTTCGGTTGCCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGTATGCTCCAGCGGCAGATa                          <  2:8561781/90‑1 (MQ=255)
                                                                ttGGCATTTTTACGATCGGTTCGGTTGCCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGTATGCTCCAGCGGCAGATAg                         >  2:4708510/1‑93 (MQ=255)
                                                                ttGGCATTTTTACGATCGGTTCGGTTACCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGTATGCTCCAGCGGCAGATAg                         >  2:6345508/1‑93 (MQ=255)
                                                                   gCATTTTTACGATCGGTTCGGTTGCCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGTATGCTCCAGCGGCAGATAGCCa                      >  2:7071201/1‑93 (MQ=255)
                                                                    cATTTTTACGATCGGTTCGGTTGCCGCAGTCTCGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGTATGCTCCAGCGGCAGATAGCCaa                     <  1:2138768/93‑1 (MQ=255)
                                                                        tttACGATCGGTTCGGTTGCCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGTATGCTCCAGCGGCAGATAGCCAAactc                 >  2:1652304/1‑93 (MQ=255)
                                                                        tttACGATCGGTTCGGTTGCCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGTATGCTCCAGCGGCAGATAGCCAAactc                 <  1:574063/93‑1 (MQ=255)
                                                                         ttACGATCGGTTCGGTTGCCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGTATGCTCCAGCGGCAGATAGCCAAactca                <  1:2860522/93‑1 (MQ=255)
                                                                         ttACGATCGGTTCGGTTGCCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGTATGCTCCAGCGGCAGATAGCCAAactca                >  2:7919115/1‑93 (MQ=255)
                                                                           aCGATCGGTTCGGTTGCCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGTATGCTCCAGCGGCAGATAGCCAAactcact              <  2:8928370/93‑1 (MQ=255)
                                                                             gATCGGTTCGGTTGCCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGTATGCTCCAGCGGCAGATAGCCAAACTCACTcg            >  2:1723625/1‑93 (MQ=255)
                                                                              aTCGGTTCGGTTGCCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGTATGCTCCAGCGGCAGATAGCCAAACTCACTcgc           >  1:3237781/1‑93 (MQ=255)
                                                                              aTCGGTGCGGTTGCCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGTATGCTCCAGCGGCAGATAGCCAAACTCACTcgc           <  1:9029851/93‑1 (MQ=255)
                                                                              aTCGGTGCGGTTGCCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGTATGCTCCAGCGGCAGATAGCCAAACTCACTcgc           <  1:5184613/93‑1 (MQ=255)
                                                                                cggttcggttGCCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGTATGCTCCAGCGGCAGATAGCCAAACTCACTCGCgg         <  1:1814298/93‑1 (MQ=255)
                                                                                cggttcggttCCCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGTATGCTCCAGCGGCAGATAGCCAAACTCACTCGCgg         <  2:5689199/93‑1 (MQ=255)
                                                                                 ggttcggttGCCCCAGTCACGCTGAGTTGTCACGACGGCTTCGCCCACCGCCAGCGTATGCTCCAGCTGCAGATAGCCAAACTCACTCGCGGt        <  2:4516359/93‑1 (MQ=255)
                                                                                  gttcggttGCCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGTATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTg       >  1:9159903/1‑93 (MQ=255)
                                                                                  gttcggttGCCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGTATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTg       <  1:3293940/93‑1 (MQ=255)
                                                                                  gtgcggttGCCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGTATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTg       <  2:5218580/90‑1 (MQ=255)
                                                                                   ttcggttGCCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGTATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTGc      <  1:5264944/93‑1 (MQ=255)
                                                                                   ttcggttGCCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGTATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTGc      <  1:7336217/93‑1 (MQ=255)
                                                                                   ttcggttGCCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGTATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTGc      >  1:3961232/1‑93 (MQ=255)
                                                                                   ttcggttGCCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGTATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTGc      >  2:9555439/1‑93 (MQ=255)
                                                                                     cggttACCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGTATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTGCgg    <  1:55410/93‑1 (MQ=255)
                                                                                      ggttGCCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGTATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTGCggg   >  1:9425374/1‑93 (MQ=255)
                                                                                       gttGCCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGTATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTGCGGGc  <  2:3661678/93‑1 (MQ=255)
                                                                                          |                                                                                         
CGCGCGACGCTCCACTTCCGCTTTAAACGTCTCAACCCCCACGCGCTCCAGCGTGTATTTGGTTTTGGCATTTTTACGATCGGTTCGGTTACCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGTATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTGCGGGC  >  NC_000913/2887142‑2887321

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: