BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,947,112	T→C	intergenic (‑80/‑152)	b2817 ← / → argA	putative amidase/N‑acetylglutamate synthase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,947,112	0	T	C	100.0%	1977.0 / NA	601	intergenic (‑80/‑152)	b2817/argA	putative amidase/N‑acetylglutamate synthase
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (321/280); total (321/280)

Only 100 of 611 total aligned reads displayed.

GATCCTGACATGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCATAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGC  >  NC_000913/2947022‑2947201

gATCCTGACATGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACaa                                                                                         <  1:9807733/93‑1 (MQ=255)

  tCCTGACATGACTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATc                                                                                       <  2:3912281/93‑1 (MQ=255)

    cTGACATGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTg                                                                                     >  1:7586404/1‑93 (MQ=255)

      gACATGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTc                                                                                   >  1:4871138/1‑93 (MQ=255)

       aCATGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCa                                                                                  <  1:4475000/93‑1 (MQ=255)

       aCATGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCa                                                                                  <  1:9889853/93‑1 (MQ=255)

        cATGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCAt                                                                                 >  1:5518633/1‑93 (MQ=255)

        cATGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGCAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCAt                                                                                 <  2:2482999/93‑1 (MQ=255)

         aTGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATc                                                                                >  2:487945/1‑93 (MQ=255)

         aTGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATc                                                                                <  2:7045787/93‑1 (MQ=255)

         aTGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATc                                                                                <  1:9469118/93‑1 (MQ=255)

          tGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCt                                                                               >  2:2022290/1‑93 (MQ=255)

          tGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCt                                                                               >  1:6713151/1‑93 (MQ=255)

          tGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCt                                                                               >  1:6401799/1‑93 (MQ=255)

          tGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCt                                                                               >  1:8587211/1‑93 (MQ=255)

          tGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCt                                                                               >  1:2328680/1‑93 (MQ=255)

           gCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCta                                                                              >  1:8812381/1‑93 (MQ=255)

            ccTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCtaa                                                                             >  2:2277869/1‑93 (MQ=255)

             ctctCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCtaat                                                                            <  1:4095773/93‑1 (MQ=255)

              tctcCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCtaata                                                                           >  2:8064130/1‑93 (MQ=255)

               ctcCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCtaataa                                                                          <  1:2226387/93‑1 (MQ=255)

                tcCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATaaa                                                                         >  1:5030862/1‑93 (MQ=255)

                tcCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATaaa                                                                         <  2:6136051/93‑1 (MQ=255)

                  ccGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACg                                                                       <  1:2003851/93‑1 (MQ=255)

                  ccGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACg                                                                       >  2:3589079/1‑93 (MQ=255)

                   cGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACgg                                                                      >  2:4031849/1‑93 (MQ=255)

                   cGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACgg                                                                      >  1:1525903/1‑93 (MQ=255)

                   cGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACgg                                                                      >  1:1690826/1‑93 (MQ=255)

                    gAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGt                                                                     <  2:1169475/93‑1 (MQ=255)

                    gAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGt                                                                     >  1:5229943/1‑93 (MQ=255)

                    gAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGt                                                                     >  1:4695111/1‑93 (MQ=255)

                     aGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTa                                                                    >  2:9151857/1‑93 (MQ=255)

                     aGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTa                                                                    >  2:9696961/1‑93 (MQ=255)

                     aGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTa                                                                    <  2:10009222/93‑1 (MQ=255)

                       cAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTaaa                                                                  >  2:5743518/1‑93 (MQ=255)

                        aaaaGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCGCAATCTGTCATCTAATAAACGGTAAAc                                                                 >  2:7505225/1‑93 (MQ=255)

                        aaaaGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTaaat                                                                 <  1:7431155/93‑2 (MQ=255)

                          aaGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACAt                                                               <  1:387973/93‑1 (MQ=255)

                          aaGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACAt                                                               <  2:2810453/93‑1 (MQ=255)

                           aGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTATCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACAtt                                                              <  2:3061288/93‑1 (MQ=255)

                           aGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACAtt                                                              <  1:6942215/93‑1 (MQ=255)

                             aaaTCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCt                                                            >  2:6757756/1‑93 (MQ=255)

                               aTCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCttt                                                          <  1:9244016/93‑1 (MQ=255)

                                tCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCtttt                                                         >  2:4573086/1‑93 (MQ=255)

                                tCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCtttt                                                         <  2:8297434/93‑1 (MQ=255)

                                tCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCtttt                                                         <  1:1024031/93‑1 (MQ=255)

                                 cTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTTATCTAATAAACGGTAAACATTCttttt                                                        <  2:9502341/93‑1 (MQ=255)

                                 cTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCttttt                                                        <  2:1543392/93‑1 (MQ=255)

