Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,284,393 A→G E161E (GAA→GAG agaI → putative galactosamine‑6‑phosphate isomerase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,284,3930AG99.7% 905.3 / ‑5.3 286E161E (GAA→GAGagaIputative galactosamine‑6‑phosphate isomerase
Reads supporting (aligned to +/- strand):  ref base A (0/1);  new base G (169/115);  total (169/117)
Fisher's exact test for biased strand distribution p-value = 4.07e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.73e-01

Only 100 of 345 total aligned reads displayed.

CGAACGGGTAACGAACCTGATTGCGCGCAAAGGCGGTCTGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAACCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCAACATGAGATGTTAAAAACCGCGGGTCGCCC  >  NC_000913/3284303‑3284482
                                                                                           |                                                                                         
cGAACGGGTAACGAACCTGATTGCGCGCAAAGGCGGTCTGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGcc                                                                                         >  2:8032541/1‑93 (MQ=255)
 gAACGGGTAACGAACCTGATTGCGCGCAAAGGCGGTCTGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCg                                                                                        >  2:8216228/1‑93 (MQ=255)
   aCGGGTAACGAACCTGATTGCGCGCAAAGGCGGTCTGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCggg                                                                                      <  2:2117247/93‑1 (MQ=255)
   aCGGGTAACGAACCTGATTGCGCGCAAAGGCGGTCTGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCggg                                                                                      <  1:8233914/93‑1 (MQ=255)
    cGGGTAACGAACCTGATTGCGCGCAAAGGCGGTCTGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGga                                                                                     >  1:4484038/1‑93 (MQ=255)
     gggTAACGAACCTGATTGCGCGCAAAGGCGGTCTGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGgag                                                                                    <  1:7595351/93‑1 (MQ=255)
      ggTAACGAACCTGATTGCGCGCAAAGGCGGTCTGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGgaga                                                                                   >  2:2829317/1‑93 (MQ=255)
       gTAACGAACCTGATTGCGCGCAAAGGCGGTCTGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCTGGAGaa                                                                                  >  1:6684784/1‑93 (MQ=255)
       gTAACGAACCTGATTGCGCGCAAAGGCGGTCTGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGaa                                                                                  >  2:4597219/1‑93 (MQ=255)
       gTAACGAACCTGATTGCGCGCAAAGGCGGTCTGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGaa                                                                                  >  1:2824564/1‑93 (MQ=255)
       gTAACGAACCTGATTGCGCGCAAAGGCGGTCTGGAGTTATGCGTTCTCGGATTGGGGAAAAACGGGCATCTTGGGCTGAACGAGCCGGGAGaa                                                                                  >  1:1792771/1‑93 (MQ=255)
        tAACGAACCTGATTGCGCGCAAAGGCGGTCTGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGaaa                                                                                 >  2:2329282/1‑93 (MQ=255)
         aaCGAACCTGATTGCGCGCAAAGGCGGTCTGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAg                                                                                <  1:2436721/93‑1 (MQ=255)
           cGAACCTGATTGCGCGCAAAGGCGGTCTGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGcc                                                                              <  1:6554979/93‑1 (MQ=255)
           cGAACCTGATTGCGCGCAAAGGCGGTCTGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGcc                                                                              <  1:5090964/93‑1 (MQ=255)
            gAACCTGATTGCGCGCAAAGGCGGTCTGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGccg                                                                             >  2:7127803/1‑92 (MQ=255)
            gAACCTGATTGCGCGCAAAGGCGGTCTGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCt                                                                             >  2:6431648/1‑93 (MQ=255)
            gAACCTGATTGCGCGCAAAGGCGGTCTGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCt                                                                             >  2:871767/1‑93 (MQ=255)
             aaCCTGATTGCGCGCAAAGGCGGTCTGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTg                                                                            >  2:607042/1‑93 (MQ=255)
              aCCTGATTGCGCGCAAAGGCGGTCTGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGc                                                                           >  2:1742441/1‑93 (MQ=255)
              aCCTGATTGCGCGCAAAGGCGGTCTGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGc                                                                           >  2:2028328/1‑93 (MQ=255)
               gcTGATTGGGGGGAGAGGCGGTCTGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCa                                                                          <  1:5983492/92‑1 (MQ=255)
                  gATTGCGCGCAAAGGCGGTCTGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAAcc                                                                       <  2:9140610/93‑1 (MQ=255)
                   aTTGCGCGCAAAGGCGGTCTGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCg                                                                      >  2:9332985/1‑93 (MQ=255)
                   aTTGCGCGCAAAGGCGGTCTGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCg                                                                      <  1:3835235/93‑1 (MQ=255)
                    ttGCGCGCAAAGGCGGTCTGGATTTATGCGTTCTCTGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCgg                                                                     >  1:1835621/1‑93 (MQ=255)
                     tgggcgcAAAGGCGGTCGGGATTTATGCGTTCGCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGc                                                                    <  1:5675800/90‑1 (MQ=255)
                      gcgcgcAAAGGCGGTCTGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGcc                                                                   <  2:3228522/93‑1 (MQ=255)
                      gcgcgcAAAGGCGGTCTGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGcc                                                                   <  2:4700537/93‑1 (MQ=255)
                         cgcAAAGGCGGTCTGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCCTCTTGGGCTGAACGAGCCGGGGGAAAGCCTGCAACCGGCCTGc                                                                >  2:8155133/1‑93 (MQ=255)
                         cgcAAAGGCGGTCTGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGc                                                                >  1:6719194/1‑93 (MQ=255)
                          gcAAAGGCGGTCTGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGcc                                                               >  1:9321130/1‑93 (MQ=255)
                           gaaaGGCGGTCTGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCa                                                              <  1:3323219/92‑1 (MQ=255)
                            aaaGGCGGTCTGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCat                                                             >  1:6765124/1‑93 (MQ=255)
                             aaGGCGGTCTGGATTTATGCGTTCGCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCata                                                            <  2:9630488/93‑1 (MQ=255)
                              aGGCGGTCTGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCatat                                                           >  1:2462384/1‑93 (MQ=255)
                              aGGCGGTCTGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCatat                                                           >  1:588191/1‑93 (MQ=255)
                               ggCGGTCTGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATc                                                          <  2:1184293/93‑1 (MQ=255)
                               ggCGGTCTGGATTTATACTTTATGGGATGGGGGAAAAACGGTCATCTTGGGCTAAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATc                                                          <  1:8963003/93‑1 (MQ=255)
                               ggCGGTCTGAATTTATGCGTTCTCGGATTGGGGAAAACCGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATc                                                          <  2:5892560/93‑1 (MQ=255)
                               gccGGTCGGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATc                                                          <  2:4974658/91‑1 (MQ=255)
                                ggggTTTGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCa                                                         <  1:3055104/91‑1 (MQ=255)
                                gCGGTCTGTATTTATGCGTTCTCGGATTGGGAAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCa                                                         <  2:3748350/93‑1 (MQ=255)
                                  ggTCTGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGt                                                       >  1:4185347/1‑93 (MQ=255)
                                  ggTCTGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAACCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGt                                                       <  1:3578361/93‑1 (MQ=255)
                                   gTCTGATTTTATGCGTCCTCGGATTGGGAAAAAACGGTCATCTTGGGCTGACCGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTc                                                      <  2:8928913/93‑1 (MQ=255)
                                    tCTGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTCCCATATCAGCCa                                                     >  2:7594822/1‑93 (MQ=255)
                                     ttGGATTTATGCTTTCTCGGATTGGGGAAAAACGGTCATCTGGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCaa                                                    <  1:2988630/92‑1 (MQ=255)
                                      tGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCaat                                                   >  2:8616045/1‑92 (MQ=255)
                                      tGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAAc                                                   >  1:4318186/1‑93 (MQ=255)
                                      tGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAAc                                                   <  1:777445/93‑1 (MQ=255)
                                      tGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAAc                                                   >  1:635072/1‑93 (MQ=255)
                                      tGGATTTATGCGTTCTCGGATGGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAAc                                                   <  1:152933/93‑1 (MQ=255)
                                        gATTTATGCGTTCTGGGATGGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACtt                                                 <  2:8570655/93‑1 (MQ=255)
                                        gATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACtt                                                 >  2:9024753/1‑93 (MQ=255)
                                        gATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACtt                                                 <  2:4192636/93‑1 (MQ=255)
                                        gATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACtt                                                 >  1:5547432/1‑93 (MQ=255)
                                          tttATGCGTTCTCGGATGGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGa                                               <  1:604298/93‑1 (MQ=255)
                                            tATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATg                                             >  1:10002452/1‑93 (MQ=255)
                                             aTGCGTTCTCGGATTGGGGAAAACCGGTAATCTTGGGCTAAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCCACTTGATGc                                            <  1:6190049/93‑1 (MQ=255)
                                             aTGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGc                                            >  2:5382922/1‑93 (MQ=255)
                                               gCGTTCTCGGATTGGGGAAAAAAGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCa                                          >  1:3417902/1‑93 (MQ=255)
                                                 gTTCTAGGATGGGGAAAAACGGGTCATCTGGGGCTGACCGAGCCGGGAGAAAGCCTGCACCCGGCCTGCCATATCAGTCAACTTGATGCCAGa                                        <  2:7293533/93‑1 (MQ=255)
                                                  ttCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGaa                                       >  2:7994033/1‑93 (MQ=255)
                                                    ctcGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAaca                                     >  2:5197537/1‑93 (MQ=255)
                                                     tcGGATGGGGAAAACACGGGCATCTGGGGGTGAGCGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAacac                                    <  1:3698529/93‑1 (MQ=255)
                                                       ggATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCCACTTGATGCCAGAACACAg                                  >  1:8393847/1‑93 (MQ=255)
