Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,064,509 T→C M229V (ATG→GTG)  b2921 ← putative transcriptional regulator LYSR‑type

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,064,5090TC99.4% 1669.3 / ‑4.5 517M229V (ATG→GTG) b2921putative transcriptional regulator LYSR‑type
Reads supporting (aligned to +/- strand):  ref base T (1/2);  new base C (197/316);  total (199/318)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 526 total aligned reads displayed.

ATTTCAGCGTTGCCGGATTCACCAGTCGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCATAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCTTCGAAGTTGGCCCGGTTCT  >  NC_000913/3064419‑3064598
                                                                                          |                                                                                         
 tttCAGCGTTGCCGGATTCACCAGTCGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACaaa                                                                                        <  2:4428616/93‑1 (MQ=255)
  ttCAGCGTTGCCGGATTCACCAGTCGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACaaaa                                                                                       <  1:8809714/93‑1 (MQ=255)
   tCAGCGTTGCCGGATTCACCAGTCGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAAc                                                                                      <  2:5803089/93‑1 (MQ=255)
   tCAGCGTTGCCGGATTCACCAGTCGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAAc                                                                                      <  2:2610690/93‑1 (MQ=255)
    cAGCGTTGCCGGATTCACCAGTCGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACt                                                                                     <  2:554361/93‑1 (MQ=255)
      gCGTTGCCGGATTCACCAGTCGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGt                                                                                   <  1:1069268/93‑1 (MQ=255)
       cGTTGCCGGATTCACCAGTCGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTa                                                                                  <  2:7962751/93‑1 (MQ=255)
       cGTTGCCGGATTCACCAGTCGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTa                                                                                  <  2:4574378/93‑1 (MQ=255)
       cGTTGCCGGATTCACCAGTCGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTa                                                                                  <  1:1986963/93‑1 (MQ=255)
        gTTGCCGGATTCACCAGTCGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAg                                                                                 <  1:9783998/93‑1 (MQ=255)
        gTTGCCGGATTCACCAGTCGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAg                                                                                 <  2:5096162/93‑1 (MQ=255)
        gTTGCCGGATTCACCAGTCGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAg                                                                                 <  1:580325/93‑1 (MQ=255)
         ttGCCGGATTCACCAGTCGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAgg                                                                                >  1:2704939/1‑93 (MQ=255)
         ttGCCGGATTCACCAGTCGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAgg                                                                                >  2:1169444/1‑93 (MQ=255)
             cGGATTCACCAGTCGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACg                                                                            >  1:4116510/1‑93 (MQ=255)
              ggATTCACCAGTCGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGa                                                                           >  2:2047362/1‑93 (MQ=255)
              ggATTCACCAGTCGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGGCCGCTCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGa                                                                           <  2:2915562/93‑1 (MQ=255)
               gATTCACCAGTCGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGat                                                                          >  1:350133/1‑93 (MQ=255)
               gATTCACCAGTCGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGat                                                                          <  1:4811581/93‑1 (MQ=255)
                 ttCACCAGTCGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGataa                                                                        >  1:6212370/1‑93 (MQ=255)
                  tCACCAGTCGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGataaa                                                                       >  2:808369/1‑93 (MQ=255)
                   cACCAGTCGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGataaat                                                                      <  2:377311/93‑1 (MQ=255)
                   cACCAGTCACCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGataaat                                                                      <  1:2021448/93‑1 (MQ=255)
                     ccAGTCGCCAGCCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGataaataa                                                                    <  2:3083754/93‑1 (MQ=255)
                      cAGTCGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAaataat                                                                   >  2:2267937/1‑93 (MQ=255)
                       aGTCGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATg                                                                  <  2:7270372/93‑1 (MQ=255)
                        gTCGCCAGGCAAAATGCGGGATCACCGTCAGAAGATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATgg                                                                 <  1:6923950/93‑1 (MQ=255)
                        gTCGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATgg                                                                 >  1:1915387/1‑93 (MQ=255)
                        gTCGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATgg                                                                 <  1:8313130/93‑1 (MQ=255)
                         tCGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGt                                                                <  1:5993582/93‑1 (MQ=255)
                          cGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCTCGATCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGtt                                                               <  1:8253185/93‑1 (MQ=255)
                          cGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGtt                                                               <  2:180340/93‑1 (MQ=255)
                          cGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGtt                                                               <  2:9131419/93‑1 (MQ=255)
                            ccAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTgg                                                             <  1:2457982/93‑1 (MQ=255)
                             cAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGa                                                            <  1:5114563/93‑1 (MQ=255)
                             cAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGa                                                            <  1:7923955/93‑1 (MQ=255)
                              aGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGAt                                                           >  1:2129382/1‑93 (MQ=255)
                               ggCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGAtt                                                          <  1:2238027/93‑1 (MQ=255)
                               ggCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGAtt                                                          >  1:10005287/1‑93 (MQ=255)
                                  aaaaTGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGAt                                                       <  2:4155655/93‑1 (MQ=255)
                                  aaaaTGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGCAGGGACGATAAATAATGGTTGGATTgcc                                                       >  2:1422942/1‑91 (MQ=255)
                                   aaaTGCGGGATAACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATc                                                      >  2:2729325/1‑93 (MQ=255)
                                     aTGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATccc                                                    >  2:4734322/1‑93 (MQ=255)
                                     aTGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATccc                                                    <  2:6341605/93‑1 (MQ=255)
                                      tGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCca                                                   >  2:6170925/1‑93 (MQ=255)
                                       gCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCcac                                                  <  1:296889/93‑1 (MQ=255)
                                         gggATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACaa                                                <  1:6729020/93‑1 (MQ=255)
                                         gggATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACaa                                                >  2:1611536/1‑93 (MQ=255)
                                         gggATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACaa                                                <  2:7054901/93‑1 (MQ=255)
                                            aTCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGt                                             <  1:3749124/93‑1 (MQ=255)
                                            aTCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGt                                             >  1:5523209/1‑93 (MQ=255)
                                            aTCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGGTGGATTGATCCCACAAGGt                                             >  1:6579013/1‑93 (MQ=255)
                                             tgaCCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTc                                            <  1:8682354/91‑1 (MQ=255)
                                             tCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTc                                            >  2:2439272/1‑93 (MQ=255)
                                             acACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCCCAAGGTc                                            <  2:3547247/92‑1 (MQ=255)
                                                ccGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCa                                         >  2:9403758/1‑93 (MQ=255)
                                                 cGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCat                                        >  2:7660295/1‑93 (MQ=255)
                                                  gTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCata                                       <  2:6017309/93‑1 (MQ=255)
                                                  gTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCata                                       <  1:1504329/93‑1 (MQ=255)
                                                  gTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCata                                       <  2:4937451/93‑1 (MQ=255)
                                                   tCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCatat                                      >  1:163758/1‑93 (MQ=255)
                                                    cAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATAtt                                     <  1:88787/93‑1 (MQ=255)
                                                     aGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTc                                    <  2:9005656/93‑1 (MQ=255)
                                                      gAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCg                                   >  2:830365/1‑93 (MQ=255)
                                                       aaaaTGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGc                                  >  1:1289329/1‑93 (MQ=255)
                                                       aaaaTGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGc                                  >  1:7399609/1‑93 (MQ=255)
                                                        aaaTGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCa                                 <  1:178379/93‑1 (MQ=255)
                                                        aaaTGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCa                                 >  2:6587845/1‑93 (MQ=255)
                                                        aaaTGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCa                                 <  2:956790/93‑1 (MQ=255)
                                                        aaaTGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCa                                 <  1:4765868/93‑1 (MQ=255)
                                                         aaTGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCat                                >  2:7808410/1‑93 (MQ=255)
                                                          aTGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCatc                               <  1:4575751/93‑1 (MQ=255)
                                                           tGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCatca                              >  1:2879036/1‑93 (MQ=255)
                                                           tGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCatca                              >  1:9364990/1‑93 (MQ=255)
                                                            gTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCatcaa                             <  2:328189/93‑1 (MQ=255)
                                                            gTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCatcaa                             >  1:9052369/1‑93 (MQ=255)
                                                             tCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCatcaat                            <  1:4166316/93‑1 (MQ=255)
                                                               cgcgCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCatcaatca                          <  1:9955555/93‑1 (MQ=255)
                                                               cgcgCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCatcaatca                          <  1:6461133/93‑1 (MQ=255)
                                                                gcgcTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCAt                         <  1:9613712/93‑1 (MQ=255)
                                                                gcgcTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCAt                         <  2:9287991/93‑1 (MQ=255)
                                                                 gggtCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCAtt                        <  1:8566123/90‑1 (MQ=255)
                                                                 cgcTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCAtt                        <  2:1061035/93‑1 (MQ=255)
                                                                  gcTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTg                       <  1:7954731/93‑1 (MQ=255)
                                                                     ccACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCtt                    >  1:4297341/1‑93 (MQ=255)
                                                                     ccACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCtt                    <  2:4024269/93‑1 (MQ=255)
                                                                     ccACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATAATTGCtt                    >  2:8751866/1‑93 (MQ=255)
                                                                       aCGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCTTCg                  >  2:9673629/1‑93 (MQ=255)
                                                                       aCGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCTTCg                  >  2:6870142/1‑93 (MQ=255)
                                                                       aCGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCTTCg                  >  1:1398385/1‑93 (MQ=255)
                                                                          gcccTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGAATATTCGCATCAATCATTTCATCGAAg               <  2:3403281/90‑1 (MQ=255)
                                                                           cgcTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCTTCGAAGt              <  2:5196231/93‑1 (MQ=255)
                                                                           cgcTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCTTCGAAGt              <  1:8016733/93‑1 (MQ=255)
                                                                            gcTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCTTCGAAGtt             <  1:3371920/93‑1 (MQ=255)
                                                                            gcTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCTTCGAAGtt             >  2:596615/1‑93 (MQ=255)
                                                                               gATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCTTCGAAGTTGGc          <  1:7617184/93‑1 (MQ=255)
                                                                                 ttttGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCTTCGAAGTTGGccc        <  2:7516205/93‑1 (MQ=255)
                                                                                 ttttGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCTTCGAAGTTGGccc        >  1:7322675/1‑93 (MQ=255)
                                                                                     ggCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCTTCGACGTTGGCCCGGtt    >  2:8382819/1‑93 (MQ=255)
                                                                                      gCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCTTCGAAGTTGGCCCGGTTc   <  1:3913758/93‑1 (MQ=255)
                                                                                          |                                                                                         
ATTTCAGCGTTGCCGGATTCACCAGTCGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCATAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCTTCGAAGTTGGCCCGGTTCT  >  NC_000913/3064419‑3064598

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: