BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,975,807	A→G	L372P (CTG→CCG)	lysA ←	diaminopimelate decarboxylase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,975,807	0	A	G	100.0%	1049.4 / NA	321	L372P (CTG→CCG)	lysA	diaminopimelate decarboxylase
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (171/150); total (171/150)

Only 100 of 325 total aligned reads displayed.

GCCTGACCATTATCAAACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCAGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTCCTGCTGGGTAAAGACATCGCCCGATTCA  >  NC_000913/2975717‑2975896

gcCTGACCATTATCAAACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGt                                                                                         <  1:698579/93‑1 (MQ=255)

gcCTGACCATTATCAAACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGt                                                                                         <  1:563346/93‑1 (MQ=255)

gcCTGACCATTATCAAACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGt                                                                                         >  2:8895714/1‑93 (MQ=255)

 ccTGACCATTATCAAACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTa                                                                                        >  1:950745/1‑93 (MQ=255)

 ccTGACCATTATCAAACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTa                                                                                        <  1:5558466/93‑1 (MQ=255)

  cTGACCATTATCAAACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTAc                                                                                       >  1:9418049/1‑93 (MQ=255)

   tGACCATTATCAAACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTAcc                                                                                      <  1:8694921/93‑1 (MQ=255)

    gACCATTATCAAACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCa                                                                                     >  2:2795091/1‑93 (MQ=255)

     aCCATTATCAAACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAg                                                                                    <  1:7445570/93‑1 (MQ=255)

     aCCATTATCAAACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAg                                                                                    >  2:4647856/1‑93 (MQ=255)

      ccATTATCAAACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGa                                                                                   <  1:4183551/93‑1 (MQ=255)

        aTTATCAAACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATa                                                                                 <  2:7271443/93‑1 (MQ=255)

        aTTATCAAACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATa                                                                                 >  2:489873/1‑93 (MQ=255)

         ttATCAAACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATaa                                                                                <  1:4253423/93‑1 (MQ=255)

         ttATCAAACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATaa                                                                                >  2:2915335/1‑93 (MQ=255)

         ttATCAAACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATaa                                                                                >  2:8361834/1‑93 (MQ=255)

         ttATCAAACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATaa                                                                                >  1:1377557/1‑93 (MQ=255)

          tATCAAACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAAt                                                                               <  1:7856329/93‑1 (MQ=255)

           aTCAAACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATc                                                                              <  2:8499040/93‑1 (MQ=255)

           aTCAAACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATc                                                                              >  2:9102736/1‑93 (MQ=255)

              aaaCAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCAcc                                                                           >  1:10003530/1‑93 (MQ=255)

              aaaCAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCAcc                                                                           >  2:9666206/1‑93 (MQ=255)

               aaCAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCATATAATCACCt                                                                          >  1:9731797/1‑93 (MQ=255)

               aaCAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCt                                                                          >  2:21215/1‑93 (MQ=255)

               aaCAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCt                                                                          <  1:8506737/93‑1 (MQ=255)

                aCAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTg                                                                         >  1:4391783/1‑93 (MQ=255)

                aCAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTg                                                                         >  2:6972049/1‑93 (MQ=255)

                 cAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGc                                                                        >  2:5748491/1‑93 (MQ=255)

                  aGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAGTCACCTGcc                                                                       <  2:4151763/93‑1 (MQ=255)

                  aGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGcc                                                                       <  1:3846260/93‑1 (MQ=255)

                  aGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGcc                                                                       >  2:6034777/1‑93 (MQ=255)

                   gAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCt                                                                      <  1:6525854/93‑1 (MQ=255)

                    aaCTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCtt                                                                     <  1:1180160/93‑1 (MQ=255)

                     aCTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTc                                                                    <  2:4359909/93‑1 (MQ=255)

                     aCTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTc                                                                    <  1:9189471/93‑1 (MQ=255)

                      cTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCa                                                                   >  1:602873/1‑93 (MQ=255)

                       ttCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCAc                                                                  >  2:1648722/1‑93 (MQ=255)

                        tCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACt                                                                 >  1:3295512/1‑93 (MQ=255)

                         cTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACtt                                                                <  1:838977/93‑1 (MQ=255)

                          tGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTc                                                               >  2:1528041/1‑93 (MQ=255)

                          tGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTc                                                               <  1:2334749/93‑1 (MQ=255)

                           ggTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTcc                                                              <  1:6795592/93‑1 (MQ=255)

                            gTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCg                                                             >  1:7775391/1‑93 (MQ=255)

                             tAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCgg                                                            >  2:9586151/1‑93 (MQ=255)

                              aaCAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGc                                                           <  2:7449311/93‑1 (MQ=255)

                               aCAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCa                                                          >  2:2492878/1‑93 (MQ=255)

                                cAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCaa                                                         <  1:2229768/93‑1 (MQ=255)

                                cAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCaa                                                         <  2:9259105/93‑1 (MQ=255)

                                 aGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAg                                                        <  2:5166475/93‑1 (MQ=255)

                                  gCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAgg                                                       <  1:2191600/93‑1 (MQ=255)

                                  gCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAgg                                                       >  2:3275473/1‑93 (MQ=255)

                                   cGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGgc                                                      <  1:3700232/93‑1 (MQ=255)

                                    ggACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGgcg                                                     >  1:686419/1‑93 (MQ=255)

                                     gACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGgcgc                                                    <  2:773030/93‑1 (MQ=255)

                                          cTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTTCCTTCACTTCCGGCAAGGCGCGGGtt                                               <  1:9824686/93‑1 (MQ=255)

