BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,008,642	C→T	A198A (GCC→GCT)	b2873 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,008,642	0	C	T	99.7%	1177.8 / NA	323	A198A (GCC→GCT)	b2873	hypothetical protein
Reads supporting (aligned to +/- strand): ref base C (0/0); major base T (142/180); minor base G (0/1); total (142/181)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 337 total aligned reads displayed.

ATTACGCCGCTTGCATGAATCCGGCGCGCTGACCACCGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCCGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGAAGCCATCGCCCGCATGATTAACCTGGCACA  >  NC_000913/3008552‑3008731

 ttACGCCGCTTGCATGAATCCGGCGCGCTGACCACCGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCa                                                                                        >  1:1675120/1‑93 (MQ=255)

 ttACGCCGCTTGCATGAATCCGGCGCGCTGACCACCGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCa                                                                                        >  2:3764500/1‑93 (MQ=255)

  tACGCCGCTTGCATGAATCCGGCGCGCTGACCACCGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAg                                                                                       <  1:1957409/93‑1 (MQ=255)

   aCGCCGCTTGCATGAATCCGGCGCGCTGACCACCGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAgg                                                                                      <  1:5550146/93‑1 (MQ=255)

   aCGCCGCTTGCATGAATCCGGCGCGCTGACCACCGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAgg                                                                                      >  1:7812987/1‑93 (MQ=255)

   aCGCCGCTTGCATGAATCCGGCGCGCTGACCACCGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAgg                                                                                      <  2:3950068/93‑1 (MQ=255)

   aCGCCGCTTGCATGAATCCGGCGCGCTGACCACCGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAgg                                                                                      <  1:8622689/93‑1 (MQ=255)

     gccgcTTGCATGAATCCGGCGCGCTGACCACCGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGt                                                                                    >  2:1512020/1‑93 (MQ=255)

      ccgcTTGCATGAATCCGGCGCGCTGACCACCGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGtt                                                                                   <  2:6172032/93‑1 (MQ=255)

       cgcTTGCATGAATCCGGCGCGCTGACCACCGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTa                                                                                  <  2:8032079/93‑1 (MQ=255)

        gcTTGCATGAATCCGGCGCGCTGACCACCGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTaa                                                                                 >  2:9140373/1‑93 (MQ=255)

        gcTTGCATGAATCCGGCGCGCTGACCACCGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTaa                                                                                 <  1:3493592/93‑1 (MQ=255)

        gcTTGCATGAATCCGGCGCGCTGACCACCGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTaa                                                                                 <  2:2880231/93‑1 (MQ=255)

         cTTGCATGAATCCGGCGCGCTGACCACCGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAAc                                                                                <  2:1389490/93‑1 (MQ=255)

         cTTGCATGAATCCGGCGCGCTGACCACCGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAAc                                                                                <  2:2101869/93‑1 (MQ=255)

         cTTGCATGAATCCGGCGCGCTGACCACCGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAAc                                                                                <  2:2758199/93‑1 (MQ=255)

               tGAATCCGGCGCGCTGACCACCGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCGGGGTTAAccgcgcc                                                                          >  2:3262219/1‑93 (MQ=255)

               tGAATCCGGCGCGCTGACCACCGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAAccgcgcc                                                                          <  2:869773/93‑1 (MQ=255)

               tGAATCCGGCGCGCTGACCACCGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAAccgcgcc                                                                          >  1:4798771/1‑93 (MQ=255)

                      ggCGCGCTGACCACCGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTAt                                                                   >  1:3057495/1‑93 (MQ=255)

                      ggCGCGCTGACCACCGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTAt                                                                   <  1:4146278/93‑1 (MQ=255)

                       gcgcgcTGACCACCGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATc                                                                  >  2:7728892/1‑93 (MQ=255)

                       gcgcgcTGACCACCGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATc                                                                  <  2:5344944/93‑1 (MQ=255)

                       gcgcgcTGACCACCGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATc                                                                  <  1:2942576/93‑1 (MQ=255)