                                                        gATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGc                                 >  2:105680/1‑93 (MQ=255)
                                                        gATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGc                                 >  2:4794521/1‑93 (MQ=255)
                                                        gATTGGGGAAAAACGGTCATCTTGGGCTCAACGAGCCGGAAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGc                                 <  1:9937195/93‑1 (MQ=255)
                                                        gATGGGGAAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGGCATATCAGTCAACTTGATGGCAGAACACAGc                                 <  2:8357703/93‑1 (MQ=255)
                                                          ttGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCaa                               >  2:289889/1‑93 (MQ=255)
                                                          ttGGGAAAAAACGTTCATCTTGGCCTAAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCaa                               <  1:4056532/93‑1 (MQ=255)
                                                            ggggAAAAACGTTCATCTTGGGCTAAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCAACa                             <  2:394696/93‑1 (MQ=255)
                                                            ggggAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCAACa                             <  2:3339167/93‑1 (MQ=255)
                                                                aaaaaCGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCAACATgag                         >  2:1939095/1‑93 (MQ=255)
                                                                 aaaaGGGTCATTTGGGGCTGAAGGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCAACATgaga                        <  2:7422801/93‑1 (MQ=255)
                                                                 aaaaCGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCAACATgaga                        >  2:6759450/1‑93 (MQ=255)
                                                                  aaaCGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCAACATGAGAt                       >  1:2350679/1‑93 (MQ=255)
                                                                   aaCGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCAACATGAGATg                      >  2:7724562/1‑93 (MQ=255)
                                                                    aCGGTCATCTGGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCAACATGAGATGt                     <  1:8026931/93‑1 (MQ=255)
                                                                        gTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCAACATGAGATGTTaa                  >  2:1001973/1‑93 (MQ=255)
                                                                        gTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCAACATGAGATGTTaa                  >  1:9634065/1‑93 (MQ=255)
                                                                         taaTCTGGGGATGAACGAGCGGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCAACATGAGATGTTaaa                 <  1:4762912/91‑1 (MQ=255)
                                                                          cATCTTGGGCAGACCGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCAACATGAGATGTTaaaa                <  1:2598274/93‑1 (MQ=255)
                                                                            tCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCAACATGAGATGTTAAAAAc              >  2:7018883/1‑93 (MQ=255)
                                                                             ttggggCTGACCGAGCGGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCAACATGAGATGTTAAAAAcc             <  2:3842293/90‑1 (MQ=255)
                                                                              ttGGGCTGAAGGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCAACATGAGATGTTAAAAACcg            <  1:5226862/93‑1 (MQ=255)
                                                                               tGGGCGGAGCGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCAACATGAGATGTTAAAAACcgc           <  1:2199762/93‑1 (MQ=255)
                                                                               ggggCGGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCAACATGAGATGTTAAAAACcgc           <  1:9606854/92‑1 (MQ=255)
                                                                                gggCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCAACATGAGATGTTAAAAACcgcg          >  2:2529191/1‑93 (MQ=255)
                                                                                gggCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCAACATGAGATGTTAAAAACcgcg          >  1:1994462/1‑93 (MQ=255)
                                                                                gggCGGAAGGAGCCGGGAGAAAGCCTGCACCCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCAACATGAGATGTTAAAAACcgcg          <  1:729546/93‑1 (MQ=255)
                                                                                 ggCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCAACATGAGATGTTAAAAACCGCgg         >  1:1139806/1‑93 (MQ=255)
                                                                                  gCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCAACATGAGATGTTAAAAACCGCggg        >  2:237401/1‑93 (MQ=255)
                                                                                  gCTGAACGAGCCGGAAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCAACATGAGATGTTAAAAACCGCggg        <  1:9808932/93‑1 (MQ=255)
                                                                                    tGAACGAGCGGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCAACATGAGATGTTAAAAACCGCGGGTc      <  2:6262503/93‑1 (MQ=255)
                                                                                     gaacgagcCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCAACATGAGATGTTAAAAACCGCGGGTCg     >  1:7007024/1‑93 (MQ=255)
                                                                                     gaacgagcCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCAACATGAGATGTTAAAAACCGCGGGTCg     >  2:3565902/1‑93 (MQ=255)
                                                                                       acgagcCGGGAGAAAGCCTGCAACCGGCGTGCCAGATCAGGCGACTTGATGCGAGAACACAGCAGCATGAGATGTTAACAACCGCGGgccgcc   >  1:208793/1‑93 (MQ=255)
                                                                                           |                                                                                         
CGAACGGGTAACGAACCTGATTGCGCGCAAAGGCGGTCTGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAACCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCAACATGAGATGTTAAAAACCGCGGGTCGCCC  >  NC_000913/3284303‑3284482

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: