BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,215,655	T→C	T355A (ACT→GCT)	aer ←	Aer

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,215,655	0	T	C	99.7%	1158.0 / ‑5.1	357	T355A (ACT→GCT)	aer	Aer
Reads supporting (aligned to +/- strand): ref base T (0/1); new base C (174/182); total (174/183)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.41e-01

Only 100 of 366 total aligned reads displayed.

CTTTGCCCTGTTCGCCGGCACGCGCCGCTTCCACCGCCGCATTCAGGGCCAGAATATTGGTCTGAAACGCAATATCGTTAATCAGCGAAGTAATGGTGCCAATGCGCTGGGTACTGTCGGCGATATCGTCCATTGTCTTGATCACCGTGGTCATCGCCTCCCCACCCTGCACTGCCGCAT  >  NC_000913/3215565‑3215744

cTTTGCCCTGTTCGCCGGCACGCGCCGCTTCCACCGCCGCATTCAGGGCCAGAATATTGGTCTGAAACGCAATATCGTTAATCAGCGAAGCaa                                                                                         <  1:6085149/93‑1 (MQ=255)

 tttGCCCTGTTCGCCGGCACGCGCCGCTTCCACCGCCGCATTCAGGGCCAGAATATTGGTCTGAAACGCAATATCGTTAATCAGCGAAGCAAt                                                                                        <  2:191711/93‑1 (MQ=255)

   tGCCCTGTTCGCCGGCACGCGCCGCTTCCACCGCCGCATTCAGGGCCAGAATATTGGTCTGAAACGCAATATCGTTAATCAGCGAAGCAATgg                                                                                      <  2:5641025/93‑1 (MQ=255)

   tGCCCTGTTCGCCGGCACGCGCCGCTTCCACCGCCGCATTCAGGGCCAGAATATTGGTCTGAAACGCAATATCGTTAATCAGCGAAGCAATgg                                                                                      >  2:6328401/1‑93 (MQ=255)

   tGCCCTGTTAGCCGGCACGCGCCGCTTCCACCGCCGCATTCAGGGCCAGAATATTGGTCTGAAACGCAATATCGTTAATCAGCGAAGCAATgg                                                                                      <  2:7694587/93‑1 (MQ=255)

       cTGTTCGCCGGCACGCGCCGCTTCCACCGCCGCATTCAGGGCCAGAATATTGGTCTGAAACGCAATATCGTTAATCAGCGAAGCAATGGTGcc                                                                                  >  2:2101211/1‑93 (MQ=255)

       cTGTTCGCCGGCACGCGCCGCTTCCACCGCCGCATTCAGGGCCAGAATATTGGTCTGAAACGCAATATCGTTAATCAGCGAAGCAATGGTGcc                                                                                  >  2:7975299/1‑93 (MQ=255)

        tGTTCGCCGGCACGCGCCGCTTCCACCGCCGCATTCAGGGCCAGAATATTGGTCTGAAACGCAATATCGTTAATCAGCGAAGCAATGGTGCCa                                                                                 >  1:9513641/1‑93 (MQ=255)

        tGTTCGCCGGCACGCGCCGCTTCCACCGCCGCATTCAGGGCCAGAATATTGGTCTGAAACGCAATATCGTTAATCAGCGAAGCAATGGTGCCa                                                                                 >  1:8063532/1‑93 (MQ=255)

         gtccGCCGGCACGCGCCGCTTCCACCGCCGCATTCAGGGCCAGAATATTGGTCTGAAACGCAATATCGTTAATCAGCGAAGCAATGGTGCCaa                                                                                <  1:5011434/90‑1 (MQ=255)

         gTTCGCCGGCACGCGCCGCTTCCACCGCCGCATTCAGGGCCAGAATATTGGTCTGAAACGCAATATCGTTAATCAGCGAAGCAATGGTGCCaa                                                                                <  1:8503347/93‑1 (MQ=255)

         gTTCGCCGGCACGCGCCGCTTCCACCGCCGCATTCAGGGCCAGAATATTGGTCTGAAACGCAATATCGTTAATCAGCGAAGCAATGGTGCCaa                                                                                >  2:3696600/1‑93 (MQ=255)

