BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,289,828	G→A	V283I (GTA→ATA)	yraK →	putative fimbrial protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,289,828	0	G	A	100.0%	1677.6 / NA	453	V283I (GTA→ATA)	yraK	putative fimbrial protein
Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (212/241); total (212/241)

Only 100 of 494 total aligned reads displayed.

ACTCCAGTAGACTTTGATATCACTTATGACTGTGGTGATACTTCAAAGATTAAAAACTCGTTGCAAATGCGCATCGACGGTACAACTGGGGTAGTAGACCAGTACAACCTGGTCGCCAGGCGAAGAAGTTCAGACAATGTGCCCGATGTCGGTATTCGTATTGAAAATCTCGGCGGCGGA  >  NC_000913/3289738‑3289917

aCTCCAGTAGACTTTGATATCACTTATGACTGTGGTGATACTTCAAAGATTAAAAACTCGTTGCAAATGCGCATCGACGGTACAACTGGGata                                                                                         <  1:2015640/93‑1 (MQ=255)

aCTCCAGTAGACTTTGATATCACTTATGACTGTGGTGATACTTCAAAGATTAAAAACTCGTTGCAAATGCGCATCGACGGTACAACTGGGata                                                                                         <  1:7844291/93‑1 (MQ=255)

 cTCCAGTAGACTTTGATATCACTTATGACTGTGGTGATACTTCAAAGATTAAAAACTCGTTGCAAATGCGCATCGACGGTACAACTGGGatag                                                                                        <  2:6745207/93‑1 (MQ=255)

 cTCCAGTAGACTTTGATATCACTTATGACTGTGGTGATACTTCAAAGATTAAAAACTCGTTGCAAATGCGCATCGACGGTACAACTGGGatag                                                                                        <  2:4549165/93‑1 (MQ=255)

 cTCCAGTAGACTTTGATATCACTTATGACTGTGGTGATACTTCAAAGATTAAAAACTCGTTGCAAATGCGCATCGACGGTACAACTGGGatag                                                                                        <  1:7708117/93‑1 (MQ=255)

  tCCAGTAGACTTTGATATCACTTATGACTGTGGTGATACTTCAAAGATTAAAAACTCGTTGCAAATGCGCATCGACGGTACAACTGGGatagt                                                                                       >  2:558719/1‑93 (MQ=255)

  tCCAGTAGACTTTGATATCACTTATGACTGTGGTGATACTTCAAAGATTAAAAACTCGTTGCAAATGCGCATCGACGGTACAACTGGGatagt                                                                                       >  1:1016323/1‑93 (MQ=255)

   ccAGTAGACTTTGATATCACTTATGACTGTGGTGATACTTCAAAGATTAAAAACTCGTTGCAAATGCGCATCGACGGTACAACTGGGatagta                                                                                      <  1:8060397/93‑1 (MQ=255)

   ccAGTAGACTTTGATATCACTTATGACTGTGGTGATACTTCAAAGATTAAAAACTCGTTGCAAATGCGCATCGACGGTACAACTGGGatagta                                                                                      <  2:3042833/93‑1 (MQ=255)

   ccAGTAGACTTTGATATCACTTATGACTGTGGTGATACTTCAAAGATTAAAAACTCGTTGCAAATGCGCATCGACGGTACAACTGGGatagta                                                                                      <  2:5089689/93‑1 (MQ=255)

     aGTAGACTTTGATATCACTTATGACTGTGGTGATACTTCAAAGATTAAAAACTCGTTGCAAATGCGCATCGACGGTACAACTGGGATAGTAGa                                                                                    >  2:1423833/1‑93 (MQ=255)

     aGTAGACTTTGATATCACTTATGACTGTGGTGATACTTCAAAGATTAAAAACTCGTTGCAAATGCGCATCGACGGTACAACTGGGATAGTAGa                                                                                    >  2:9375606/1‑93 (MQ=255)

      gTAGACTTTGATATCACTTATGACTGTGGTGATACTTCAAAGATTAAAAACTCGTTGCAAATGCGCATCGACGGTACAACTGGGATAGTAGAc                                                                                   >  2:7491261/1‑93 (MQ=255)