                        cgcgcTGACCACCGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCa                                                                 <  1:5763589/93‑1 (MQ=255)

                         gcgcTGACCACCGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCAt                                                                >  1:5015589/1‑93 (MQ=255)

                           gcTGACCACCGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGc                                                              <  2:833959/93‑1 (MQ=255)

                           gcTGACCACCGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGc                                                              >  1:2327960/1‑93 (MQ=255)

                            cTGACCACCGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGcc                                                             >  2:1253738/1‑93 (MQ=255)

                             tGACCACCGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCt                                                            >  1:4204901/1‑93 (MQ=255)

                              gACCACCGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCtt                                                           >  1:6021051/1‑93 (MQ=255)

                              gACCACCGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCtt                                                           >  2:67386/1‑93 (MQ=255)

                              gACCACCGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCtt                                                           >  1:2500536/1‑93 (MQ=255)

                              gACCACCGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATAGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCtt                                                           >  1:10026079/1‑93 (MQ=255)

                               accaccGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTg                                                          <  2:4469740/93‑1 (MQ=255)

                                ccaccGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGa                                                         <  1:4960499/93‑1 (MQ=255)

                                ccaccGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGa                                                         >  2:2333599/1‑93 (MQ=255)

                                ccaccGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGa                                                         <  1:1225651/93‑1 (MQ=255)

                                 caccGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAg                                                        >  2:3826953/1‑93 (MQ=255)

                                  cccGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGt                                                       <  2:8490075/92‑1 (MQ=255)

                                  accGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGt                                                       <  2:4722040/93‑1 (MQ=255)

                                  accGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGt                                                       >  1:3827190/1‑93 (MQ=255)

                                  accGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGt                                                       >  1:2204287/1‑93 (MQ=255)

                                   ccGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTc                                                      >  2:9478871/1‑93 (MQ=255)

                                   ccGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTc                                                      <  2:7519193/93‑1 (MQ=255)

                                     gTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGc                                                    >  2:1915854/1‑93 (MQ=255)

                                      tGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGcc                                                   <  2:8878757/93‑1 (MQ=255)

                                      tGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGcc                                                   >  2:9572306/1‑93 (MQ=255)

                                      tGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGcc                                                   >  2:738668/1‑93 (MQ=255)

                                       gCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGccc                                                  >  1:1903487/1‑93 (MQ=255)

                                        cACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCct                                                 <  2:2935836/93‑1 (MQ=255)

                                        cACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCct                                                 <  2:6021050/93‑1 (MQ=255)

                                         aCCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCctc                                                <  2:9772096/93‑1 (MQ=255)

                                          cccGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCctct                                               <  2:4403245/93‑1 (MQ=255)

                                           ccGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTg                                              >  1:6979447/1‑93 (MQ=255)

                                           ccGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTg                                              >  1:112992/1‑93 (MQ=255)

                                            cGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGAGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTgg                                             <  1:4689629/93‑1 (MQ=255)

                                              gAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGaa                                           >  2:6625838/1‑93 (MQ=255)

                                               aaaaTGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAAt                                          <  2:1780813/93‑1 (MQ=255)

                                                aaaTGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATg                                         <  2:9221822/93‑1 (MQ=255)

                                                 aaTGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGc                                        >  2:5726831/1‑93 (MQ=255)

                                                   tgatgCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGa                                      <  1:2849906/93‑1 (MQ=255)

                                                   tgatgCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGa                                      <  2:5066876/93‑1 (MQ=255)

                                                    gatgCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGaa                                     <  1:5291291/93‑1 (MQ=255)

                                                    gatgCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGaa                                     >  2:3397274/1‑93 (MQ=255)

                                                    gatgCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGATATCATGCCTTGAGTCGCCCTCTGGAATGCGaa                                     <  1:4351868/93‑1 (MQ=255)

                                                     atgCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAg                                    <  2:5636953/93‑1 (MQ=255)

                                                      tgCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGc                                   <  2:4609922/93‑1 (MQ=255)

                                                       gCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCg                                  >  1:753299/1‑93 (MQ=255)

                                                       gCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCg                                  <  1:7377369/93‑1 (MQ=255)

                                                        cGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCgg                                 >  2:6922510/1‑93 (MQ=255)

                                                         cgCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGa                                <  1:2529413/92‑1 (MQ=255)

                                                           cTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGAAg                              <  1:6139799/93‑1 (MQ=255)

                                                            tATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGAAGc                             >  1:8661974/1‑93 (MQ=255)

                                                            tATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGAAGc                             >  1:7154192/1‑93 (MQ=255)

                                                             aTCACCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGAAGcc                            >  2:1048531/1‑93 (MQ=255)

                                                              tCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGAAGCCa                           <  2:588325/93‑1 (MQ=255)

                                                              tCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGAAGCCa                           >  2:3891336/1‑93 (MQ=255)

                                                               cGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGAAGCCAt                          <  1:2685566/93‑1 (MQ=255)

                                                               cGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGAAGCCAt                          <  1:3991688/93‑1 (MQ=255)

                                                                  cAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGACGCGGGAGCCATCGc                       >  2:4355194/1‑93 (MQ=255)

                                                                  cAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGAAGCCATCGc                       >  2:5205890/1‑93 (MQ=255)

                                                                   aGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGAAGCCATCGcc                      >  2:5812093/1‑93 (MQ=255)

                                                                      aaGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGAAGCCATCGCCCGc                   >  2:9347881/1‑93 (MQ=255)

                                                                       aGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGAAGCCATCGCCCGCa                  <  1:3265975/93‑1 (MQ=255)

                                                                        gcgggcggAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGAAGCCATCGCCCGCAt                 <  2:8174638/93‑1 (MQ=255)

                                                                         cgggcggAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGAAGCCATCGCCCGCATg                >  1:7683313/1‑93 (MQ=255)

                                                                         cgggcggAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGAAGCCATCGCCCGCATg                <  1:3422857/93‑1 (MQ=255)

                                                                           ggcggAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGAAGCCATCGCCCGCATGAt              >  2:8613368/1‑93 (MQ=255)

                                                                            gcggAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGAAGCCATCGCCCGCATGAtt             <  1:9657989/93‑1 (MQ=255)

                                                                            gcggAATTTATCGCGGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGAAGCCATCGCCCGCATGAtt             <  1:9230256/93‑1 (MQ=255)

                                                                             tggAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGAAGCCATCGCCCGCATGATTa            <  2:6395630/92‑1 (MQ=255)

                                                                               gAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGAAGCCATCGCCCGCATGATTAAc          <  2:708927/93‑1 (MQ=255)

                                                                               gAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGAAGCCATCGCCCGCATGATTAAc          >  2:511889/1‑93 (MQ=255)

                                                                               gAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGAAGCCATCGCCCGCATGATTAAc          <  1:6577268/93‑1 (MQ=255)

                                                                                  tttATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGAAGCCATCGCCCGCATGATTAACCTg       >  2:7065035/1‑93 (MQ=255)

                                                                                  tttATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGAAGCCATCGCCCGCATGATTAACCTg       >  1:581813/1‑93 (MQ=255)

                                                                                  tttATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGAAGCCATCGCCCGCATGATTAACCTg       >  2:9682921/1‑93 (MQ=255)

                                                                                   ttATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGAAGCCATCGCCCGCATGATTAACCTgg      <  1:9965114/93‑1 (MQ=255)

                                                                                      tCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGAAGCCATCGCCCGCATGATTAACCTGGcac   >  2:7912359/1‑93 (MQ=255)

ATTACGCCGCTTGCATGAATCCGGCGCGCTGACCACCGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCCGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGAAGCCATCGCCCGCATGATTAACCTGGCACA  >  NC_000913/3008552‑3008731

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`