BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	335,882	T→C	I245T (ATC→ACC)	yahE →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	335,882	0	T	C	100.0%	1452.1 / NA	441	I245T (ATC→ACC)	yahE	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (248/193); total (248/193)

Only 100 of 463 total aligned reads displayed.

CATTATTAAGTGCCATAACGCTGGAAGCCGCATTACAACAACGCTGCCGGGAAAATATTCATCGTTTTATTCACAACATTATTTATGACATCCCTGGGAACGCAACTCAGGCAATAGAAAAAATTAAACATATTGGCTCCAGTTCCGGCTGCGACATGCTGTATGGCATGGCCGATGGTTGTG  >  NC_000913/335792‑335974

 attattAAGTGCCATAACGCTGGAAGCCGCATTACAACAACGCTGCCGGGAAAATATTCATCGTTTTATTCACAACATTATTTATGACAcccc                                                                                           <  1:7992921/93‑1 (MQ=255)

  ttattaAGTGCCATAACGCTGGAAGCCGCATTACAACAACGCTGCCGGGAAAATATTCATCGTTTTATTCACAACATTATTTATGACACCCCt                                                                                          <  2:7109650/93‑1 (MQ=255)

  ttattaAGTGCCATAACGCTGGAAGCCGCATTACAACAACGCTGCCGGGAAAATATTCATCGTTTTATTCACAACATTATTTATGACACCCCt                                                                                          >  2:9444587/1‑93 (MQ=255)

   tatgaAGTGCCATAACGCTGGAAGCCGCATTACAACAACGCTGCCGGGAAAATATTCATCGTTTTATTCACAACATTATTTATGACACCCCTg                                                                                         <  2:622798/93‑1 (MQ=255)

    attaAGTGCCATAACGCTGGAAGGCGCATTACAACAACGCTGCCGGGAAAATATTCATCGTTTTATTCACAACATTATTTATGACACCCCTgg                                                                                        >  1:8544288/1‑93 (MQ=255)

    attaAGTGCCATAACGCTGGAAGCCGCATTACAACAACGCTGCCGGGAAAATATTCATCGTTTTATTCACAACATTATTTATGACACCCCTgg                                                                                        <  1:4660710/93‑1 (MQ=255)

    attaAGTGCCATAACGCTGGAAGCCGCATTACAACAACGCTGCCGGGAAAATATTCATCGTTTTATTCACAACATTATTTATGACACCCCTgg                                                                                        <  2:5454565/93‑1 (MQ=255)

     ttaAGTGCCATAACGCTGGAAGCCGCATTACAACAACGCTGCCGGGAAAATATTCATCGTTTTATTCACAACATTATTTATGACACCCCTggg                                                                                       >  2:9734759/1‑93 (MQ=255)

      taAGTGCCATAACGCTGGAAGCCGCATTACAACAACGCTGCCGGGAAAATATTCATCGTTTTATTCACAACATTATTTATGACACCCCTGTGa                                                                                      >  1:4792979/1‑93 (MQ=255)

      taAGTGCCATAACGCTGGAAGCCGCATTACAACAACGCTGCCGGGAAAATATTCATCGTTTTATTCACAACATTATTTATGACACCCCTGGGa                                                                                      >  1:8909049/1‑93 (MQ=255)

      taAGTGCCATAACGCTGGAAGCCGCATTACAACAACGCTGCCGGGAAAATATTCATCGTTTTATTCACAACATTATTTATGACACCCCTGGGa                                                                                      >  1:1487665/1‑93 (MQ=255)

            ccATAACGCTGGAAGCCGCATTACAACAACGCTGCCGGGAAAATATTCATCGTTTTATTCACAACATTATTTATGACACCCCTGGGAACGCaa                                                                                >  2:5300879/1‑93 (MQ=255)