       tAGACTTTGATATCACTTATGACTGTGGTGATACTTCAAAGATTAAAACCTCGTTGCAAATGCGCATCGACGGTACAACTGGGATAGTAGAcc                                                                                  <  2:873610/93‑1 (MQ=255)

       tAGACTTTGATATCACTTATGACTGTGGTGATACTTCAAAGATTAAAAACTCGTTGCAAATGCGCATCGACGGTACAACTGGGATAGTAGAcc                                                                                  <  1:4944242/93‑1 (MQ=255)

        aGACTTTGATATCACTTATGACTGTGGTGATACTTCAAAGATTAAAAACTCGTTGCAAATGCGCATCGACGGTACAACTGGGATAGTAGACCa                                                                                 <  2:8131013/93‑1 (MQ=255)

         gACTTTGATATCACTTATGACTGTGGTGATACTTCAAAGATTAAAAACTCGTTGCAAATGCGCATCGACGGTACAACTGGGATAGTAGACCAg                                                                                <  2:6463682/93‑1 (MQ=255)

         gACTTTGATATCACTTATGACTGTGGTGATACTTCAAAGATTAAAAACTCGTTGCAAATGCGCATCGACGGTACAACTGGGATAGTAGACCAg                                                                                >  2:4688918/1‑93 (MQ=255)

         gACTTTGATATCACTTATGACTGTGGTGATACTTCAAAGATTAAAAACTCGTTGCAAATGCGCATCGACGGTACAACTGGGATAGTAGACCAg                                                                                >  1:4097006/1‑93 (MQ=255)

         gACTTTGATATCACTTATGACTGTGGTGATACTTCAAAGATTAAAAACTCGTTGCAAATGCGCATCGACGGTACAACTGGGATAGTAGACCAg                                                                                >  1:3930966/1‑93 (MQ=255)

            tttGATATCACTTATGACTGTGGTGATACTTCAAAGATTAAAAACTCGTTGCAAATGCGCATCGACGGTATAACTGGGATAGTAGACCAGTAc                                                                             >  2:6994354/1‑93 (MQ=255)

            tttGATATCACTTATGACTGTGGTGATACTTCAAAGATTAAAAACTCGTTGCAAATGCGCATCGACGGTACAACTGGGATAGTAGACCAGTAc                                                                             >  2:356177/1‑93 (MQ=255)

             ttGATATCACTTATGACTGTGGTGATACTTCAAAGATTAAAAACTCGTTGCAAATGCGCATCGACGGTACAACTGGGATAGTAGACCAGTACa                                                                            <  2:299648/93‑1 (MQ=255)

             ttGATATCACTTATGACTGTGGTGATACTTCAAAGATTAAAAACTCGTTGCAAATGCGCATCGACGGTACAACTGGGATAGTAGACCAGTACa                                                                            <  2:4383480/93‑1 (MQ=255)

              tGATATCACTTATGACTGTGGTGATACTTCAAAGATTAAAAACTCGTTGCAAATGCGCATCGACGGTACAACTGGGATAGTAGACCAGTACaa                                                                           >  2:1919497/1‑93 (MQ=255)

               gATATCACTTATGACTGTGGTGATACTTCAAAGATTAAAAACTCGTTGCAAATGCGCATCGACGGTACAACTGGGATAGTAGACCAGTACAAc                                                                          <  1:9886216/93‑1 (MQ=255)

               gATATCACTTATGACTGTGGTGATACTTCAAAGATTAAAAACTCGTTGCAAATGCGCATCGACGGTACAACTGGGATAGTAGACCAGTACAAc                                                                          >  2:7783895/1‑93 (MQ=255)

                atatCACTTATGACTGTGGTGATACTTCAAAGATTAAAAACTCGTTGCAAATGCGCATCGACGGTACAACTGGGATAGTAGACCAGTACAAcc                                                                         <  1:3109709/93‑1 (MQ=255)

                 tatCACTTATGACTGTGGTGATACTTCAAAGATTAAAAACTCGTTGCAAATGCGCATCGACGGTACAACTGGGATAGTAGACCAGTACAACCt                                                                        <  2:8472100/93‑1 (MQ=255)

