BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,289,431	T→C	G150G (GGT→GGC)	yraK →	putative fimbrial protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,289,431	0	T	C	100.0%	1457.5 / NA	451	G150G (GGT→GGC)	yraK	putative fimbrial protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (238/213); total (238/213)

Only 100 of 467 total aligned reads displayed.

CGACCAGGTTGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGTGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGACCAT  >  NC_000913/3289341‑3289520

  aCCAGGTTGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATa                                                                                       <  2:9374889/93‑1 (MQ=255)

   ccAGGTTGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATAc                                                                                      <  1:2888292/93‑1 (MQ=255)

    cAGGTTGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACg                                                                                     <  2:7457348/93‑1 (MQ=255)

     aGGTTGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGt                                                                                    >  1:501168/1‑93 (MQ=255)

       gTTGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGtct                                                                                  >  1:1431760/1‑93 (MQ=255)

       gTTGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGtct                                                                                  >  1:8862725/1‑93 (MQ=255)

        ttGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGtctc                                                                                 >  1:6437359/1‑93 (MQ=255)

        ttGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGtctc                                                                                 <  2:3477350/93‑1 (MQ=255)

          ttctcTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGt                                                                               <  2:7384771/92‑1 (MQ=255)

          tgctctGTTAACACCCGGTTCCGACAGATAAAAAACAACGCGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGt                                                                               <  1:8444979/91‑1 (MQ=255)

            ctctGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTa                                                                             <  2:7085459/93‑1 (MQ=255)

            ctctGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTa                                                                             <  2:1423207/93‑1 (MQ=255)

             tctGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGttct                                                                            >  2:5476579/1‑91 (MQ=255)

              ctGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATg                                                                           <  2:2609466/93‑1 (MQ=255)

              ctGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATCCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATg                                                                           <  2:7832835/93‑1 (MQ=255)

               tGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATgg                                                                          >  2:1022120/1‑93 (MQ=255)

                 ttAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGAc                                                                        >  1:2726924/1‑93 (MQ=255)

                  tAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGAcc                                                                       <  1:7192704/93‑1 (MQ=255)

                  tAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGAcc                                                                       >  1:5860561/1‑93 (MQ=255)

                     cacCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGt                                                                    >  2:564087/1‑93 (MQ=255)

                     cacCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGt                                                                    <  2:6646799/93‑1 (MQ=255)

                        ccGATTCACAAAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTaa                                                                 <  1:7146948/93‑1 (MQ=255)

                          gATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAata                                                               >  2:3204473/1‑93 (MQ=255)

                          gATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAata                                                               <  2:7715909/93‑1 (MQ=255)

                          gATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAata                                                               <  1:4152062/93‑1 (MQ=255)

                          gATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAata                                                               <  2:5824975/93‑1 (MQ=255)

                           aTTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAatat                                                              >  1:1720835/1‑93 (MQ=255)

                            ttCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATAtt                                                             >  2:6971252/1‑93 (MQ=255)

                            ttCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATAtt                                                             <  2:9749980/93‑1 (MQ=255)

                            ttCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATAtt                                                             >  1:3254289/1‑93 (MQ=255)

                                cacaGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTg                                                         <  2:5093703/93‑1 (MQ=255)

                                   aGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGa                                                      >  1:9584463/1‑93 (MQ=255)

                                    gATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGaa                                                     >  1:5532959/1‑93 (MQ=255)

                                    gATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGaa                                                     >  2:5293726/1‑93 (MQ=255)

                                      tAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAaca                                                   <  1:8725111/93‑1 (MQ=255)

                                        aaaaaCAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAAcacc                                                 <  2:1666360/93‑1 (MQ=255)

                                           aacaacACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACaccacc                                              >  2:5971217/1‑93 (MQ=255)

                                           aacaacACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACaccacc                                              <  2:8344553/93‑1 (MQ=255)

                                           aacaacACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACaccacc                                              <  1:5716138/93‑1 (MQ=255)

                                           aacaacACGGGATATTCTGCTGCAACCCAAACGGGGGTTTGCCAGGGCGATACGTCTCGTTATGGCTCCGTTAATAGTGGTGCGAAGaccacc                                              >  1:4435282/1‑93 (MQ=255)

                                            acaacaCGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCt                                             <  2:1239810/93‑1 (MQ=255)

                                              aacaCGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCttt                                           >  1:7775640/1‑93 (MQ=255)

                                               acacGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTa                                          <  1:5340692/93‑1 (MQ=255)

                                                cacGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTAc                                         >  2:3120551/1‑93 (MQ=255)

                                                cacGGGATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTAc                                         >  2:9476042/1‑93 (MQ=255)

                                                  cGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTAccc                                       <  2:4331128/93‑1 (MQ=255)

                                                  cGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTAccc                                       >  1:10011109/1‑93 (MQ=255)

                                                  cGGTATATTCTGCTGCAACCCAAACGGGTGGTTGCCAGGGCGATACGTCTCGTGATGGACCCGTTAATATTGGTGCGAACACCACCTTTAccc                                       >  1:4318641/1‑93 (MQ=255)

