BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,251,140	G→C	L239V (CTT→GTT)	yhaJ ←	putative transcriptional regulator LYSR‑type

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,251,140	0	G	C	100.0%	770.6 / NA	240	L239V (CTT→GTT)	yhaJ	putative transcriptional regulator LYSR‑type
Reads supporting (aligned to +/- strand): ref base G (0/0); new base C (139/101); total (139/101)

Only 100 of 264 total aligned reads displayed.

TCTCGCTGGTCGATTCCGGGCTGACGACACGCAACCGCCCTTCCGCAATATCTTTTTCGACCATAGGATACGGCATCGTCGCCACGCCAAGCCCCGCCAGTAATGCCTGACGTTTATCTTCAATCGTGCTCACCGTTAAGCGCGGCTGTTTGTCCAGCAGCTGTACGGTCAACACCGGGC  >  NC_000913/3251050‑3251229

tctcGCTGGTCGATTCCGGGCTGACGACACGCAACCGCCCTTCCGCAATATCTTTTTCGACCATAGGATACGGCATCGTCGCCACGCCAAccc                                                                                         >  2:4909212/1‑93 (MQ=255)

    gCTGGTCGATTCCGGGCTGACGACACGCAACCGCCCTTCCGCAATATCTTTTTCGACCATAGGATACGGCATCGTCGCCACGCCAACCCCCGc                                                                                     >  2:4991589/1‑93 (MQ=255)

    gCTGGTCGATTCCGGGCTGACGACACGCAACCGCCCTTCCGCAATATCTTTTTCGACCATAGGATACGGCATCGTCGCCACGCCAACCCCCGc                                                                                     >  1:3493989/1‑93 (MQ=255)

      tGGTCGATTCCGGGCTGACGACACGCAACCGCCCTTCCGCAATATCTTTTTCGACCATAGGATACGGCATCGTCGCCACGCCAACCCCCCCCa                                                                                   >  2:2593755/1‑93 (MQ=255)

       ggTCGATTCCGGGCTGACGACACGCAACCGCCCTTCCGCAATATCTTTTTCGACCATAGGATACGGCATCGTCGCCACGCCAACCCCCGCCAg                                                                                  >  1:8227759/1‑93 (MQ=255)

       ggTCGATTCCGGGCTGACGACACGCAACCGCCCTTCCGCAATATCTTTTTCGACCATAGGATACGGCATCGTCGCCACGCCAACCCCCGCCAg                                                                                  >  2:7949374/1‑93 (MQ=255)

        gTCGATTCCGGGCTGACGACACGCAACCGCCCTTCCGCAATATCTTTTTCGACCATAGGATACGGCATCGTCGCCACGCCAACCCCCGCCAGt                                                                                 >  2:3590295/1‑93 (MQ=255)

         tCGATTCGGCGCTGACGACACGCAACCGCCCTTCCGAAATATCTTTTTCGACCATAGGATACGGCATCGTCGCCACGCCAACCCCCGCCAGTa                                                                                <  2:5414680/93‑1 (MQ=255)

          cGATTCTGGGCGTACCACACGCACCCTCCCTGCCGCAATAGCTTTTGCGACCATAGGATACGGCATCGTCTTCTCGCCACCCCCCGCCCGTaa                                                                               <  2:5456135/93‑1 (MQ=255)

          cGATTCCGGGCTGACGACACGCAACCGCCCTTCCGCAATATCTTTTTCGACCATAGGATACGGCATCGTCGCCACGCCAACCCCCGCCAGTaa                                                                               >  1:5181274/1‑93 (MQ=255)

          cGATTCCGGGCTGACGACACGCAACCGCCCTTCCGCAATATCTTTTTCGACCATAGGATACGGCATCGTCGCCACGCCAACCCCCGCCAGTaa                                                                               <  1:6204199/93‑1 (MQ=255)

          cGATTCCGGGCTGACGACACGCAACCGCCCTTCCGCAATATCTTTTTCGACCATAGGATACGGCATCGTCGCCACGCCAACCCCCGCCAGTaa                                                                               <  1:4828644/93‑1 (MQ=255)

          cGATTCCGGGCTGACGACACGCAACCGCCCTTCCGCAATATCTTTTTCGACCATAGGATACGGCATCGTCGCCACGCCAACCCCCGCCAGTaa                                                                               <  2:2320852/93‑1 (MQ=255)

           gATTCCGGGCTGACGACACGCAACCGCCCTTCCGCAATATCTTTTTCGACCATAGGATACGGCATCGTCGCCACGCCAACCCCCGCCCGTaag                                                                              >  1:2284789/1‑92 (MQ=255)

           gATTCCGGGCTGACGACACGCAACCGCCCTTCCGCAATATCTTTTTCGACCATAGGATACGGCATCGTCGCCACGCCAACCCCCGCCAGTAAt                                                                              <  2:836452/93‑1 (MQ=255)

           gATTCCGGGCTGACGACACGCAACCGCCCTTCCGCAATATCTTTTTCGACCATAGGATACGGCATCGTCGCCACGCCAACCCCCGCCAGTAAt                                                                              >  2:6898452/1‑93 (MQ=255)

            aTTCCGGGCTGACGACACGCAACCGCCCTTCCGCAATATCTTTTTCGACCATAGGATACGGCATCGTCGCCACGCCAACCCCCGCCAGTAATg                                                                             >  2:8171950/1‑93 (MQ=255)

              tCCGGGCTGACGACACGCAACCGCCCTTCCGCAATATCTTTTTCGACCATAGGATACGGCATCGTCGCCACGCCAACCCCCGCCAGTAATGcc                                                                           >  1:2844169/1‑93 (MQ=255)

                cGGGCTGACGACACGCAACCGCCCTTCCGCAATATCTTTTTCGACCATAGGATACGGCATCGTCGCCACGCCAACCCCCGCCCGTAATGCCta                                                                         >  1:1895125/1‑92 (MQ=255)

                 gggCTGAGGACACGCAACCGCCCTTCCGCAATATCTTTTTCGACCATAGGATACGGCATCGTCGCCACGCCAACCCCCGCCAGTAATGCCTGa                                                                        <  1:3112630/93‑1 (MQ=255)

                  ggCTGACGACACGCAACCGCCCTTCCGCAATATCTTTTTCGACCATAGGATACGGCATCGTCGCCACGCCAACCCCCGCCAGTAATGCCTGAc                                                                       <  1:333343/93‑1 (MQ=255)

                     tGACGACACGCAACCGCCCTTCCGCAATATCTTTTTCGACCATAGGATACGGCATCGTCGCCACGCCAACCCCCGCCAGTAATGCCTGACGtt                                                                    >  1:7768233/1‑93 (MQ=255)

                      gacgacACGCAACCGCCCTTCCGCAATATCTTTTTCGACCATAGGATACGGCATCGTCGCCACGCCAACCCCCGCCAGTAATGCCTGACGttt                                                                   >  1:5800549/1‑93 (MQ=255)

                        cgacACGCAACCGCCCTTCCGCAATATCTTTTTCGACCATAGGATACGGCATCGTCGCCACGCCAACCCCCGCCAGTAATGCCTGACGTTTAt                                                                 >  1:2615916/1‑93 (MQ=255)

                          aacagCAACCGCCCTTCCGCAATATCTTTGTGGACCATAGGATACGGCATCGTCGCCACGCCAACCCCCGCCAGTAATGCCTGACGTTTATCt                                                               <  1:8002989/89‑1 (MQ=255)

                            acGCAACCGCCCTTCCGCAATATCTTTTTCGACCATAGGATACGGCATCGTCGCCACGCCAACCCCCGCCAGTAATGCCTGACGTTTATCTTc                                                             <  1:3990075/93‑1 (MQ=255)

                             cGCAACCGCCCTTCCGCAATATCTTTTTCGACCATAGGATACGGCATCGTCGCCACGCCAACCCCCGCCAGTAATGCCTGACGTTTATCTTCa                                                            <  2:6459775/93‑1 (MQ=255)