                  atCACTTATGACTGTGGTGATACTTCAAAGATTAAAAACTCGTTGCAAATGCGCATCGACGGTACAACTGGGATAGTAGACCAGTACAACCTg                                                                       <  1:1803446/93‑1 (MQ=255)

                  atCACTTATGACTGTGGTGATACTTCAAAGATTAAAAACTCGTTGCAAATGCGCATCGACGGTACAACTGGAGTAGTAGACCAGTACAACGTg                                                                       >  1:9609760/1‑93 (MQ=255)

                     aCTTATGACTGTGGTGATACTTCAAAGATTAAAAACTCGTTGCAAATGCGCATCGACGGTACAACTGGGATAGTAGACCAGTACAACCTGGTc                                                                    <  2:9545108/93‑1 (MQ=255)

                     aCTTATGACTGTGGTGATACTTCAAAGATTAAAAACTCGTTGCAAATGCGCATCGACGGTACAACTGGGATAGTAGACCAGTACAACCTGGTc                                                                    <  1:1350324/93‑1 (MQ=255)

                      cTTATGACTGTGGTGATACTTCAAAGATTAAAAACTCGTTGCAAATGCGCATCGACGGTACAACTGGGATAGTAGACCAGTACAACCTGGTCg                                                                   <  2:9756056/93‑1 (MQ=255)

                       ttATGACTGTGGTGATACTTCAAAGATTAAAAACTCGTTGCAAATGCGCATCGACGGTACAACTGGGATAGTAGACCAGTACAACCTGGTCGc                                                                  <  2:6300141/93‑1 (MQ=255)

                       ttATGACTGTGGTGATACTTCAAAGATTAAAAACTCGTTGCAAATGCGCATCGACGGTACAACTGGGATAGTAGACCAGTACAACCTGGTCGc                                                                  <  1:8617625/93‑1 (MQ=255)

                        tATGACTGTGGTGATACTTCAAAGATTAAAAACTCGTTGCAAATGCGCATCGACGGTACCACTGGGATAGTAGACCAGTACAACCTGGTCgtc                                                                 >  1:8192511/1‑91 (MQ=255)

                         aTGACTGTGGTGATACTTCAAAGATTAAAAACTCGTTGCAAATGCGCATCGACGGTACAACTGGGATAGTAGACCAGTACAACCTGGTCGCCa                                                                <  2:282550/93‑1 (MQ=255)

                         aTGACTGTGGTGATACTTCAAAGATTAAAAACTCGTTGCAAATGCGCATCGACGGTACAACTGGGATAGTAGACCAGTACAACCTGGTCGCCa                                                                <  2:7209744/93‑1 (MQ=255)

                         aTGACTGTGGTGATACTTCAAAGATTAAAAACTCGTTGCAAATGCGCATCGACGGTACAACTGGGATAGTAGACCAGTACAACCTGGTCGCCa                                                                >  1:8795520/1‑93 (MQ=255)

                         aTGACTGTGGTGATACTTCAAAGATTAAAAACTCGTTGCAAATGCGCATCGACGGTACAACTGGGATAGTAGACCAGTACAACCTGGTCGCCa                                                                >  2:7705192/1‑93 (MQ=255)

                           gACTGTGGTGATACTTCAAAGATTAAAAACTCGTTGCAAATGCGCATCGACGGTACAACTGGGATAGTAGACCAGTACAACCTGGTCGCCAgg                                                              <  2:3693883/93‑1 (MQ=255)

                            aCTGTGGTGATACTTCAAAGATTAAAAACTCGTTGCAAATGCGCATCGACGGTACAACTGGGATAGTAGACCAGTACAACCTGGTCGCCAGGc                                                             >  2:9635345/1‑93 (MQ=255)

                              tgtgGTGATACTTCAAAGATTAAAAACTTGTTGCAAATGCGCATCGACGGTACAACTGGGATAGTAGACCAGTACAACCTGGTCGCCAGGCga                                                           <  1:280097/93‑1 (MQ=255)

                              tgtgGTGATACTTCAAAGATTAAAAACTCGTTGCAAATGCGCATCGACGGTACAACTGGGATAGTAGACCAGTACAACCTGGTCGCCAGGCga                                                           <  1:2875870/93‑1 (MQ=255)