              aTAACGCTGGAAGCCGCATTACAACAACGCTGCCGGGAAAATATTCATCGTTTTATTCACAACATTATTTATGACACCCCTGGGAACGCAACt                                                                              <  2:8062813/93‑1 (MQ=255)

               tAACGCTGGAAGCCGCATTACAACAACGCTGCCGGGAAAATATTCATCGTTTTATTCACAACATTATTTATGACACCCCTGGGAACGCAACTc                                                                             <  2:8913899/93‑1 (MQ=255)

               tAACGCTGGAAGCCGCATTACAACAACGCTGCCGGGAAAATATTCATCGTTTTATTCACAACATTATTTATGACACCCCTGGGAACGCAACTc                                                                             >  2:5799650/1‑93 (MQ=255)

                atcacTGGAAGCCGCATTACAACAACGCTGCCGGGAAAATATTCATCGTTTTATTCACAACATTATTTATGACACCCCTGGGAACGCAACTCa                                                                            <  2:2069812/89‑1 (MQ=255)

                 aCGCTGGAAGCCGCATTACAACAACGCTGCCGGGAAAATATTCATCGTTTTATTCACAACATTATTTATGACACCCCTGGGAACGCAACTCAg                                                                           >  1:2507650/1‑93 (MQ=255)

                 aCGCTGGAAGCCGCATTACAACAACGCTGCCGGGAAAATATTCATCGTTTTATTCACAACATTATTTATGACACCCCTGGGAACGCAACTCAg                                                                           >  1:2177609/1‑93 (MQ=255)

                  cGCTGGAAGCCGCATTACAACAACGCTGCCGGGAAAATATTCATCGTTTTATTCACAACATTATTTATGACACCCCTGGGAACGCAACTCAgg                                                                          >  2:1190283/1‑93 (MQ=255)

                  cGCTGGAAGCCGCATTACAACAACGCTGCCGGGAAAATATTCATCGTTTTATTCACAACATTATTTATGACACCCCTGGGAACGCAACTCAgg                                                                          <  1:1728369/93‑1 (MQ=255)

                   gCTGGAAGCCGCATTACAACAACGCTGCCGGGAAAATATTCATCGTTTTATTCACAACATTATTTATGACACCCCTGGGAACGCAACTCAGGc                                                                         >  2:9553925/1‑93 (MQ=255)

                     tGGAAGCCGCATTACAACAACGCTGCCGGGAAAATATTCATCGTTTTATTCACAACATTATTTATGACACCCCTGGGAACGCAACTCAGGCaa                                                                       >  1:7301961/1‑93 (MQ=255)

                         aGCCGCATTACAACAACGCTGCCGGGAAAATATTCATCGTTTTATTCACAACATTATTTATGACACCCCTGGGAACGCAACTCAGGCAATAGa                                                                   <  2:3502328/93‑1 (MQ=255)

                         aGCCGCATTACAACAACGCTGCCGGGAAAATATTCATCGTTTTATTCACAACATTATTTATGACACCCCTGGGAACGCAACTCAGGCAATAGa                                                                   <  2:9087245/93‑1 (MQ=255)

                          gCCGCATTACAACAACGCTGCCGGGAAAATATTCATCGTTTTATTCACAACATTATTTATGACACCCCTGGGAACGCAACTCAGGCAATAGaa                                                                  <  2:797988/93‑1 (MQ=255)

                          gCCGCATTACAACAACGCTGCCGGGAAAATATTCATCGTTTTATTCACAACATTATTTATGACACCCCTGGGAACGCAACTCAGGCAATAGaa                                                                  >  1:8717863/1‑93 (MQ=255)

                            cGCATTACAACAACGCTGCCGGGAAAATATTCATCGTTTTATTCACAACATTATTTATGACACCCCTGGGAACGCAACTCAGGCAATAGaaaa                                                                <  2:6805005/93‑1 (MQ=255)

                             gCATTACAACAACGCTGCCGGGAAAATATTCATCGTTTTATTCACAACATTATTTATGACACCCCTGGGAACGCAACTCAGGCAATAGaaaaa                                                               <  2:6069991/93‑1 (MQ=255)

                             gCATTACAACAACGCTGCCGGGAAAATATTCATCGTTTTATTCACAACATTATTTATGACACCCCTGGGAACGCAACTCAGGCAATAGaaaaa                                                               <  2:1705007/93‑1 (MQ=255)

                              cATTACAACAACGCTGCCGGGAAAATATTCATCGTTTTATTCACAACATTATTTATGACACCCCTGGGAACGCAACTCAGGCAATAGcaaaaa                                                              >  1:9927101/1‑93 (MQ=255)

                              cATTACAACAACGCTGCCGGGAAAATATTCATCGTTTTATTCACAACATTATTTATGACACCCCTGGGAACGCAACTCAGGCAATAGaaaaaa                                                              <  1:775240/93‑1 (MQ=255)

                              cATTACAACAACGCTGCCGGGAAAATATTCATCGTTTTATTCACAACATTATTTATGACACCCCTGGGAACGCAACTCAGGCAATAGaaaaaa                                                              <  2:1629078/93‑1 (MQ=255)

                               aTTACAACAACGCTGCCGGGAAAATATTCATCGTTTTATTCACAACATTATTTATGACACCCCTGGGAACGCAACTCAGGCAATAGAAAAAAt                                                             <  1:3015128/93‑1 (MQ=255)

                                ttACAACAACGCTGCCGGGAAAATATTCATCGTTTTATTCACACCATTATTTATGACACCCCTGGGAACGCAACTCAGGCACTAGACAAAAta                                                            >  1:3514015/1‑92 (MQ=255)

                                ttACAACAACGCTGCCGGGAAAATATTCATCGTTTTATTCACAACATTATTTATGACACCCCTGGGAACGCAACTCAGGCGATAGAAAAAAtt                                                            >  1:498101/1‑93 (MQ=255)

                                ttACAACAACGCTGCCGGGAAAATATTCATCGTTTTATTCACAACATTATTTATGACACCCCTGGGAACGCAACTCAGGCAATAGAAAAAAtt                                                            >  1:6996409/1‑93 (MQ=255)

                                ttACAACAACGCTGCCGGGAAAATATTCATCGTTTTATTCACAACATTATTTATGACACCCCTGGGAACGCAACTCAGGCAATAGAAAAAAtt                                                            >  1:735591/1‑93 (MQ=255)

                                ttACAACAACGCTGCCGGGAAAATATTCATCGTTTTATTCACAACATTATTTATGACACCCCTGGGAACGCAACTCAGGCAATAGAAAAAAtt                                                            >  2:1504552/1‑93 (MQ=255)

                                 tACAACAACGCTGCCGGGAAAATATTCATCGTTTTATTCACAACATTATTTATGACACCCCTGGGAACGCAACTCAGGCAATAGAAAAAATTa                                                           >  2:2375731/1‑93 (MQ=255)

                                 tACAACAACGCTGCCGGGAAAATATTCATCGTTTTATTCACAACATTATTTATGACACCCCTGGGAACGCAACTCAGGCAATAGAAAAAATTa                                                           >  1:4337279/1‑93 (MQ=255)

                                  acaacaACGCTGCCGGGAAAATATTCATCGTTTTATTCACAACATTATTTATGACACCCCTGGGAACGCAACTCAGGCAATAGAAAAAATTaa                                                          >  1:5462547/1‑93 (MQ=255)

                                    aacaacGCTGCCGGGAAAATATTCATCGTTTTATTCACAACATTATTTATGACACCCCTGGGAACGCAACTCAGGCAATAGAAAAAATTAAAc                                                        <  1:3632639/93‑1 (MQ=255)

                                    aacaacGCTGCCGGGAAAATATTCATCGTTTTATTCACAACATTATTTATGACACCCCTGGGAACGCAACTCAGGCAATAGAAAAAATTAAAc                                                        >  2:8408256/1‑93 (MQ=255)

                                     acaacGCTGCCGGGAAAATATTCATCGTTTTATTCACAACATTATTTATGACACCCCTGGGAACGCAACTCAGGCAATAGAAAAAATTAAACa                                                       <  1:9691395/93‑1 (MQ=255)

                                     acaacGCTGCCGGGAAAATATTCATCGTTTTATTCACAACATTATTTATGACACCCCTGGGAACGCAACTCAGGCAATAGAAAAAATTAAACa                                                       >  2:3263788/1‑93 (MQ=255)

                                      caacGCTGCCGGGAAAATATTCATCGTTTTATTCACAACATTATTTATGACACCCCTGGGAACGCAACTCAGGCAATAGAAAAAATTAAACat                                                      >  2:8499332/1‑93 (MQ=255)

                                       aacGCTGCCGGGAAAATATTCATCGTTTTATTCACAACATTATTTATGACACCCCTGGGAACGCAACTCAGGCAATAGAAAAAATTAAACata                                                     <  2:3705944/93‑1 (MQ=255)

                                       aacGCTGCCGGGAAAATATTCATCGTTTTATTCACAACATTATTTATGACACCCCTGGGAACGCAACTCAGGCAATAGAAAAAATTAAACata                                                     <  1:10017348/93‑1 (MQ=255)

                                        acGCTGCCGGGAAAATATTCATCGTTTTATTCACAACATTATTTATGACACCCCTGGGAACGCAACTCAGGCAATAGAAAAAATTAAACatat                                                    <  2:7403398/93‑1 (MQ=255)

                                        acGCTGCCGGGAAAATATTCATCGTTTTATTCACAACATTATTTATGACACCCCTGGGAACGCAACTCAGGCAATAGAAAAAATTAAACatat                                                    >  1:1046544/1‑93 (MQ=255)

                                        acGCTGCCGGGAAAATATTCATCGTTTTATTCACAACATTATTTATGACACCCCTGGGAACGCAACTCAGGCAATAGAAAAAATTAAACatat                                                    <  1:3094214/93‑1 (MQ=255)

                                          gCTGCCGGGAAAATATTCATCGTTTTATTCACAACATTATTTATGACACCCCTGGGAACGCAACTCAGGCAATAGAAAAAATTAAACATATTg                                                  <  2:5971363/93‑1 (MQ=255)

                                           cTGCCGGGAAAATATTCATCGTTTTATTCACAACATTATTTATGACACCCCTGGGAACGCAACTCAGGCAATAGAAAAAATTAAACATATTgg                                                 >  2:3446684/1‑93 (MQ=255)

                                           cTGCCGGGAAAATATTCATCGTTTTATTCACAACATTATTTATGACACCCCTGGGAACGCAACTCAGGCAATAGAAAAAATTAAACATATTgg                                                 <  2:6572125/93‑1 (MQ=255)

                                                 ggAAAATATTCATCGTTTTATTCACAACATTATTTATGACACCCCTGGGAACGCAACTCAGGCAATAGAAAAAATTAAACATATTGGCTCCAg                                           >  1:4440759/1‑93 (MQ=255)

                                                  gAAAATATTCATCGTTTTATTCACAACATTATTTATGACACCCCTGGGAACGCAACTCAGGCAATAGAAAAAATTAAACATATTGGCTCCAGt                                          <  1:6059013/93‑1 (MQ=255)

                                                   aaaaTATTCATCGTTTTATTCACAACATTATTTATGACACCCCTGGGAACGCAACTCAGGCAATAGAAAAAATTAAACATATTGGCTCCAGtt                                         <  2:6742680/93‑1 (MQ=255)

                                                    aaaTATTCATCGTTTTATTCACAACATTATTTATGACACCCCTGGGAACGCAACTCAGGCAATAGAAAAAATTAAACATATTGGCTCCAGTTc                                        <  1:3882933/93‑1 (MQ=255)

                                                    aaaTATTCATCGTTTTATTCACAACATTATTTATGACACCCCTGGGAACGCAACTCAGGCAATAGAAAAAATTAAACATATTGGCTCCAGTTc                                        >  2:7502329/1‑93 (MQ=255)

                                                     aaTATTCATCGTTTTATTCACAACATTATTTATGACACCCCTGGGAACGCAACTCAGGCAATAGAAAAAATTAAACATATTGGCTCCAGtttc                                       <  2:3125061/93‑3 (MQ=255)

                                                     aaTATTCATCGTTTTATTCACAACATTATTTATGACACCCCTGGGAACGCAACTCAGGCAATAGAAAAAATTAAACATATTGGCTCCAGTTcc                                       <  1:4140534/93‑1 (MQ=255)

                                                     aaTATTCATCGTTTTATTCACAACATTATTTATGACACCCCTGGGAACGCAACTCAGGCAATAGAAAAAATTAAACATATTGGCTCCAGTTcc                                       >  1:6822370/1‑93 (MQ=255)

                                                      atatTCATCGTTTTATTCACAACATTATTTATGACCCCCCTGGGAACGCAACTCAGGCAATAGAAAAAATTAAACATATTGGCTCCAGTTCCg                                      <  1:8494392/93‑1 (MQ=255)

                                                      atatTCATCGTTTTATTCACAACATTATTTATGACACCCCTGGGAACGCAACTCAGGCAATAGAAAAAATTAAACATATTGGCTCCAGTTCCg                                      <  1:3462145/93‑1 (MQ=255)

                                                       tatTCATCGTTTTATTCACAACATTATTTATGACACCCCTGGGAACGCAACTCAGGCAATAGAAAAAATTAAACATATTGGCTCCAGTTCCgg                                     >  1:9020208/1‑93 (MQ=255)

                                                         ttCATCGTTTTATTCACAACATTATTTATGACACCCCTGGGAACGCAACTCAGGCAATAGAAAAAATTAAACATATTGGCTCCAGTTCCGGCt                                   >  1:6494928/1‑93 (MQ=255)

                                                         ttCATCGTTTTATTCACAACATTATTTATGACACCCCTGGGAACGCAACTCAGGCAATAGAAAAAATTAAACATATTGGCTCCAGTTCCGGCt                                   <  2:7264727/93‑1 (MQ=255)

                                                           cATCGTTTTATTCACAACATTATTTATGACACCCCTGGGAACGCAACTCAGGCAATAGAAAAAATTAAACATATTGGCTCCAGTTCCGGCTGc                                 <  2:187604/93‑1 (MQ=255)

                                                           cATCGTTTTATTCACAACATTATTTATGACACCCCTGGGAACGCAACTCAGGCAATAGAAAAAATTAAACATATTGGCTCCAGTTCCGGCTGc                                 >  1:6657202/1‑93 (MQ=255)

                                                            aTCGTTTTATTCACAACATTATTTATGACACCCCTGGGAACGCAACTCAGGCAATAGAAAAAATTAAACATATTGGCTCCAGTTCCGGCTGCg                                >  1:6405494/1‑93 (MQ=255)

                                                             tCGTTTTATTCACAACATTATTTATGACACCCCTGGGAACGCAACTCAGGCAATAGAAAAAATTAAACATATTGGCTCCAGTTCCGGCTGCGa                               <  1:7933439/93‑1 (MQ=255)

                                                             tCGTTTTATTCACAACATTATTTATGACACCCCTGGGAACGCAACTCAGGCAATAGAAAAAATTAAACATATTGGCTCCAGTTCCGGCTGCGa                               >  1:8638463/1‑93 (MQ=255)

                                                               gTTTTATTCACAACATTATTTATGACACCCCTGGGAACGCAACTCAGGCAATAGAAAAAATTAAACATATTGGCTCCAGTTCCGGCTGCGACa                             <  1:5779508/93‑1 (MQ=255)

                                                               gTTTTATTCACAACATTATTTATGACACCCCTGGGAACGCAACTCAGGCAATAGAAAAAATTAAACATATTGGCTCCAGTTCCGGCTGCGACa                             >  1:2770911/1‑93 (MQ=255)

                                                               gTTTTATTCACAACATTATTTATGACACCCCTGGGAACGCAACTCAGGCAATAGAAAAAATTAAACATATTGGCTCCAGTTCCGGCTGCGACa                             <  1:6947812/93‑1 (MQ=255)

                                                                ttttATTCACAACATTATTTATGACACCCCTGGGAACGCAACTCAGGCAATAGAAAAAATTAAACATATTGGCTCCAGTTCCGGCTGCGACAt                            <  1:7573208/93‑1 (MQ=255)

                                                                gtttATTCTCAACATTAGTTATGACACCCCTGGGAACGCAACTCAGGCAATAGAAAAAATTAAACATATTGGCTCCAGTTCCGGCTGCGACAt                            >  2:8969729/2‑93 (MQ=255)

                                                                 tttATTCACAACATTATTTATGACACCCCTGGGAACGCAACTCAGGCAATAGAAAAAATTAAACATATTGGCTCCAGTTCCGGCTGCGACATg                           >  2:5152671/1‑93 (MQ=255)

                                                                  ttATTCACAACATTATTTATGACACCCCTGGGAACGCAACTCAGGCAATAGAAAAAATTAAACATATTGGCTCCAGTTCCGGCTGCGACATGc                          >  1:1282275/1‑93 (MQ=255)

                                                                    aTTCACAACATTATTTATGACACCCCTGGGAACGCAACTCAGGCAATAGAAAAAATTAAACATATTGGCTCCAGTTCCGGCTGCGACATGCTg                        >  2:821948/1‑93 (MQ=255)

                                                                     ttCACAACATTATTTATGACACCCCTGGGAACGCAACTCAGGCAATAGAAAAAATTAAACATATTGGCTCCAGTTCCGGCTGCGACATGCTGt                       <  2:5656030/93‑1 (MQ=255)

                                                                     ttCACAACATTATTTATGACACCCCTGGGAACGCAACTCAGGCAATAGAAAAAATTAAACATATTGGCTCCAGTTCCGGCTGCGACATGCTGt                       >  2:2780939/1‑93 (MQ=255)

                                                                      tCACAACATTATTTATGACACCCCTGGGAACGCAACTCAGGCAATAGAAAAAATTAAACATATTGGCTCCAGTTCCGGCTGCGACATGCTGTa                      <  1:7051426/93‑1 (MQ=255)

                                                                        acaacaTTATTTATGACACCCCTGGGAACGCAACTCAGGCAATAGAAAAAATTAAACATATTGGCTCCAGTTCCGGCTGCGACATGCTGTatg                    <  2:2571689/93‑1 (MQ=255)

                                                                        acaacaTTATTTATGACACCCCTGGGAACGCAACTCAGGCAATAGAAAAAATTAAACATATTGGCTCCAGTTCCGGCTGCGACATGCTGTatg                    <  2:7745363/93‑1 (MQ=255)

                                                                        acaacaTTATTTATGACACCCCTGGGAACGCAACTCAGGCAATAGAAAAAATTAAACATATTGGCTCCAGTTCCGGCTGCGACATGCTGTatg                    >  1:8210799/1‑93 (MQ=255)

                                                                         caacaTTATTTATGACACCCCTGGGAACGCAACTCAGGCAATAGAAAAAATTAAACATATTGGCTCCAGTTCCGGCTGCGACATGCTGTatgg                   >  1:9323210/1‑93 (MQ=255)