         gTTCGCCGGCACGCGCCGCTTCCACCGCCGCATTCAGGGCCAGAATATTGGTCTGAAACGCAATATCGTTAATCAGCGAAGCAATGGTGCCaa                                                                                <  1:9787284/93‑1 (MQ=255)

         gTTCGCCGGCACGCGCCGCTTCCACCGCCGCATTCAGGGCCAGAATATTGGTCTGAAACGCAATATCGTTAATCAGCGAAGCAATGGTGCCaa                                                                                >  1:8402138/1‑93 (MQ=255)

          ttCGCCGGCACGCGCCGCTTCCACCGCCGCATTCAGGGCCAGAATATTGGTCTGAAACGCAATATCGTTAATCAGCGAAGCAATGGTGCCAAt                                                                               <  1:1765534/93‑1 (MQ=255)

            cGCCGGCACGCGCCGCTTCCACCGCCGCATTCAGGGCCAGAATATTGGTCTGAAACGCAATATCGTTAATCAGCGAAGCAATGGTGCCAATgc                                                                             >  1:5348491/1‑93 (MQ=255)

             gCCGGCACGCGCCGCTTCCACCGCCGCATTCAGGGCAAGAATATTGGTCTGAAACGCAATATCGTTAATCAGCGAAGCAATGGTGCCAATgcg                                                                            <  2:8902030/93‑1 (MQ=255)

              ccGGCACGCGCCGCTTCCACCGCCGCATTCAGGGCCAGAATATTGGTCTGAAACGCAATATCGTTAATCAGCGAAGCAATGGTGCCAATgcgc                                                                           <  1:2874647/93‑1 (MQ=255)

               cGGCACGCGCCGCTTCCACCGCCGCATTCAGGGCCAGAATATTGGTCTGAAACGCAATATCGTTAATCAGCGAAGCAATGGTGCCAATGCGCt                                                                          <  1:2404502/93‑1 (MQ=255)

               cGGCACGCGCCGCTTCCACCGCCGCATTCAGGGCCAGAATATTGGTCTGAAACGCAATATCGTTAATCAGCGAAGCAATGGTGCCAATGCGCt                                                                          >  1:675644/1‑93 (MQ=255)

                 gcccgcgCCGCTTCCACCGCCGCATTCAGGGCCAGAATATTGGTCTGAAACGCAATATCGTTAATCAGCGAAGCAATGGTGCCAATGCGCTgg                                                                        <  2:3922043/90‑1 (MQ=255)

                 gCACGCGCCGCTTCCCCCGCCGCATTCAGGGCCAGAATATTGGTCTGAAACGCAATATCGTTAATCAGCGAAGCAATGGTGCCAATGCGCTgg                                                                        <  2:840382/93‑1 (MQ=255)

                 gCACGCGCCGCTTCCACCGCCGCATTCAGGGCCAGAATATTGGTCTGAAACGCAATATCGTTAATCAGCGAAGCAATGGTGCCAATGCGCTgg                                                                        <  2:1280977/93‑1 (MQ=255)

                   aCGCGCCGCTTCCACCGCCGCATTCAGGGCCAGAATATTGGTCTGAAACGCAATATCGTTAATCAGCGAAGCAATGGTGCCAATGCGCTGGGt                                                                      >  1:1940003/1‑93 (MQ=255)

                    cgcgCCGCTTCCACCGCCGCATTCAGGGCCAGAATATTGGTCTGAAACGCAATATCGTTAATCAGCGAAGCAATGGTGCCAATGCGCTGGGTa                                                                     <  1:447367/93‑1 (MQ=255)

                     gcgcCGCTTCCACCGCCGCATTCAGGGCCAGAATATTGGTCTGAAACGCAATATCGTTAATCAGCGAAGCAATGGTGCCAATGCGCTGGGTAc                                                                    <  1:8277707/93‑1 (MQ=255)

                     gcgcCGCTTCCACCGCCGCATTCAGGGCCAGAATATTGGTCTGAAACGCAATATCGTTAATCAGCGAAGCAATGGTGCCAATGCGCTGGGTAc                                                                    >  2:1348021/1‑93 (MQ=255)