                                           tATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGttt                                              <  2:802795/93‑1 (MQ=255)

                                            aTTGTAGTTGGATGACATTGATGCGCCATGTGCCCCTGTATCATGCGGTACCAGATAACCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTc                                             <  1:2710291/93‑1 (MQ=255)

                                            aTTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTc                                             >  2:7980281/1‑93 (MQ=255)

                                            aTTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTc                                             >  2:2330135/1‑93 (MQ=255)

                                            aTTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTc                                             >  1:7613801/1‑93 (MQ=255)

                                             ttGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCa                                            >  2:2197957/1‑93 (MQ=255)

                                                tAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACa                                         >  2:1018852/1‑93 (MQ=255)

                                                 aGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACAt                                        >  1:6241669/1‑93 (MQ=255)

                                                  gTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACAtt                                       >  2:4233575/1‑93 (MQ=255)

                                                  gTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACAtt                                       >  2:3109592/1‑93 (MQ=255)

                                                   ttGGATGGCATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACATGCCTTCACTTCCGGCAAGGCGCGGGTGTCACCAttt                                      >  1:2055440/1‑93 (MQ=255)

                                                   ttGGATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACAttt                                      <  1:3154604/93‑1 (MQ=255)

                                                     ggATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTcc                                    >  2:135492/1‑93 (MQ=255)

                                                      gATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTccc                                   >  1:5002749/1‑93 (MQ=255)

                                                      gATGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTccc                                   >  1:6664630/1‑93 (MQ=255)

                                                       aTGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTcccc                                  <  1:2674227/93‑1 (MQ=255)

                                                        tGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCCCCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTccccc                                 <  2:3936611/93‑1 (MQ=255)

                                                        tGACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTccccc                                 <  1:9064802/93‑1 (MQ=255)

                                                         gACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCt                                <  1:5576397/93‑1 (MQ=255)

                                                         gACATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCt                                <  2:2502296/93‑1 (MQ=255)

                                                          aCATTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCtt                               >  1:2396725/1‑93 (MQ=255)

                                                            aTTGATGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCCCCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTcc                             <  1:5856972/93‑1 (MQ=255)

                                                                aTGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTCctgct                         >  2:5452485/1‑93 (MQ=255)

                                                                 tGCGCCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTCctgctg                        >  2:8691972/1‑93 (MQ=255)

                                                                  gcgcCATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTCCTGCTgg                       <  1:2109957/93‑1 (MQ=255)

                                                                     ccATCTGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGGTTCAACATTTCGCCCTTCCTGCTGGGTa                    >  1:805588/1‑93 (MQ=255)

                                                                     ccATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTCCTGCTGGGTa                    >  1:4804799/1‑93 (MQ=255)

                                                                     ccATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTCCTGCTGGGTa                    >  1:4825424/1‑93 (MQ=255)

                                                                      cATATGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTCCTGCTGGGTaa                   >  2:6215523/1‑93 (MQ=255)

                                                                       atatGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTCCTGCTGGGTaaa                  >  1:1779393/1‑93 (MQ=255)

                                                                        tatGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTCCTGCTGGGTAAAg                 <  2:4927428/93‑1 (MQ=255)

                                                                        tatGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTCCTGCTGGGTAAAg                 >  2:7911220/1‑93 (MQ=255)

                                                                         atGCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTCCTGCTGGGTAAAGa                >  1:6583021/1‑93 (MQ=255)

                                                                           gCCCCTGTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTCCTGCTGGGTAAAGACa              >  2:2830234/1‑93 (MQ=255)

                                                                             cccTGTATCATGCGGTAACAGATAATCACCTGCCTACACTTCCAGCAAGGCGCGGAATACAACATTTCCCCCATCCTGCTGGGTAAAGACATc            <  1:8948825/93‑1 (MQ=255)

                                                                                 gTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTCCTGCTGGGTAAAGACATCGccc        >  2:3064837/1‑93 (MQ=255)

                                                                                 gTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTCCTGCTGGGTAAAGACATCGccc        >  1:397215/1‑93 (MQ=255)

                                                                                 gTATCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTCCTGCTGGGTAAAGACATCGccc        >  2:9446289/1‑93 (MQ=255)

                                                                                   aTCATGCGGTACCAGATAAACACCTGCCTTCCCTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTCCTGCTGGGTAAAGACATCGCCCGa      <  1:305471/93‑1 (MQ=255)

                                                                                    tCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCGACATTTCCCCCTTCCTGCTGGGTAAAGACATCGCCCGAt     >  2:5638541/1‑93 (MQ=255)

                                                                                    tCATGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTCCTGCTGGGTAAAGACATCGCCCGAt     <  1:8829832/93‑1 (MQ=255)

                                                                                      aTGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCTCCCTTCCTGCTGGGTAAAGACATCGCCCGATTc   >  1:5243052/1‑93 (MQ=255)

                                                                                      aTGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTT‑CTCCTTACTTGTGGGGAAAGACAACGCCCGAtttc  >  1:3269823/1‑91 (MQ=255)

                                                                                       tGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTCCTGCTGGGTAAAGACATCGCCCGATTca  >  2:3481937/1‑93 (MQ=255)

                                                                                       tGCGGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTCCTGCTGGGTAAAGACATCGCCCGATTca  >  1:6442767/1‑93 (MQ=255)

GCCTGACCATTATCAAACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATTGATGCGCCATATGCCCCTGTATCATGCAGTACCAGATAATCACCTGCCTTCACTTCCGGCAAGGCGCGGGTTTCAACATTTCCCCCTTCCTGCTGGGTAAAGACATCGCCCGATTCA  >  NC_000913/2975717‑2975896

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`