                                                                           acaTTATTTATGACACCCCTGGGAACGCAACTCAGGCAATAGAAAAAATTAAACATATTGGCTCCAGTTCCGGCTGCGACATGCTGTatggca                 >  2:3919647/1‑93 (MQ=255)

                                                                           acaTTATTTATGACACCCCTGGGAACGCAACTCAGGCAATAGAAAAAATTAAACATATTGGCTCCAGTTCCGGCTGCGACATGCTGTatggca                 <  1:3367399/93‑1 (MQ=255)

                                                                            caTTATTTATGACACCCCTGGGAACGCAACTCAGGCAATAGAAAAAATTAAACATATTGGCTCCAGTTCCGGCTGCGACATGCTGTatggcat                <  1:7631392/93‑1 (MQ=255)

                                                                             attattTATGACACCCCTGGGAACGCAACTCAGGCAATAGAAAAAATTAAACATATTGGCTCCAGTTCCGGCTGCGACATGCTGTatggcatg               >  1:1102069/1‑93 (MQ=255)

                                                                               tatttatGACACCCCTGGGAACGCAACTCAGGCAATAGAAAAAATTAAACATATTGGCTCCAGTTCCGGCTGCGACATGCTGTatggcatggc             <  2:4894568/93‑1 (MQ=255)

                                                                               tatttatGACACCCCTGGGAACGCAACTCAGGCAATAGAAAAAATTAAACATATTGGCTCCAGTTCCGGCTGCGACATGCTGTatggcatggc             <  1:189076/93‑1 (MQ=255)

                                                                               tatttatGACACCCCTGGGAACGCAACTCAGGCAATAGAAAAAATTAAACATATTGGCTCCAGTTCCGGCTGCGACATGCTGTatggcatggc             >  1:9208537/1‑93 (MQ=255)

                                                                                 tttatGACACCCCTGGGAACGCAACTCAGGCAATAGAAAAAATTAAACATATTGGCTCCAGTTCCGGCTGCGACATGCTGTATGGCATGGCCg           >  1:5197715/1‑93 (MQ=255)

                                                                                  ttatGACACCCCTGGGAACGCAACTCAGGCAATAGAAAAAATTAAACATATTGGCTCCAGTTCCGGCTGCGACATGCTGTATGGCATGGCCGa          >  1:5609803/1‑93 (MQ=255)

                                                                                   tatGACACCCCTGGGAACGCAACTCAGGCAATAGAAAAAATTAAACATATTGGCTCCAGTTCCGGCTGCGACATGCTGTATGGCATGGCCGAt         <  2:4612014/93‑1 (MQ=255)

                                                                                   tatGACACCCCTGGGAACGCAACTCAGGCAATAGAAAAAATTAAACATATTGGCTCCAGTTCCGGCTGCGACATGCTGTATGGCATGGCCGAt         >  2:4063655/1‑93 (MQ=255)

                                                                                    atGACACCCCTGGGAACGCAACTCAGGCAATAGAAAAAATTAAACATATTGGCTCCAGTTCCGGCTGCGACATGCTGTATGGCATGGCCGATg        <  2:8773291/93‑1 (MQ=255)

                                                                                      gACACCCCTGGGAACGCAACTCAGGCAATAGAAAAAATTAAACATATTGGCTCCAGTTCCGGCTGCGACATGCTGTATGGCATGGCCGATGGt      >  2:4446968/1‑93 (MQ=255)

CATTATTAAGTGCCATAACGCTGGAAGCCGCATTACAACAACGCTGCCGGGAAAATATTCATCGTTTTATTCACAACATTATTTATGACATCCCTGGGAACGCAACTCAGGCAATAGAAAAAATTAAACATATTGGCTCCAGTTCCGGCTGCGACATGCTGTATGGCATGGCCGATGGTTGTG  >  NC_000913/335792‑335974

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`