                     gcgcCGCTTCCACCGCCGCATTCAGGGCCAGAATATTGGTCTGAAACGCAATATCGTTAATCAGCGAAGCAATGGTGCCAATGCGCTGGGCAc                                                                    >  2:343625/1‑93 (MQ=255)

                       gccgcTTCCACCGCCGCATTCAGGGCCAGAATATTGGTCTGAAACGCAATATCGTTAATCAGCGAAGCAATGGTGCCAATGCGCTGGGTACTg                                                                  >  2:2509196/1‑93 (MQ=255)

                        ccgcTTCCACCGCCGCATTCAGGGCCAGAATATTGGTCTGAAACGCAATATCGTTAATCAGCGAAGCAATGGTGCCAATGCGCTGGGTACTGt                                                                 <  2:7234793/93‑1 (MQ=255)

                         cggttCCACCGCCGCATTCAGGGCCAGAATATTGGTCTGAAACGCAATATCGTTAATCAGCGAAGCAATGGTGCCAATGCGCTGGGTACTGTc                                                                <  1:1464523/90‑1 (MQ=255)

                         cgcTTCCACCGCCGCATTCAGGGCCAGAATATTGGTCTGAAACGCAATATCGTTAATCAGCGAAGCAATGGTGCCAATGCGCTGGGTACTGTc                                                                <  2:8540778/93‑1 (MQ=255)

                          gcTTCCACCGCCGCATTCAGGGCCAGAATATTGGTCTGAAACGCAATATCGTTAATCAGCGAAGCAATGGTGCCAATGCGCTGGGTACTGTCg                                                               <  1:3247111/93‑1 (MQ=255)

                            ttCCACCGCCGCATTCAGGGCCAGAATATTGGTCTGAAACGCAATATCGTTAATCAGCGAAGCAATGGTGCCAATGCGCTGGGTACTGTCggg                                                             >  2:2209539/1‑92 (MQ=255)

                             tCCACCGCCGCATTCAGGGCCAGAATATTGGTCTGAAACGCAATATCGTTAATCAGCGAAGCAATGGTGCCAATGCGCTGGGTACTGTCGGCg                                                            >  1:3718698/1‑93 (MQ=255)

                              ccACCGCCGCATTCAGGGCCAGAATATTGGTCTGAAACGCAATATCGTTAATCAGCGAAGCAATGGTGCCAATGCGCTGGGTACTGTCGGCGa                                                           <  1:6465140/93‑1 (MQ=255)

                               cACCGCCGCATTCAGGGCCAGAATATTGGTCTGAAACGCAATATCGTTAATCAGCGAAGCAATGGTGCCAATGCGCTGGGTACTGTCGGCGat                                                          <  1:9197085/93‑1 (MQ=255)

                               cACCGCCGCATTCAGGGCCAGAATATTGGTCTGAAACGCAATATCGTTAATCAGCGAAGCAATGGTGCCAATGCGCTGGGTACTGTCGGCGat                                                          <  2:7076830/93‑1 (MQ=255)

                               cACCGCCGCATTCAGGGCCAGAATATTGGTCTGAAACGCAATATCGTTAATCAGCGAAGCAATGGTGCCAATGCGCTGGGTACTGTCGGCGat                                                          >  2:9866540/1‑93 (MQ=255)

                                aCCGCCACATTCAGGGCCAGAATATTGGTCTGAAACGCAATATCGTTAATCAGCGAAGCAATGGTGCCAATGCGCTGGGTACTGTCGGCGata                                                         <  1:8885144/93‑1 (MQ=255)

                                 ccgccgCATTCAGGGCCAGAATATTGGTCTGAAACGCAATATCGTTAATCAGCGAAGCAATGGTGCCAATGCGCTGGGTACTGTCGGCGatat                                                        <  1:2217889/93‑1 (MQ=255)

                                   gccgcATTCAGGGCCAGAATATTGGTCTGAAACGCAATATCGTTAATCAGCGAAGCAATGGTGCCAATGCGCTGGGTACTGTCGGCGATATCg                                                      <  2:523780/93‑1 (MQ=255)

                                     cgcATTCAGGGCCAGAATATTGGTCTGAAACGCAATATCGTTAATCAGCGAAGCAATGGTGCCAATGCGCTGGGTACTGTCGGCGATATCGTc                                                    <  1:7325824/93‑1 (MQ=255)

                                     cgcATTCAGGGCCAGAATATTGGTCTGAAACGCAATATCGTTAATCAGCGAAGCAATGGTGCCAATGCGCTGGGTACTGTCGGCGATATCGTc                                                    <  2:6593269/93‑1 (MQ=255)

                                      gcATTCAGGGCCAGAATATTGGTCTGAAACGCAATATCGTTAATCAGCGAAGCAATGGTGCCAATGCGCTGGGTACTGTCGGCGATATCGTcc                                                   >  2:1067927/1‑93 (MQ=255)

                                       cATTCAGGGCCAGAATATTGGTCTGAAACGCAATATCGTTAATCAGCGAAGCAATGGTGCCAATGCGCTGGGTACTGTCGGCGATATCGTCCa                                                  <  1:1139916/93‑1 (MQ=255)

                                       cATTCAGGGCCAGAATATTGGTCTGAAACGCAATATCGTTAATCAGCGAAGCAATGGTGCCAATGCGCTGGGTACTGTCGGCGATATCGTCCa                                                  >  1:3598608/1‑93 (MQ=255)

                                        aTTCAGGGCCAGAATATTGGTCTGAAACGCAATATCGTTAATCAGCGAAGCAATGGTGCCAATGCGCTGGGTACTGTCGGCGATATCGTCCAt                                                 >  2:1653889/1‑93 (MQ=255)

                                         ttCAGGGCCAGAATATTGGTCTGAAACGCAATATCGTTAATCAGCGAAGCAATGGTGCCAATGCGCTGGGTACTGTCGGCGATATCGTCCAtt                                                <  1:6513334/93‑1 (MQ=255)

                                         ttCAGGGCCAGAATATTGGTCTGAAACGCAATATCGTTAATCAGCGAAGCAATGGTGCCAATGCGCTGGGTACTGTCGGCGATATCGTCCAtt                                                >  2:2890142/1‑93 (MQ=255)

                                           cAGGGCCAGAATATTGGTCAGAATCGCAATATCTTTAATCAGCGAAGCAATGGTGCCAATGCGCTGGGTACTGTCGGCGATATCGTCCATTGt                                              <  2:7479862/93‑1 (MQ=255)

                                            aGGGCCAGAATATTGGTCTGAAACGCAATATCGTTAATCAGCGAAGCAATGGTGCCAATGCGCTGGGTACTGTCGGCGATATCGTCCATTGTc                                             >  1:818441/1‑93 (MQ=255)

                                             gggCCAGAATATTGGTCTGAAACGCAATATCGTTAATCAGCGAAGCAATGGTGCCAATGCGCTGGGTACTGTCGGCGATATCGTCCATTGTCt                                            <  1:2568887/93‑1 (MQ=255)

                                             gggCCAGAATATTGGTCTGAAACGCAATATCGTTAATCAGCGAAGCAATGGTGCCAATGCGCTGGGTACTGTCGGCGATATCGTCCATTGTCt                                            >  1:5929567/1‑93 (MQ=255)

                                              ggCCAGAATATTGGTCTGAAACGCAATAGCGTTAATCAGCGAAGCAATGGTGCCAATGCGCTGGGTACTGTCGGCGATATCGTCCATTGTCtt                                           <  2:3858648/93‑1 (MQ=255)

                                                ccAGAATATTGGTCTGAAACGCAATATCGTTAATCAGCGAAGCAATGGTGCCAATGCGCTGGGTACTGTCGGCGATATCGTCCATTGTCTTGa                                         <  1:4142845/93‑1 (MQ=255)

                                                 cAGAATATTGGTCTGAAACGCAATATCGTTAATCAGCGAAGCAATGGTGCCAATGCGCTGGGTACTGTCGGCGATATCGTCCATTGTCTTGAt                                        <  2:1814182/93‑1 (MQ=255)

                                                 cAGAATATTGGTCTGAAACGCAATATCGATAATCAGCGAAGCAATGGTGCCAATGCGCTGGGTACTGTCGGCGATATCGTCCATTGTCTTGAt                                        >  2:9160400/1‑93 (MQ=255)

                                                  aGAATATTGGTCTGAAACGCAATATCGTTAATCAGCGAAGCAATGGTGCCAATGCGCTGGGTACTGTCGGCGATATCGTCCATTGTCTTGATc                                       <  2:6127032/93‑1 (MQ=255)

                                                   gAATATTGGTCTGAAACGCAATATCGTTAATCAGCGAAGCAATGGTGCCAATGCGCTGGGTACTGTCGGCGATATCGTCCATTGTCTTGATCa                                      >  2:8279438/1‑93 (MQ=255)

                                                   gAATATTGGTCTGAAACGCAATATCGTTAATCAGCGAAGCAATGGTGCCAATGCGCTGGGTACTGTCGGCGATATCGTCCATTGTCTTGATCa                                      >  1:9291553/1‑93 (MQ=255)

                                                   gAATATTGGTCTGAAACGCAATATCGTTAATCAGCGAAGCAATGGTGCCAATGCGCTGGGTACTGTCGGCGATATCGTCCATTGTCTTGATCa                                      >  2:9768763/1‑93 (MQ=255)

                                                   gAATATTGGTCTGAAACGCAATATCGTTAATCAGCGAAGCAATGGTGCCAATGCGCTGGGTACTGTCGGCGATATCGTCCATTGTCTTGATCa                                      >  1:9890494/1‑93 (MQ=255)

                                                    aaTATTGGTCTGAAACGCAATATCGTTAATCAGCGAAGCAATGGTGCCAATGCGCTGGGTACTGTCGGCGATATCGTCCATTGTCTTGATCAc                                     >  2:8174563/1‑93 (MQ=255)

                                                      tatTGGTCTGAAACGCAATATCGTTAATCAGCGAAGCAATGGTGCCAATGCGCTGGGTACTGTCGGCGATATCGTCCATTGTCTTGATCACCg                                   <  2:5319688/93‑1 (MQ=255)

                                                       atTGGTCTGAAACGCAATATCGTTAATCAGCGAAGCAATGGTGCCAATGCGCTGGGTACTGTCGGCGATATCGTCCATTGTCTTGATCACCGt                                  <  1:2138555/93‑1 (MQ=255)

                                                       atTGGTCTGAAACGCAATATCGTTAATCAGCGAAGCAATGGTGCCAATGCGCTGGGTACTGTCGGCGATATCGTCCATTGTCTTGATCACCGt                                  >  1:1844931/1‑93 (MQ=255)

                                                        ttGGTCTGAAACGCAATATCGTTAATCAGCGAAGCAATGGTGCCAATGCGCTGGGTACTGTCGGCGATATCGTCCATTGTCTTGATCACCGTg                                 <  2:693278/93‑1 (MQ=255)

                                                          ggTCTGAAACGCAATATCGTTAATCAGCGAAGCAATGGTGCCAATGCGCTGGGTACTGTCGGCGATATCGTCCATTGTCTTGATCACCgctgt                               >  2:5125294/1‑89 (MQ=255)

                                                          ggTCTGAAACGCAATATCGTTAATCAGCGAAGCAATGGTGCCAATGCGCTGGGTACTGTCGGCGATATCGTCCATTGTCTTGATCACCGTGGt                               >  2:3304624/1‑93 (MQ=255)

                                                            tCTGAAACGCAATATCGTTAATCAGCGAAGCAATGGTGCCAATGCGCTGGGTACTGTCGGCGATATCGTCCATTGTCTTGATCACCGTGGTCa                             <  2:3060194/93‑1 (MQ=255)

                                                             cTGAAACGCAATATCGTTAATCAGCGAAGCAATGGTGCCAATGCGCTGGGTACTGTCGGCGATATCGTCCATTGTCTTGATCACCGTggggat                            >  1:7637773/1‑89 (MQ=255)

                                                              tGAAACGCAATATCGTTAATCAGCGAAGCAATGGTGCCAATGCGCTGGGTATTGTCGGCGATATCGTGCATTGTCTTGATCACCGTGGTCATc                           <  2:2138359/93‑1 (MQ=255)

                                                              tGAAACGCAATATCGTTAATCAGCGAAGCAATGGTGCCAATGCGCTGGGTACTGTCGGCGATATCGTCCTTTGTCTTGATCACCGTGgtcgtc                           >  2:7306715/1‑93 (MQ=255)

                                                              tGAAACGCAATATCGTTAATCAGCGAAGCAATGGTGCCAATGCGCTGGGTACTGTCGGCGATATCGTCCATTGTCTTGATCACCGTGGGCATc                           >  2:9231123/1‑93 (MQ=255)

                                                                gaaCGCAATATCGTTAATCAGCGAAGCAATGGTGCCAATGCGCTGGGTACTGTCGGCGATATCGTCCATTGTCTTGATCACCGTGGTCATCGc                         <  1:1550663/92‑1 (MQ=255)

                                                                aaaCGCAATATCGTTAATCAGCGAAGCAATGGTGCCAATGCGCTGGGTACTGTCGGCGATATCGTCCATTGTCTTGATCACCGTGGTCATCGc                         >  2:4990530/1‑93 (MQ=255)

                                                                  aCGCAATATCGTTAATCAGCGAAGCAATGGTGCCAATGCGCTGGGTACTGTCGGCGATATCGTCCATTGTCTTGATCACCGTGGTCATCGCCt                       >  2:4427833/1‑93 (MQ=255)

                                                                    gCAATATCGTTAATCAGCGAAGCAATGGTGCCAATGCGCTGGGTACTGTCGGCGATATCGTCCATTGTCTTGATCACCGTGGTCATCGCCTcc                     >  2:6780879/1‑93 (MQ=255)

                                                                    gCAATATCGTTAATCAGCGAAGCAATGGTGCCAATGCGCTGGGTACTGTCGGCGATATCGTCCATTGTCTTGATCACCGTGGTCATCGCCTcc                     <  2:4349271/93‑1 (MQ=255)

                                                                       atatCGTTAATCAGCGAAGCAATGGTGCCAATGCGCTGGGTACTGTCGGCGATATCGTCCATTGTCTTGATCACCGTGGTCATCGCCTCCCCa                  <  1:4288161/93‑1 (MQ=255)

                                                                       atatCGTTAATCAGCGAAGCAATGGTGCCAATGCGCTGGGTACTGTCGGCGATATCGTCCATTGTCTTGATCACCGTGGTCATCGCCTCCCCa                  >  1:6353436/1‑93 (MQ=255)

                                                                        tatCGTTAATCAGCGAAGCAATGGTGCCAATGCGCTGGGTACTGTCGGCGATATCGTCCATTGTCTTGATCACCGTGGTCATCGCCTCCCCAc                 >  2:9436609/1‑93 (MQ=255)

                                                                        tatCGTTAATCAGCGAAGCAATGGTGCCAATGCGCTGGGTACTGTCGGCGATATCGTCCATTGTCTTGATCACCGTGGTCATCGCCTCCCCAc                 >  1:7938349/1‑93 (MQ=255)

                                                                         atCGTTAATCAGCGAAGCAATGGTGCCAATGCGCTGGGTACTGTCGGCGATATCGTCCATTGTCTTGATCACCGTGGTCATCGCCTCCCCAcc                <  2:1525316/93‑1 (MQ=255)

                                                                          tCGTTAATCAGCGAAGCAATGGTGCCAATGCGCTGGGTACTGTCGGCGATATCGTCCATTGTCTTGATCACCGTGGTCATCGCCTCCCCAccc               >  2:5386320/1‑93 (MQ=255)

                                                                          tCGTTAATCAGCGAAGCAATGGTGCCAATGCGCTGGGTACTGTCGGCGATATCGTCCATTGTCTTGATCACCGTGGTCATCGCCTCCCCAccc               <  1:1058344/93‑1 (MQ=255)

                                                                          tCGTTAATCAGCGAAGCAATGGTGCCAATGCGCTGGGTACTGTCGGCGATATCGTCCATTGTCTTGATCACCGTGGTCATCGCCTCCCCAccc               <  1:6932245/93‑1 (MQ=255)

                                                                             ttAATCAGCGAAGCAATGGTGCCAATGCGCTGGGTACTGTCGGCGATATCGTCCATTGTCTTGATCACCGTGGTCATCGCCTCCCCACCCTGc            >  1:5205102/1‑93 (MQ=255)

                                                                             ttAATCAGCGAAGCAATGGTGCCAATGCGCTGGGTACTGTCGGCGATATCGTCCATTGTCTTGATCACCGTGGTCATCGCCTCCCCACCCTGc            >  1:5638253/1‑93 (MQ=255)

                                                                             ttAATCAGCGAAGCAATGGTGCCAATGCGCTGGGTACTGTCGGCGATATCGTCCATTGTCTTGATCACCGTGGTCATCGCCCCCCCACCCTGc            <  1:7520909/93‑1 (MQ=255)

                                                                                aTCAGCGAAGCAATGGTGCCAATGCGCTGGGTACTGTCGGCGATATCGTCCATTGTCTTGATCACCGTGGTCATCGCCTCCCCACCCTGCACt         <  1:1320202/93‑1 (MQ=255)

                                                                                aTCAGCGAAGCAATGGTGCCAATGCGCTGGGTACTGTCGGCGATATCGTCCATTGTCTTGATCACCGTGGTCATCGCCTCCCCACCCTGCACt         <  1:8666595/93‑1 (MQ=255)

                                                                                 tCAGCGAAGCAATGGTGCCAATGCGCTGGGTACTGTCGGCGATATCGTCCATTGTCTTGATCACCGTGGTCATCGCCTCCCCACCCTGCACTg        <  1:9678359/93‑1 (MQ=255)

                                                                                  cAGCGAAGCAATGGTGCCAATGCGCTGGGTACTGTCGGCGATATCGTCCATTGTCTTGATCACCGTGGTCATCGCCTCCCCACCCTGCACTGc       >  1:5179550/1‑93 (MQ=255)

                                                                                   aGCGAAGCAATGGTGCCAATGCGCTGGGTACTGTCGGCGATATCGTCCATTGTCTTGATCACCGTGGTCATCGCCTCCCCACCCTGCACTGcc      >  2:4158277/1‑93 (MQ=255)

                                                                                   aGCGAAGCAATGGTGCCAATGCGCTGGGTACTGTCGGCGATATCGTCCATTGTCTTGATCACCGTGGTCATCGCCTCCCCACCCTGCACTGcc      <  2:5083182/93‑1 (MQ=255)

                                                                                      gAAGCAATGGTGCCAATGCGCTGGGTACTGTCGGCGATATCGTCCATTGTCTTGATCACCGTGGTCATCGCCTCCCCACCCTGCACTGCCGCa   <  2:1402000/93‑1 (MQ=255)

                                                                                       aaGCAATGGTGCCAATGCGCTGGGTACTGTCGGCGATATCGTCCATTGTCTTGATCACCGTGGTCATCGCCTCCCCACCCTGCACTGCCGCAt  >  1:7167397/1‑93 (MQ=255)

                                                                                       aaGCAATGGTGCCAATGCGCTGGGTACTGTCGGCGATATCGTCCATTGTCTTGATCACCGTGGTCATCGCCTCCCCACCCTGAACTGCCGCAt  >  1:8112307/1‑93 (MQ=255)

CTTTGCCCTGTTCGCCGGCACGCGCCGCTTCCACCGCCGCATTCAGGGCCAGAATATTGGTCTGAAACGCAATATCGTTAATCAGCGAAGTAATGGTGCCAATGCGCTGGGTACTGTCGGCGATATCGTCCATTGTCTTGATCACCGTGGTCATCGCCTCCCCACCCTGCACTGCCGCAT  >  NC_000913/3215565‑3215744

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`