                                tggtgATACTTCAAAGATTAAAAACTCGTTGCAAATGCGCATCGACGGTACAACTGGGATAGTAGACCAGTACAACCTGGTCGCCAGGCgaag                                                         <  2:9462904/93‑1 (MQ=255)

                                tggtgATACTTCAAAGATTAAAAACTCGTTGCAAATGCGCATCGACGGTACAACTGGGATAGGAGACCAGTACAACCTGGTCGCCAGGCgaag                                                         >  1:3389766/1‑93 (MQ=255)

                                 ggtgATACTTCAAAGATTAAAAACTCGTTGCAAATGCGCATCGACGGTACAACTGGGATAGTAGACCAGTACAACCTGGTCGCCAGGCgaaga                                                        <  1:6667524/93‑1 (MQ=255)

                                  gtgATACTTCAAAGATTAAAAACTCGTTGCAAATGCGCATCGACGGTACAACTGGGATAGTAGACCAGTACAACCTGGTCGCCAGGCgaagaa                                                       >  1:9765937/1‑93 (MQ=255)

                                   tgATACTTCAAAGATTAAAAACTCGTTGCAAATGCGCATCGACGGTACAACTGGGATAGTAGACCAGTACAACCTGGTCGCCAGGCGaagaag                                                      >  1:5563324/1‑93 (MQ=255)

                                    gATACTTCAAAGATTAAAAACTCGTTGCAAATGCGCATCGACGGTACAACTGGGATAGTAGACCAGTACAACCTGGTCGCCAGGCGAAGAAGt                                                     <  2:6112911/93‑1 (MQ=255)

                                    gATACTTCAAAGATTAAAAACTCGTTGCAAATGCGCATCGACGGTACAACTGGGATAGTAGACCAGTACAACCTGGTCGCCAGGCGAAGAAGt                                                     >  1:8393265/1‑93 (MQ=255)

                                    gATACTTCAAAGATTAAAAACTCGTTGCAAATGCGCATCGACGGTACAACTGGGATAGTAGACCAGTACAACCTGGTCGCCAGGCGAAGAAGt                                                     <  2:231135/93‑1 (MQ=255)

                                      tACTTCAAAGATTAAAAACTCGTTGCAAATGCGCATCGACGGTACAACTGGGATAGTAGACCAGTACAACCTGGTCGCCAGGCGAAGAAGTTc                                                   >  2:625293/1‑93 (MQ=255)

                                      tACTTCAAAGATTAAAAACTCGTTGCAAATGCGCATCGACGGTACAACTGGGATAGTAGACCAGTACAACCTGGTCGCCAGGCGAAGAAGTTc                                                   >  1:7399469/1‑93 (MQ=255)

                                       aCTTCAAAGATTAAAAACTCGTTGCAAATGCGCATCGACGGTACAACTGGGATAGTAGACCAGTACAACCTGGTCGCCAGGCGAAGAAGTTCa                                                  >  2:166877/1‑93 (MQ=255)

                                         ttCAAAGATTAAAAACTCGTTGCAAATGCGCATCGACGGTACAACTGGGATAGTAGACCAGTACAACCTGGTCGCCAGGCGAAGAAGTTCAGa                                                >  2:3243798/1‑93 (MQ=255)

                                         ttCAAAGATTAAAAACTCGTTGCAAATGCGCATCGACGGTACAACTGGGATAGTAGACCAGTACAACCTGGTCGCCAGGCGAAGAAGTTCAGa                                                >  2:7367078/1‑93 (MQ=255)

                                            aaaGATTAAAAACTCGTTGCAAATGCGCATCGACGGTACAACTGGGATAGTAGACCAGTACAACCTGGTCGCCAGGCGAAGAAGTTCAGACaa                                             <  2:7915277/93‑1 (MQ=255)

                                            aaaGATTAAAAACTCGTTGCAAATGCGCATCGACGGTACAACTGGGATAGTAGACCAGTACAACCTGGTCGCCAGGCGAAGAAGTTCAGACaa                                             <  1:7203936/93‑1 (MQ=255)

                                            aaaGATTAAAAACTCGTTGCAAATGCGCATCGACGGTACAACTGGGATAGTAGACCAGTACAACCTGGTCGCCAGGCGAAGAAGTTCAGACaa                                             <  2:4883437/93‑1 (MQ=255)

                                            aaaGATTAAAAACTCGCTGCAAATGCGCATCGACGGTACACCTGGGATAGTAGACCAGTACAACCTGGTCGCCAGGCGAAGAAGTTCAGACaa                                             <  1:6791510/93‑1 (MQ=255)

                                             aaGATTAAAAACTCGTTGCAAATGCGCATCGACGGTACAACTGGGATAGTAGACCAGTACAACCTGGTCGCCAGGCGAAGAAGTTCAGACAAt                                            >  1:2547557/1‑93 (MQ=255)

                                               gATTAAAAACTCGTTGCAAATGCGCATCGACGGTACAACTGGGATAGTAGACCAGTACAACCTGGTCGCCAGGCGAAGAAGTTCAGACAAtgt                                          <  1:6456619/93‑1 (MQ=255)

                                               gATTAAAAACTCGTTGCAAATGCGCATCGACGGTACAACTGGGATAGTAGACCAGTACAACCTGGTCGCCAGGCGAAGAAGTTCAGACAAtgt                                          <  1:4118436/93‑1 (MQ=255)

                                               gATTAAAAACTCGTTGCAAATGCGCATCGACGGTACAACTGGGATAGTAGACCAGTACAACCTGGTCGCCAGGCGAAGAAGTTCAGACAAtgt                                          <  1:442096/93‑1 (MQ=255)

                                                  tAAAAACTCGTTGCAAATGCGCATCGACGGTACAACTGGGATAGTAGACCAGTACAACCTGGTCGCCAGGCGAAGAAGTTCAGACAATGTGcc                                       >  2:4176933/1‑93 (MQ=255)

                                                   aaaaaCTCGTTGCAAATGCGCATCGACGGTACAACTGGGATAGTAGACCAGTACAACCTGGTCGCCAGGCGAAGAAGTTCAGACAATGTGccc                                      >  2:2178953/1‑93 (MQ=255)

                                                    aaaaCTCGTTGCAAATGCGCATCGACGGTACAACTGGGATAGTAGACCAGTACAACCTGGTCGCCAGGCGAAGAAGTTCAGACAATGTGCCCg                                     >  1:963923/1‑93 (MQ=255)

                                                    aaaaCTCGTTGCAAATGCGCATCGACGGTACAACTGGGATAGTAGACCAGTACAACCTGGTCGCCAGGCGAAGAAGTTCAGACAATGTGCCCg                                     >  1:3435885/1‑93 (MQ=255)

                                                     aaaCTCGTTGCATATGCGCATCGACGGTACAACTGGGATAGTAGACCAGTACAACCTGGTCGCCAGGCGAAGAAGTTCAGACAATGTGCCCGa                                    <  1:5708081/93‑1 (MQ=255)

                                                     aaaCTCGTTGCAAATGCGCATCGACGGTACAACTGGGATAGTAGACCAGTACAACCTGGTCGCCAGGCGAAGAAGTTCAGACAATGTGCCCGa                                    <  1:8968487/93‑1 (MQ=255)

                                                      aaCTCGTTGCAAATGCGCATCGACGGTACAACTGGGATAGTAGACCAGTACAACCTGGTCGCCAGGCGAAGAAGTTCAGACAATGTGCCCGAt                                   <  1:5106459/93‑1 (MQ=255)

                                                        cTCGTTGCAAATGCGCATCGACGGTACAACTGGGATAGTAGACCAGTACAACCTGGTCGCCAGGCGAAGAAGTTCAGACAATGTGCCCGATGt                                 <  1:706072/93‑1 (MQ=255)

                                                          cGTTGCAAATGCGCATCGACGGTACAACTGGGATAGTAGACCAGTACAACCTGGTCGCCAGGCGAAGAAGTTCAGACAATGTGCCCGATGTCg                               <  1:2155712/93‑1 (MQ=255)

                                                          cGTTGCAAATGCGCATCGACGGTACAACTGGGATAGTAGACCAGTACAACCTGGTCGCCAGGCGAAGAAGTTCAGACAATGTGCCCGATGTCg                               >  1:7121547/1‑93 (MQ=255)

