BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,971,616	A→G	L90P (CTG→CCG)	ygeD ←	putative resistance protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,971,616	0	A	G	100.0%	882.9 / NA	276	L90P (CTG→CCG)	ygeD	putative resistance protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (140/136); total (140/136)

Only 100 of 297 total aligned reads displayed.

TCGCCGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCAGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCAAAAAGAATGTAAGCA  >  NC_000913/2971527‑2971705

tCGCCGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCt                                                                                        <  1:8061968/93‑1 (MQ=255)

   ccGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCa                                                                                     <  1:8959498/93‑1 (MQ=255)

   ccGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCa                                                                                     <  1:3969197/93‑1 (MQ=255)

    cGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAg                                                                                    <  1:5289337/93‑1 (MQ=255)

     ggTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAgg                                                                                   <  2:2509878/93‑1 (MQ=255)

     ggTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAgg                                                                                   >  1:3158392/1‑93 (MQ=255)

     ggTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCAGCTTCAgg                                                                                   >  1:1141607/1‑93 (MQ=255)

      gTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGc                                                                                  >  2:2972510/1‑93 (MQ=255)

        gAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCg                                                                                <  1:5611406/93‑1 (MQ=255)

        gAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCg                                                                                >  1:88760/1‑93 (MQ=255)

        gAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCg                                                                                >  2:6101852/1‑93 (MQ=255)

        gAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCg                                                                                >  2:4154148/1‑93 (MQ=255)

           tAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTg                                                                             >  2:2797706/1‑93 (MQ=255)

           tAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTg                                                                             <  1:4262950/93‑1 (MQ=255)

                  cagcaCCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTAGCTGCGCCCATCGGCTTCAGGCCGTTGGCAAAca                                                                      >  2:5600562/1‑93 (MQ=255)

                    gcaCCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAAcatc                                                                    >  1:504005/1‑93 (MQ=255)

                    gcaCCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAAcatc                                                                    >  2:5391296/1‑93 (MQ=255)

                    gcaCCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTACGCCCAGCGGCTTCAGGCCGTGGGCAAAcatc                                                                    >  1:7290222/1‑93 (MQ=255)

                       ccAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACatcatc                                                                 <  2:5306959/93‑1 (MQ=255)

                        cAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACAtcatca                                                                <  1:7960750/93‑1 (MQ=255)

                        cAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACAtcatca                                                                <  1:9657407/93‑1 (MQ=255)

                         aaCACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCAc                                                               >  1:1689312/1‑93 (MQ=255)

                         aaCACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCAc                                                               <  2:1022181/93‑1 (MQ=255)

                         aaCACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCCGTGGCAAACATCATCAc                                                               >  1:6309981/1‑93 (MQ=255)

                          acacCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCAcc                                                              <  2:9533583/93‑1 (MQ=255)

                           cacccaccAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATGCTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCcccc                                                             <  2:2227680/93‑1 (MQ=255)

                           cacccaccAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCAccc                                                             >  2:4670630/1‑93 (MQ=255)

                             ccagccaGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGCCCGTTGGCAAACATCATCACCCgg                                                           <  2:6881590/89‑1 (MQ=255)

                              ccaccaGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGc                                                          <  1:4919999/93‑1 (MQ=255)

                              ccaccaGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGc                                                          >  2:5819777/1‑93 (MQ=255)

                               caccaGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGcc                                                         <  2:853905/93‑1 (MQ=255)

                               caccaGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGcc                                                         >  1:7123563/1‑93 (MQ=255)

                                accaGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAAAATCATCCCCCGGCCt                                                        >  1:2405957/1‑93 (MQ=255)

                                 ccaGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCtt                                                       <  2:4885547/93‑1 (MQ=255)

                                   aGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTg                                                     >  1:2699523/1‑93 (MQ=255)

                                    gCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTgg                                                    <  1:5740436/93‑1 (MQ=255)

                                      gTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCCGGCCGTTGGCAAACATCATCACCCGGCCTTTTGCg                                                  >  1:6877131/1‑93 (MQ=255)

                                       tataGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCTCCCAGCGGCTTCAGGCCGTTGGCAACCATCATCACCCGGCCTTTGTCGa                                                 >  1:1431149/1‑93 (MQ=255)

                                       tataGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGa                                                 >  2:1325347/1‑93 (MQ=255)

                                        ataGCCGAGAAACGTATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGaa                                                <  2:4219447/93‑1 (MQ=255)

                                         taGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAg                                               <  1:1189542/93‑1 (MQ=255)

                                         taGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAg                                               >  2:7073283/1‑93 (MQ=255)

                                          aGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGc                                              >  1:3650098/1‑93 (MQ=255)

                                           gCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCt                                             <  1:4459495/93‑1 (MQ=255)

                                            ccGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTa                                            <  1:2217184/93‑1 (MQ=255)

                                             cGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTAt                                           <  2:9396893/93‑1 (MQ=255)

                                              gagaAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATc                                          >  2:5985243/1‑93 (MQ=255)

                                              gagaAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATc                                          >  2:6719674/1‑93 (MQ=255)

                                               agaATCGGATTGGTGCCAAAGCAGATTCGGGCGCCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCCCCCGTCCTTTGGCGAAGCTAGcc                                         <  2:6490614/93‑1 (MQ=255)

                                               agaAACGGATTGATACCAAAGCAGATCCTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATcc                                         <  2:3417738/93‑1 (MQ=255)

                                               agaAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATcc                                         <  1:5900058/93‑1 (MQ=255)

                                                gaAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCg                                        >  2:8216065/1‑93 (MQ=255)

                                                gaAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCg                                        >  1:1606864/1‑93 (MQ=255)

                                                    cGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCAc                                    <  1:1968088/93‑1 (MQ=255)

                                                    cGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCAc                                    <  1:7916685/93‑1 (MQ=255)

                                                         tGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGcc                               <  1:5429167/93‑1 (MQ=255)

                                                          taTACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGccc                              <  1:6513944/92‑1 (MQ=255)

                                                          gATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGccc                              <  1:4795/93‑1 (MQ=255)

                                                          gATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGccc                              >  2:3493114/1‑93 (MQ=255)

                                                           agaCCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCAcccgcccg                             >  2:8936641/3‑93 (MQ=255)

                                                            tACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGa                            >  2:2114246/1‑93 (MQ=255)

                                                             aCCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGAc                           <  1:5125708/93‑1 (MQ=255)

                                                              ccAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATACGCCACCTGCCCGACa                          >  2:6627746/1‑93 (MQ=255)

                                                               cAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACaa                         >  2:370377/1‑93 (MQ=255)

                                                                aaaGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACaaa                        <  1:1058495/93‑1 (MQ=255)

                                                                aaaGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACaaa                        >  2:739567/1‑93 (MQ=255)

                                                                 aaGCAGATACTGTCTGCCCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAATCTATCCGCCACCTGCCCGACAAAc                       <  1:6951399/93‑1 (MQ=255)

                                                                 aaGCAGATACTGGCTGCGCCCAGCGGCTTCCGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATGCGCCACCTGCCCGACAGAc                       >  2:7622963/1‑93 (MQ=255)

                                                                 aaGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAAc                       >  1:3327161/1‑93 (MQ=255)

                                                                 aaGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAAc                       <  1:3948696/93‑1 (MQ=255)

                                                                 aaGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAAc                       >  2:178786/1‑93 (MQ=255)

                                                                    cAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGgc                    <  1:456150/93‑1 (MQ=255)

                                                                     aGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGgcg                   >  2:3169602/1‑93 (MQ=255)

                                                                     aGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGgcg                   <  2:7997648/93‑1 (MQ=255)

                                                                      gATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGgcgc                  >  1:8727938/1‑93 (MQ=255)

                                                                      gATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGgcgc                  >  2:4502548/1‑93 (MQ=255)

                                                                      gATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGgcgc                  >  1:8447556/1‑93 (MQ=255)

                                                                        tACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCaa                >  1:7020830/1‑93 (MQ=255)

                                                                          cgggCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCaaaa              <  2:7937546/91‑1 (MQ=255)

                                                                           tGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCataaa             >  1:6770409/1‑93 (MQ=255)

                                                                           tGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCaaaaa             <  1:7628781/93‑1 (MQ=255)

                                                                           tGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCaaaaa             <  1:9212876/93‑1 (MQ=255)

                                                                           tGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCaaaaa             <  2:9277347/93‑1 (MQ=255)

                                                                           tGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACCGCGCaaaaa             >  1:3815754/1‑93 (MQ=255)

                                                                            ggCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCCTCAACCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCaaaacg            >  2:3618980/1‑91 (MQ=255)

                                                                            ggCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCAAAAAg            >  1:945131/1‑93 (MQ=255)

                                                                            ggCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCAAAAAg            <  1:3569295/93‑1 (MQ=255)

                                                                            ggCTCCGCCCAGCGGCGTCAGGCCGTTTGCAAACATCATCCCCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCAAAAAg            <  2:7536690/93‑1 (MQ=255)

                                                                              cTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCAAAAAGaa          <  1:8550626/93‑1 (MQ=255)

                                                                              cTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCAAAAAGaa          <  2:882449/93‑1 (MQ=255)

                                                                              cTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCAAAAAGaa          >  1:8280630/1‑93 (MQ=255)

                                                                                gcgcCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCAAAAAGAATg        >  2:9621753/1‑93 (MQ=255)

                                                                                 cgcCCAGCGGCTTCAGGCCGTTGGCAAACATCATCTCCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACGAACGGCGCAAAAAGAATGt       <  1:6351516/93‑1 (MQ=255)

                                                                                 cgcCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCAAAAAGAATGt       >  2:6139971/1‑93 (MQ=255)

                                                                                 cgcCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCAAAAAGAATGt       <  2:3978682/93‑1 (MQ=255)

                                                                                  gcCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCAAAAAGAATGTa      >  2:2336504/1‑93 (MQ=255)

                                                                                  gcCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCAAAAAGAATGTa      <  1:9843168/93‑1 (MQ=255)

                                                                                   cccAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCAAAAAGAATGTaa     >  2:5347818/1‑93 (MQ=255)

                                                                                   cccAGCGCCTTCATGGCGTTGGCAAACAGCATCACCCGGCCTGTGGCTAAGCTATCCGCCACCTGCCCGACAAACGGCGCAAAAAGAATGTaa     <  1:3481032/93‑1 (MQ=255)

                                                                                     cagcggCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCAAAAAGAATGTAAGc   <  2:6303539/93‑1 (MQ=255)

TCGCCGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCAGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCAAAAAGAATGTAAGCA  >  NC_000913/2971527‑2971705

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 17 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`