                               cAACCGCCCTTCCGCAATATCTTTTTCGACCATAGGATACGGCATCGTTGCCACGCCAACCCCCGCCAGTCATGACTGACGTTTATCTTCAAt                                                          >  2:9185383/1‑93 (MQ=255)

                                aaCCGCCCTTCCGCAATATCTTTTTCGACCATAGGATACGGCATCGTCGCCACGCCAACCCCCGCCAGTAATGCCTGACGTTTATCTTCAATc                                                         >  2:7739346/1‑93 (MQ=255)

                                 aCCGCCCTTCCGCAATATCTTTTTCGACCATAGGATACGGCATCGTCGCCACGCCAACCCCCGCCAGTAATGCCTGACGTTTATCTTCAATCg                                                        >  1:4149296/1‑93 (MQ=255)

                                 aCCGCCCTTCCGCAATATCTTTTTCGACCATAGGATACGGCATCGTCGCCACGCCAACCCCCGCCAGTAATGCCTGACGTTTATCTTCAATCg                                                        >  1:10025800/1‑93 (MQ=255)

                                 aCCGCCCTTCCGCAATATCTTTTTCGACCATAGGATACGGCATCGTCGCCACGCCAACCCCCGCCAGTAATGCCTGACGTTTATCTTCAATCg                                                        >  2:757767/1‑93 (MQ=255)

                                  ccGCCCTTCCGCAATATCTTTTTCGACCATAGGATACGGCATCGTCGCCACGCCAACCCCCGCCAGTAATGCCTGACGTTTATCTTCAATCGt                                                       <  2:4170989/93‑1 (MQ=255)

                                   cGCCCTTCCGCAATATCTTTTTCGACCATAGGATACGGCATCGTCGCCACGCCAACCCCCGCCAGTAATGCCTGACGTTTATCTTCAATCGTg                                                      >  2:9554805/1‑93 (MQ=255)

                                    gCCCTTCCGCAATATCTTTTTCGACCATAGGATACGGCATCGTCGCCACGCCAACCCCCGCCAGTAATGCCTGACGTTTATCTTCAATCGTGc                                                     <  1:5441068/93‑1 (MQ=255)

                                    gCCCTTCCGCAATATCTTTTTCGACCATAGGATACGGCATCGTCGCCACGCCAACCCCCGCCAGTAATGCCTGACGTTTATCTTCAATCGTGc                                                     <  2:1601934/93‑1 (MQ=255)

                                    ccccTTCCGCAATTTCTTTTTCGACCATAGGATACGGCATCGTCGCCACGCCAACCCCCGCCAGTAATGCCTGACGTTTATCTTCAATCGTGc                                                     <  1:4684922/92‑1 (MQ=255)

                                       cTTCCGCAATATCTTTTTCGACCATAGGATACGGCATCGTCGCCACGCCAACCCCCGCCAGTAATGCCTGACGTTTATCTTCAATCGTGCTCa                                                  >  2:864480/1‑93 (MQ=255)

                                        ttCCGCAATATCTTTTTCGACCATAGGATACGGCATCGTCGCCACGCCAACCCCCGCCAGTAATGCCTGACGTTTATCTTCAATCGTGCTCAc                                                 >  2:1342476/1‑93 (MQ=255)

                                        ttCCGCAATATCTTTTTCGACCATAGGATACGGCATCGTCGCCACGCCAACCCCCGCCAGTAATGCCTGACGTTTATCTTCAATCGTGCTCAc                                                 >  1:3137918/1‑93 (MQ=255)

                                        ttCCGCAATATCTTTTTCGACCATAGGATACGGCATCGTCGCCACGCCAACCCCCGCCAGTAATGCCTGACGTTTATCTTCAATCGTGCTCAc                                                 >  1:4233373/1‑93 (MQ=255)

                                            gCAATATCTTTTTCGACCATAGGATACGGCATCGTCGCCACGCCAACCCCCGCCAGTAATGCCTGACGTTTATCTTCAATCGTGCTCACCGtt                                             >  1:152036/1‑93 (MQ=255)

                                             cAATATCTTTTTCGACCATAGGATACGGCATCGTCGCCACGCCAACCCCCGCCAGTAATGCCTGACGTTTATCTTCAATCGTGCTCACCGTTa                                            >  1:7101496/1‑93 (MQ=255)

                                             cAATATCTTTTTCGACCATAGGATACGGCATCGTCGCCACGCCAACCCCCGCCAGTAATGCCTGACGTTTATCTTCAATCGTGCTCACCGTTa                                            >  1:3715401/1‑93 (MQ=255)

                                              aaTATCTTTTTCGACCATAGGATACGGCATCGTCGCCACGCCAACCCCCGCCAGTAATGCCTGACGTTTATCTTCAATCGTGCTCACCGTTaa                                           >  2:7859503/1‑93 (MQ=255)

                                              aaTATCTTTTTCGACCATAGGATACGGCATCGTCGCCACGCCAACCCCCGCCAGTAATGCCTGACGTTTATCTTCAATCGTGCTCACCGTTaa                                           >  2:7353128/1‑93 (MQ=255)

                                              aaTATCTTTTTCGACCATAGGATACGGCATCGTCGCCACGCCAACCCCCGCCAGTAATGCCTGACGTTTATCTTCAATAGTGCTCACCGTTaa                                           >  2:244659/1‑93 (MQ=255)

                                               atatCTTTTTCGACCATAGGATACGGCATCGTCGCCACGCCAACCCCCGCCAGTAATGCCTGACGTTTATCTTCAATCGTGCTCACCGTTAAg                                          <  2:2112147/93‑1 (MQ=255)

                                                tatCTTTTTCGACCATAGGATACGGCATCGTCGCCACGCCAACCCCCGCCAGTAATGCCTGACGTTTATCTTCAATCGTGCTCACCGTTAAgc                                         >  1:3636940/1‑93 (MQ=255)

                                                tatCTTTTTCGACCATAGGATACGGCATCGTCGCCACGCCAACCCCCGCCAGTAATGCCTGACGTTTATCTTCAATCGTGCTCACCGTTAAgc                                         >  2:4427790/1‑93 (MQ=255)

                                                tatCTTTTTCGACCATAGGATACGGCATCGTCGCCACGCCAACCCCCGCCAGTAATGCCTGACGTTTATCTTCAATCGTGCTCACCGTTAAgc                                         >  2:1656299/1‑93 (MQ=255)

                                                  tCTTTTTCGACCATAGGATACGGCATCGTCGCCACGCCAACCCCCGCCAGTAATGCCTGACGTTTATCTTCAATCGTGCTCACCGTTAAgcgc                                       <  1:1580834/93‑1 (MQ=255)

                                                   cTTTTTCGACCATAGGATACGGCATCGTCGCCACGCCAACCCCCGCCAGTAATGCCTGACGTTTATCTTCAATCGTGCTCACCGTTAAGcgcg                                      <  2:9097135/93‑1 (MQ=255)

                                                   cTTTTTCGACCATAGGATACGGCATCGTCGCCACGCCAACCCCCGCCAGTAATGCCTGACGTTTATCTTCAATCGTGCTCACCGTTAAGcgcg                                      >  1:1758864/1‑93 (MQ=255)

                                                    tttttCGACCATAGGATACGGCATCGTCGCCACGCCAACCCCCGCCAGTAATGCCTGACGTTTATCTTCAATCGTGCTCACCGTTAAGCGCgg                                     <  2:4510141/93‑1 (MQ=255)

                                                     ttttCGACCATAGGATACGGCATCGTCGCCACGCCAACCCCCGCCAGTAATGCCTGACGTTTATCTTCAATCGTGCTCACCGTTAAGCGCGGc                                    <  2:8935158/93‑1 (MQ=255)

                                                     ttttCGACCATAGGATACGGCATCGTCGCCACGCCAACCCCCGCCAGTAATGCCTGACGTTTATCTTCAATCGTGCTCACCGTTAAGCGCGGc                                    >  2:2777303/1‑93 (MQ=255)

                                                        tCGCCCATAGGATACGGCATCGTCGCCACGCCAACCCCCGCCAGTAATGCCTGACGTTTATCTTCAATCGTGCTCACCGTTAAGCGCGGCTGt                                 <  2:4616756/93‑1 (MQ=255)