                                                     tataTTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGt                                    <  2:8468498/93‑1 (MQ=255)

                                                      atatTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTa                                   >  1:8231660/1‑93 (MQ=255)

                                                      atatTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTa                                   <  2:4526400/93‑1 (MQ=255)

                                                      atatTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTa                                   <  1:9638088/93‑1 (MQ=255)

                                                      atatTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTa                                   <  1:121055/93‑1 (MQ=255)

                                                       tatTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTAt                                  >  2:9905789/1‑93 (MQ=255)

                                                        atTCTGCTGCAACCTAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATg                                 <  2:3317924/93‑1 (MQ=255)

                                                        atTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATg                                 <  1:1954421/93‑1 (MQ=255)

                                                        atTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATg                                 >  2:6150621/1‑93 (MQ=255)

                                                         ttCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGt                                >  1:9397259/1‑93 (MQ=255)

                                                         ttCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGt                                >  2:9572972/1‑93 (MQ=255)

                                                            tgctgcAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCAc                             >  1:8550452/1‑93 (MQ=255)

                                                             gctgcAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCAcc                            <  1:2386949/93‑1 (MQ=255)

                                                             gctgcAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCAcc                            >  1:633973/1‑93 (MQ=255)

                                                              ctgcAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCTTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCa                           <  1:4881996/93‑1 (MQ=255)

                                                              ctgcAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCa                           >  1:258079/1‑93 (MQ=255)

                                                              ctgcAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCa                           <  2:8787353/93‑1 (MQ=255)

                                                               tgcAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCaa                          >  1:3926548/1‑93 (MQ=255)

                                                               cgcAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCaa                          <  2:196077/92‑1 (MQ=255)

                                                                gcAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAg                         >  2:3991633/1‑93 (MQ=255)

                                                                   aCCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAAGACCACCTTTACCCTGTATGTCACCAAGCCa                      >  1:3687982/1‑93 (MQ=255)

                                                                   aCCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCa                      <  1:3477577/93‑1 (MQ=255)

                                                                   aCCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCa                      >  2:7999166/1‑93 (MQ=255)

                                                                   aCCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCa                      <  2:9006040/93‑1 (MQ=255)

                                                                    cccAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCAt                     <  1:7409922/93‑1 (MQ=255)

                                                                    cccAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCAt                     >  1:6876520/1‑93 (MQ=255)

                                                                     ccAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCAtt                    <  2:4116124/93‑1 (MQ=255)

                                                                     ccAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCAtt                    >  2:368774/1‑93 (MQ=255)

                                                                      cAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCAttt                   >  1:6067503/1‑93 (MQ=255)

                                                                         aCGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTAGCCTGTATGTCACCAAGCCATTtctc                >  2:1767104/1‑93 (MQ=255)

                                                                         aCGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTtctc                <  1:4046304/93‑1 (MQ=255)

                                                                         aCGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTtctc                >  1:4567168/1‑93 (MQ=255)

                                                                         aCGGGTGTTGGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCTCCTTTACCCTGTATGTCACCAAGCCATTtctc                <  1:833618/93‑1 (MQ=255)

                                                                            ggTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGc             <  2:5246427/93‑1 (MQ=255)

                                                                             gtgtTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCt            <  2:2665280/93‑1 (MQ=255)

                                                                              tgtTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTc           >  2:6278454/1‑93 (MQ=255)

                                                                                tttGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGa         <  2:2297616/93‑1 (MQ=255)

                                                                                gttGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGa         <  2:2463007/92‑1 (MQ=255)

                                                                                 ttGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGAt        >  1:9215204/1‑93 (MQ=255)

                                                                                 ttGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGAt        <  1:9790333/93‑1 (MQ=255)

                                                                                 tggCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTGCCCTGTATGTCACCAAGCCATTTCTCGGCTCGAt        <  2:8668254/91‑1 (MQ=255)

                                                                                   tccAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGa      <  1:6303764/92‑1 (MQ=255)

                                                                                   gCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGa      >  1:9040373/1‑93 (MQ=255)

                                                                                     cAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGAcc    >  1:3008879/1‑93 (MQ=255)

                                                                                      aGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGACCa   <  1:5096307/93‑1 (MQ=255)

                                                                                      aGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGACCa   >  1:773544/1‑93 (MQ=255)

                                                                                      aGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGACCa   <  2:4693004/93‑1 (MQ=255)

                                                                                      aGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGACCa   <  1:8018741/93‑1 (MQ=255)

                                                                                      aGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGACCa   >  2:8384728/1‑93 (MQ=255)

                                                                                       gggCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTATCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGAACAt  >  1:2077799/1‑93 (MQ=255)

                                                                                       gggCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGACCAt  <  2:7231784/93‑1 (MQ=255)

                                                                                       gggCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGACCAt  >  1:674140/1‑93 (MQ=255)

CGACCAGGTTGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGTGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGACCAT  >  NC_000913/3289341‑3289520

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`