BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,183,028	T→C	V70A (GTC→GCC)	b3042 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,183,028	0	T	C	100.0%	1551.1 / NA	477	V70A (GTC→GCC)	b3042	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (218/259); total (218/259)

Only 100 of 498 total aligned reads displayed.

ATGTGGAGAAAAAAATCCGCCAAA‑CCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCAGTACTGAGATCAAAAAGCAGCCAG  >  NC_000913/3182938‑3183117

aTGTGGAGAAAAAAATCCGCCAAA‑CCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGccc                                                                                         <  2:5031162/93‑1 (MQ=255)

aTGTGGAGAAAAAAATCCGCCAAA‑CCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGccc                                                                                         <  1:6936756/93‑1 (MQ=255)

 tgtgGAGAAAAAAATCCGCCAAA‑CCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCt                                                                                        >  2:1850797/1‑93 (MQ=255)

  gtgGAGAAAAAAATCCGCCAAA‑CCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCTg                                                                                       >  1:8053830/1‑93 (MQ=255)

  gtgGAGAAAAAAATCCGCCAAA‑CCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCTg                                                                                       >  2:8251189/1‑93 (MQ=255)

     gagaAAAAAATCCGCCAAA‑CCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCTAACGCAAGCCCTGTTa                                                                                    <  2:6709543/93‑1 (MQ=255)

        aaaaaaaTCCGCCAAA‑CCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACgg                                                                                 >  2:6950205/1‑93 (MQ=255)

         aaaaaaTCCGCCAAA‑CCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGa                                                                                >  1:8258694/1‑93 (MQ=255)

         aaaaaaTCCGCCAAA‑CCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGa                                                                                <  1:77474/93‑1 (MQ=255)

         aaaaaaCCCGCCAAA‑CCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGa                                                                                <  2:9059752/93‑1 (MQ=255)

           aaaaTCCGCCAAA‑CCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACt                                                                              <  2:9515066/93‑1 (MQ=255)

            aaaCCCGCCAAA‑CCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTc                                                                             <  2:383334/93‑1 (MQ=255)

             aaTCCGCCAAA‑CCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCg                                                                            >  1:448151/1‑93 (MQ=255)

              aTCCGCCAAC‑CCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGt                                                                           <  1:2016552/93‑1 (MQ=255)

               tCCGCCAAC‑CCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTg                                                                          <  2:6008742/93‑1 (MQ=255)

               tCCGCCAAA‑CCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTg                                                                          >  1:1173952/1‑93 (MQ=255)

               acccccAAACCCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGt                                                                           <  2:4139860/89‑1 (MQ=255)

                  gCCAAA‑CCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGaaa                                                                       <  2:8003732/93‑1 (MQ=255)

                  gCCAAA‑CCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGaaa                                                                       >  1:3013833/1‑93 (MQ=255)

                    cAAA‑CCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGaaaaa                                                                     <  1:128401/93‑1 (MQ=255)

                      aa‑CCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACt                                                                   >  1:5628034/1‑93 (MQ=255)

                       a‑CCCTACAAGCGCAGCTGGCGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTg                                                                  <  1:7510327/93‑1 (MQ=255)

                         cccTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTgg                                                                 >  1:3910972/1‑93 (MQ=255)

                          ccTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGgc                                                                <  2:1009798/93‑1 (MQ=255)

                          ccTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGgc                                                                >  1:3571129/1‑93 (MQ=255)

                            tccAAGCGCGGCTGGCGCGCCTCGCCCTTGTAAGCCGTGAAGTGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGgcgc                                                              <  2:9218222/91‑1 (MQ=255)

                            tACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGgcgc                                                              >  2:1980730/1‑93 (MQ=255)

                              cAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCgctg                                                            >  2:7886906/1‑93 (MQ=255)

                              cAAGCGCAGCTGACGCGCCTCGACCTTGTAAACCGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTTGTGAAAAACTGGCgctg                                                            <  1:2549396/93‑1 (MQ=255)

                              aaaGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCgctg                                                            <  2:2382157/92‑1 (MQ=255)

                                aGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCgctgct                                                          <  2:3478156/93‑1 (MQ=255)

                                 gcgcAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCtt                                                         >  2:8344669/1‑93 (MQ=255)

                                    cAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGaa                                                      >  2:2213234/1‑93 (MQ=255)

                                    cAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGaa                                                      >  2:8724531/1‑93 (MQ=255)

                                     aGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAAc                                                     <  1:8222963/93‑1 (MQ=255)

                                     aGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAAc                                                     >  1:533910/1‑93 (MQ=255)

                                     aGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACATCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAAc                                                     >  1:5915338/1‑93 (MQ=255)

                                      gCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACa                                                    <  1:1553603/93‑1 (MQ=255)

                                      gCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACa                                                    >  2:7109806/1‑93 (MQ=255)

                                         gACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAg                                                 <  2:5181389/93‑1 (MQ=255)

                                         gACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAg                                                 >  2:2471056/1‑93 (MQ=255)

                                             cgcCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATc                                             <  2:6276072/93‑1 (MQ=255)

                                              gcCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCa                                            <  2:5855715/93‑1 (MQ=255)

                                              gcCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCa                                            >  1:7370848/1‑93 (MQ=255)

                                                 tCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCg                                         >  1:5488778/1‑93 (MQ=255)

                                                 tCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCg                                         >  1:3440716/1‑93 (MQ=255)

                                                  cGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGa                                        <  2:8536681/93‑1 (MQ=255)

                                                    aCCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAAc                                      >  2:9823347/1‑93 (MQ=255)

                                                      cTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTg                                    <  1:3205209/93‑1 (MQ=255)

                                                      cTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTg                                    >  2:7194817/1‑93 (MQ=255)

                                                      cTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTg                                    >  2:2045380/1‑93 (MQ=255)

                                                      cTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTg                                    >  1:8909695/1‑93 (MQ=255)

                                                       ttGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTgg                                   >  1:6329646/1‑93 (MQ=255)

                                                          tAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGaaa                                <  1:8640267/93‑1 (MQ=255)

                                                           aaGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGaaaa                               <  1:40892/93‑1 (MQ=255)

                                                             gCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATc                             <  2:2639961/93‑1 (MQ=255)

                                                              ccGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCg                            <  2:4718752/93‑1 (MQ=255)

                                                                gTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCa                          <  1:3299949/93‑1 (MQ=255)

                                                                gTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCa                          <  2:771349/93‑1 (MQ=255)

                                                                gTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCa                          <  2:4041560/93‑1 (MQ=255)

                                                                 tGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCAg                         >  1:7921228/1‑93 (MQ=255)

                                                                 tGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCAg                         >  1:574676/1‑93 (MQ=255)

                                                                 tGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCAg                         >  2:9342563/1‑93 (MQ=255)

                                                                 tGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCAg                         >  2:6090318/1‑93 (MQ=255)

                                                                 tGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCAg                         >  2:3145580/1‑93 (MQ=255)

                                                                 tGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCAg                         >  1:7545245/1‑93 (MQ=255)

                                                                 ggAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCAg                         <  2:5401467/92‑1 (MQ=255)

                                                                  gAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCAGt                        <  1:9389330/93‑1 (MQ=255)

                                                                  gAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCAGt                        >  1:3737074/1‑93 (MQ=255)

                                                                   aaGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCAGTa                       <  2:9703542/93‑1 (MQ=255)

                                                                    agagTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCAGTAc                      >  1:6989572/1‑93 (MQ=255)

                                                                     gagTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCAGTACt                     >  1:4685608/1‑93 (MQ=255)

                                                                      agTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCAGTACTg                    >  1:9257909/1‑93 (MQ=255)

                                                                       gTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCAGTACTga                   <  2:566419/93‑1 (MQ=255)

                                                                        ttCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCAGTACTgag                  >  1:7129789/1‑93 (MQ=255)

                                                                        ttCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCAGTACTgag                  >  1:6145995/1‑93 (MQ=255)

                                                                         tCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCAGTACTgaga                 <  1:1731828/93‑1 (MQ=255)

                                                                         tCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCAGTACTgaga                 <  1:881831/93‑1 (MQ=255)

                                                                         tCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCAGTACTgaga                 <  1:7647261/93‑1 (MQ=255)

                                                                           gACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCAGTACTGAGATc               >  1:5152493/1‑93 (MQ=255)

                                                                           gACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCAGTACTGAGATc               <  1:8339768/93‑1 (MQ=255)

                                                                            gcGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCAGTACTGAGATCa              <  1:6553583/92‑1 (MQ=255)

                                                                            aCGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCAGTACTGAGATCa              >  1:2798953/1‑93 (MQ=255)

                                                                            aCGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCAGTACTGAGATCa              <  2:285473/93‑1 (MQ=255)

                                                                              gTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCAGTACTGAGATCaaa            >  1:10007858/1‑93 (MQ=255)

                                                                              gTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCAGTACTGAGATCaaa            >  1:4305372/1‑93 (MQ=255)

                                                                              gTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCAGTACTGAGATCaaa            >  2:1382737/1‑93 (MQ=255)

                                                                              gTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCAGTACTGAGATCaaa            >  1:9569076/1‑93 (MQ=255)

                                                                               tCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCAGTACTGAGATCaaaa           >  1:494748/1‑93 (MQ=255)

                                                                               tCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCAGTACTGAGATCaaaa           >  1:1901028/1‑93 (MQ=255)

                                                                                 cAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCAGTACTGAGATCAAAAag         >  2:7399713/1‑93 (MQ=255)

                                                                                 cAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCAGTACTGAGATCAAAAag         >  2:6526127/1‑93 (MQ=255)

                                                                                  aaaCGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCAGTACTGAGATCAAAAagc        <  1:2397591/93‑1 (MQ=255)

                                                                                  aaaCGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCAGTACTGAGATCAAAAagc        <  1:9863181/93‑1 (MQ=255)

                                                                                   aaCGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCAGTACTGAGATCAAAAagca       <  1:9149607/93‑1 (MQ=255)

                                                                                    aCGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAAAGTCAGCGAACTGGAAAATCGCAGTACTGAGATCAAAAagcag      <  2:1320038/93‑1 (MQ=255)

                                                                                      gCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCAGTACTGAGATCAAAAAGCAGcc    >  1:7194892/1‑93 (MQ=255)

                                                                                      gCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCAGTACTGAGATCAAAAAGCAGcc    <  1:2341349/93‑1 (MQ=255)

                                                                                       cAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCAGTACTGAGATCAAAAAGCAGCCa   <  2:398275/93‑1 (MQ=255)

                                                                                        aaGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCAGTACTGAGATCAAAAAGCAGCCAg  <  2:4445107/93‑1 (MQ=255)

ATGTGGAGAAAAAAATCCGCCAAA‑CCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCAGTACTGAGATCAAAAAGCAGCCAG  >  NC_000913/3182938‑3183117

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`