                                                        tCGACCATAGGATACGGCATCGTCGCCACGCCAACCCCCGCCAGTAATGCCTGACGTTTATCTTCAATCGTGCTCACCGTTAAGCGCGGCTGt                                 <  1:9054266/93‑1 (MQ=255)

                                                         cGACCATAGGATACGGCATCGTCGCCACGCCAACCCCCGCCAGTAATGCCTGACGTTTATCTTCAATCGTGCTCACCGTTAAGCGCGGCTGtt                                <  2:6657036/93‑1 (MQ=255)

                                                           aCCATAGGATACGGCATCGTCGCCACGCCACCCCCCGCCAGTAATGCCTGACGTTTATCTTCAATCGTGCTCACCGTTAAGCGCGGCTGTTTg                              <  1:6334765/93‑1 (MQ=255)

                                                           aCCATAGGATACGGCATCGTCGCCACGCCAACCCCCGCCAGTAATGCCTGACGTTTATCTTCAATCGTGCTCACCGTTAAGCGCGGCTGTTTg                              >  2:5097093/1‑93 (MQ=255)

                                                             cATAGGATACGGCATCGTCGCCACGCCAACCCCCGCCAGTAATGCCTGACGTTTATCTTCAATCGTGCTGACCGTTAAGCGCGGCTGTTTGTc                            >  2:5538060/1‑93 (MQ=255)

                                                             cATAGGATACGGCATCGTCGCCACGCCAACCCCCGCCAGTAATGCCTGACGTTTATCTTCAATCGTGCTCATCGTTAAGCGCGGCTGTTTGTc                            >  2:4228799/1‑93 (MQ=255)

                                                             cATAGGATACGGCATCGTCGCCACGCCAACCCCCGCCAGTAATGCCTGACGTTTATCTTCAATCGTGCTCACCGTTAAGCGCGGCTGTTTGTc                            >  2:3842835/1‑93 (MQ=255)

                                                             cATAGGATACGGCATCGTCGCCACGCCAACCCCCGCCAGTAATGCCTGACGTTTATCTTCAATCGTGCTCACCGTTAAGCGCGGCTGTTTGTc                            >  1:352370/1‑93 (MQ=255)

                                                             cATAGGATACGGCATCGTCGCCACGCCAACCCCCGCCAGTAATGCCTGACGTTTATCTTCAATCGTGCTCACCGTTAAGCGCGGCTGTTTGTc                            >  2:6620050/1‑93 (MQ=255)

                                                             cATAGGATACGGCATCGTCGCCACGCCAACCCCCGCCAGTAATGCCTGACGTTTATCTTCAATCGTGCTCACCGTTAAGCGCGGCTGTTTGTc                            <  2:3280111/93‑1 (MQ=255)

                                                              aTAGGATACGGCATCGTCGCCACGCCAACCCCCGCCAGTAATGCCTGACGTTTATCTTCAATCGTGCTCACCGTTAAGCGCGGCTGTTTGTcc                           <  2:936229/93‑1 (MQ=255)

                                                               tAGGATACGGCATCGTCGCCACGCCAACCCCCGCCAGTAATGCCTGACGTTTATCTTCAATCGTGCTCACCGTTAAGCGCGGCTGTTTGTCca                          <  1:843417/93‑1 (MQ=255)

                                                               aaGGATACGGCATCGTCGCCACGCCAACCCCCGCCAGTAATGCCTGACGTTTATCTTCAATCGTGCTCACCGTTAAGCGCGGCTGTTTGTCca                          <  1:4789612/92‑1 (MQ=255)

                                                                  gATAGGCCATCGTCTCCACGCCAACCCCCGCCAGTAATGCCTGACGTTTATCTTCAATCGTGCTCACCGTTAAGCGCGGCTGTTTGTCcagca                       <  1:1046632/93‑1 (MQ=255)

                                                                  gATACGGCATCGTCGCCACGCCAACCCCCGCCAGTAATGCCTGACGTTTATCTTCAATCGTGCTCACCGTTAAGCGCGGCTGTTTGTCcagca                       >  2:3731688/1‑93 (MQ=255)

                                                                    tACGGCATCGTCGCCACGCCAACCCCCGCCAGTAATGCCTGACGTTTATCTTCAATCGTGCTCACCGTTAAGCGCGGCTGTTTGTCCagcagc                     >  1:5851220/1‑93 (MQ=255)

                                                                    tACGGCATCGTCGCCACGCCAACCCCCGCCAGTAATGCCTGACGTTTATCTTCAATCGTGCTCACCGTTAAGCGCGGCTGTTTGTCCagcagc                     >  2:1167795/1‑93 (MQ=255)

                                                                     aCGGCATCGTCGCCACGCCAACCCCCGCCAGTAATGCCTGACGTTTATCTTCAATCGTGCTCACCGTTAAGCGCGGCTGTTTGTCCAGCAGCt                    <  1:4871234/93‑1 (MQ=255)

                                                                     aCGGCATCGTCACCACGCCACCCCCCGCCAGTAATGCCTGACGTTTATCTTCAATCGTGCTCACCGTTAAGCGCGGCTGTTTGTCCAGCAGCt                    <  1:2475141/93‑1 (MQ=255)

                                                                        tcttcgtcgCCACGCCAACCCCCGCCAGTAATGCCTGGCGTTTATCTTCAATCGTGCTCACCGTTAAGCGCGGCTGTTTGTCCAGCAGCTGTa                 <  1:7324526/90‑1 (MQ=255)

                                                                        gCATCGTCGCCACGCCAACCCCCGCCAGTAATGCCTGACGTTTATCTTCAATCGTGCTCACCGTTAAGCGCGGCTGTTTGTCCAGCAGCTGtc                 >  2:7138806/1‑92 (MQ=255)

                                                                        gCATCGTCGCCACGCCAACCCCCGCCAGTAATGCCTGACGTTTATCTTCAATCGTGCTCACCGTTAAGCGCGGCTGTTTGTCCAGCAGCTGTa                 <  1:9794185/93‑1 (MQ=255)

                                                                        gCATCGTCGCCACGCCAACCCCCGCCAGTAATGCCTGACGTTTATCTTCAATCGTGCTCACCGTTAAGCGCGGCTGTTTGTCCAGCAGCTGTa                 >  1:999058/1‑93 (MQ=255)

                                                                         cATCGTCGCCCCGCCAACCCCCGCCAGTAATGCCTGACGTTTATCTTCAATCGTGCTCACCGTTAAGCGCGGCTGTTTGTCCAGCAGCTGTAc                <  2:7170869/93‑1 (MQ=255)

                                                                         cATCGTCGCCACGCCAACCCCCGCCAGTAATGCCTGACGTTTATCTTCAATCGTGCTCACCGTTAAGCGCGGCTGTTTGTCCAGCAGCTGTAc                <  2:2652969/93‑1 (MQ=255)

                                                                         cATCGTCGCCACGCCAACCCCCGCCAGTAATGCCTGACGTTTATCTTCAATCGTGCTCACCGTTAAGCGCGGCTGTTTGTCCAGCAGCTGTAc                <  2:3972060/93‑1 (MQ=255)

                                                                          aTCGTCGCCACGCCAACCCCCGCCAGTAATGCCTGACGTTTATCTTCAATCGTGCTCACCGTTAAGCGCGGCTGTTTGTCCAGCAGCTGTACg               >  2:6089704/1‑93 (MQ=255)

                                                                           tcgtcgCCACGCCAACCCCCGCCAGTAATGCCTGACGTTTATCTTCAATCGTGCTCACCGTTAAGCGCGGCTGTTTGTCCAGCAGCTGTACgg              >  1:5072359/1‑93 (MQ=255)

                                                                            cgtcgCCACCCCACCCCCCGCCAGTAATGCCTGACGTTTATCTTCAATCGTGCTCACCGTTAAGCGCGGCTGTTTGTCCAGCAGCTGTACGGt             <  1:961018/93‑1 (MQ=255)

                                                                             gtcgCCACGCCAACCCCCGCCAGTAATGCCTGACGTTTATCTTCAATCGTGCTCACCGTTAAGCGCGGCTGTTTGTCCAGCAGCTGTACGGTc            >  2:8095722/1‑93 (MQ=255)

                                                                               cgccacgccaCCCCCCGCCAGTAATGCCTGACGTTTATCTTCAATCGTGCTCACCGTTAAGCGCGGCTGTTTGTCCAGCAGCTGTACGGTCaa          <  1:6398250/93‑1 (MQ=255)

                                                                                cccccgccaCCCCCCGCCAGTAATGCCTGACGTTTATCTTCAATCGTGCTCACCGTTAAGCGCGGCTGTTTGTCCAGCAGCTGTACGGTCAac         <  1:9016117/89‑1 (MQ=255)

                                                                                cccacgccaACCCCCGCCAGTAATGCCTGACGTTTATCTTCAATCGTGCTCACCGTTAAGCGCGGCTGTTTGTCCAGCAGCTGTACGGTCAac         <  2:5916910/92‑1 (MQ=255)

                                                                                 ccacgccaCCCCCCGCCAGTAATGCCTGACGTTTATCTTCAATCGTGCTCACCGTTAAGCGCGGCTGTTTGTCCAGCAGCTGTACGGTCAaca        <  1:1648989/93‑1 (MQ=255)

                                                                                 ccacgccaACCCCCGCCAGTAATGCCTGACGTTTATCTTCAATCGTGCTCACCGTTAAGCGCGGCTGTTTGTCCAGCAGCTGTACGGTCAaca        <  1:6693605/93‑1 (MQ=255)

                                                                                 ccacgccaACCCCCGCCAGTAATGCCTGACGTTTATCTTCAATCGTGCTCACCGTTAAGCGCGGCTGTTTGTCCAGCAGCTGTACGGTCAaca        <  1:4476665/93‑1 (MQ=255)

                                                                                  cacgccaCCCCCCGCCAGTAATGCCTGACGTTTATCTTCAATCGTGCTCACCGTTAAGCGCGGCTGTTTGTCCAGCAGCTGTACGGTCAacac       <  1:6900387/93‑1 (MQ=255)

                                                                                  cacgccaACCCCCGCCAGTAATGCCTGACGTTTATCTTCAATCGTGCTCACCGTTAAGCGCGGCTGTTTGTCCAGCAGCTGTACGGTCAacac       >  2:1522971/1‑93 (MQ=255)

                                                                                   ccgccaCCCCCCGCCAGTAATGCCTGACGTTTATCTTCAATCGTGCTCACCGTTAAGCGCGGCTGTTTGTCCAGCAGCTGTACGGTCAACAcc      <  2:7798672/92‑1 (MQ=255)

                                                                                   acgccaCCCCCCGCCAGTAATGCCTGACGTTTATCTTCAATCGTGCTCACCGTTAAGCGCGGCTGTTTGTCCAGCAGCTGTACGGTCAACAcc      <  2:3494717/93‑1 (MQ=255)

                                                                                    cgccaACCCCCGCCAGTAATGCCTGACGTTTATCTTCAATCGTGCTCACCGTTAAGCGCGGCTGTTTGTCCAGCAGCTGTACGGTCAACACCg     >  1:8758698/1‑93 (MQ=255)

                                                                                       caACCCCCGCCAGTAATGCCTGACGTTTATCTTCAATCGTGCTCACCGTTAAGCGCGGCTGTTTGTCCAGCAGCTGTACGGTCAACACCGGgc  >  1:60283/1‑93 (MQ=255)

TCTCGCTGGTCGATTCCGGGCTGACGACACGCAACCGCCCTTCCGCAATATCTTTTTCGACCATAGGATACGGCATCGTCGCCACGCCAAGCCCCGCCAGTAATGCCTGACGTTTATCTTCAATCGTGCTCACCGTTAAGCGCGGCTGTTTGTCCAGCAGCTGTACGGTCAACACCGGGC  >  NC_000913/3251050‑3251229

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`