                                  tAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTta                                                       >  2:7688107/1‑93 (MQ=255)

                                   aaGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTtat                                                      <  2:7826853/93‑1 (MQ=255)

                                    aGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTtata                                                     >  1:4789192/1‑93 (MQ=255)

                                    aGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTtata                                                     <  1:7321361/93‑1 (MQ=255)

                                    aGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTtata                                                     <  1:6127120/93‑1 (MQ=255)

                                     gCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTatat                                                    >  1:7171882/1‑93 (MQ=255)

                                      cTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATAtt                                                   <  2:7174338/93‑1 (MQ=255)

                                        gtgtAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCa                                                 <  2:9822280/93‑1 (MQ=255)

                                         tgtAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCAc                                                >  2:1696391/1‑93 (MQ=255)

                                         tgtAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCAc                                                >  1:1892736/1‑93 (MQ=255)

                                          gtAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACg                                               <  2:56159/93‑1 (MQ=255)

                                           tAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACgg                                              >  1:3357926/1‑93 (MQ=255)

                                           tAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACgg                                              >  2:9340510/1‑93 (MQ=255)

                                              cAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCAt                                           <  1:3654648/93‑1 (MQ=255)

                                              cAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCAt                                           <  2:3489687/93‑1 (MQ=255)

                                                aGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTa                                         >  2:1277248/1‑93 (MQ=255)

                                                 gTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGCAAACATTCTTTTTATATTCACGGCATTAc                                        >  1:1337294/1‑93 (MQ=255)

                                                  tAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACt                                       >  2:5916537/1‑93 (MQ=255)

                                                    aaCGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGa                                     <  1:2854230/93‑1 (MQ=255)

                                                       gACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATaa                                  <  2:2975383/93‑1 (MQ=255)

                                                          tAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATaaaaa                               <  2:1860345/93‑1 (MQ=255)

                                                          tAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATaaaaa                               >  1:4401853/1‑93 (MQ=255)

                                                          tAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATaaaaa                               >  2:6647570/1‑93 (MQ=255)

                                                           aaTTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATaaaaaa                              <  2:859759/93‑1 (MQ=255)

                                                           aaTTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATaaaaaa                              <  1:2700530/93‑1 (MQ=255)

                                                            aTTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAg                             >  1:8118275/1‑93 (MQ=255)

                                                             tttGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGt                            <  2:4762247/93‑1 (MQ=255)

                                                             tttGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGt                            <  1:7664029/93‑1 (MQ=255)

                                                              ttGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTc                           <  1:5968323/93‑1 (MQ=255)

                                                              ttGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTc                           >  2:2663117/1‑93 (MQ=255)

                                                                gACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGc                         <  1:3076704/93‑1 (MQ=255)

                                                                 aCCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGct                        >  1:782998/1‑93 (MQ=255)

                                                                  ccGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGctc                       >  1:4000295/1‑93 (MQ=255)

                                                                   cgaaaaCTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGctct                      <  2:8954921/90‑1 (MQ=255)

                                                                   cGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGctct                      <  1:962253/93‑1 (MQ=255)

                                                                   cGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGctct                      >  2:9039876/1‑93 (MQ=255)

                                                                      aaaCTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGc                   >  1:9040156/1‑93 (MQ=255)

                                                                        aCTTTAGCGAAAGACGCACCATCTGTCATCTATTAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTAGCTCTCGCAt                 >  1:5359251/1‑93 (MQ=255)

                                                                         cTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATa                <  1:8315462/93‑1 (MQ=255)

                                                                          tttAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATaa               <  1:4206049/93‑1 (MQ=255)

                                                                             aGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAAt            <  2:7314530/93‑1 (MQ=255)

                                                                             aGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAAt            <  2:5118611/93‑1 (MQ=255)

                                                                              gCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAAtt           <  2:5340938/93‑1 (MQ=255)

                                                                                 aaaGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTac        >  2:6445374/1‑93 (MQ=255)

                                                                                  aaGACGCCACATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCGCGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTaca       <  1:5840484/93‑1 (MQ=255)

                                                                                  aaGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTaca       <  1:1296981/93‑1 (MQ=255)

                                                                                  aaGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTaca       <  1:3137284/93‑1 (MQ=255)

                                                                                  aaGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTaca       <  2:6327608/93‑1 (MQ=255)

                                                                                  aaGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTaca       >  2:4247092/1‑93 (MQ=255)

                                                                                  aaGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTaca       >  2:2124145/1‑93 (MQ=255)

                                                                                       gCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGc  >  2:8444679/1‑93 (MQ=255)

                                                                                       gCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGc  >  2:4418187/1‑93 (MQ=255)

GATCCTGACATGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCATAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGC  >  NC_000913/2947022‑2947201

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`