                                                           gTTGCAAATGCGCATCGACGGTACAACTGGGATAGTAGACCAGTACAACCTGGTCGCCAGGCGAAGAAGTTCAGACAATGTGCCCGATGTCgg                              >  1:3649380/1‑93 (MQ=255)

                                                           gTTGCAAATGCGCATCGACGGTACAACTGGGATAGTAGACCAGTACAACCTGGTCGCCAGGCGAAGAAGTTCAGACAATGTGCCCGATGTCgg                              >  2:9186333/1‑93 (MQ=255)

                                                           gTTGCAAATGCGCATCGACGGTACAACTGGGATAGTAGACCAGTACAACCTGGTCGCCAGGCGAAGAAGTTCAGACAATGTGCCCGATGTCgg                              >  1:6063335/1‑93 (MQ=255)

                                                              gCAAATGCGCATCGACGGTACAACTGGGATAGTAGACCAGTACAACCTGGTCGCCAGGCGAAGAAGTTCAGACAATGTGCCCGATGTCGGTAt                           >  2:3438958/1‑93 (MQ=255)

                                                                 aaTGCGCATCGACGGTACAACTGGGATAGTAGACCAGTACAACCTGGTCGCCAGGCGAAGAAGTTCAGACAATGTGCCCGATGTCGGTATTCg                        >  1:5376343/1‑93 (MQ=255)

                                                                   tGCGCATCGACGGTACAACTGGGATAGTAGACCAGTACAACCTGGTCGCCAGGCGAAGAAGTTCAGACAATGTGCCCGATGTCGGTATTCGTa                      <  2:132020/93‑1 (MQ=255)

                                                                   tGCGCATCGACGGTACAACTGGGATAGTAGACCAGTACAACCTGGTCGCCAGGCGAAGAAGTTCAGACAATGTGCCCGATGTCGGTATTCGTa                      >  1:4625607/1‑93 (MQ=255)

                                                                    gcgcATCGACGGTACAACTTGGATAGGAGACCAGTACAACCTGGTCGCCAGGCGAAGAAGTTCAGACAATGTGCCCGATGTCGGTATTCGTAt                     <  1:5207465/93‑1 (MQ=255)

                                                                       cATCGACGGTACAACTGGGATAGTAGACCAGTACAACCTGGTCGCCAGGCGAAGAAGTTCAGACAATGTGCCCGATGTCGGTATTCGTATTGa                  >  2:2546918/1‑93 (MQ=255)

                                                                        aTCGACGGTACAACTGGGATAGTAGACCAGTACAACCTGGTCGCCAGGCGAAGAAGTTCAGACAATGTGCCCGATGTCGGTATTCGTATTGaa                 <  1:6957242/93‑1 (MQ=255)

                                                                           gACGGTACAACTGGGATAGTAGACCAGTACAACCTGGTCGCCAGGCGAAGAAGTTCAGACAATGTGCCCGATGTCGGTATTCGTATTGAAAAt              >  1:381594/1‑93 (MQ=255)

                                                                           gACGGTACAACTGGGATAGTAGACCAGTACAACCTGGTCGCCAGGCGAAGAAGTTCAGACAATGTGCCCGATGTCGGTATTCGTATTGAAAAt              <  1:7346112/93‑1 (MQ=255)

                                                                            aCGGTACAACTGGGATAGTAGACCAGTACAACCTGGTCGCCAGGCGAAGAAGTTCAGACAATGTGCCCGATGTCGGTATTCGTATTGAAAAtc             <  1:4262030/93‑1 (MQ=255)

                                                                             cGGTACAACTGGGATAGTAGACCAGTACAACCTGGTCGCCAGGCGAAGAAGTTCAGACAATGTGCCCGATGTCGGTATTCGTATTGAAAAtct            <  1:9167133/93‑1 (MQ=255)

                                                                              ggTACAACTGGGATAGTAGACCAGTACAACCTGGTCGCCAGGCGAAGAAGTTCAGACAATGTGCCCGATGTCGGTATTCGTATTGAAAAtctc           <  2:8269154/93‑1 (MQ=255)

                                                                               gTACAACTGGGATAGTAGACCAGTACAACCTGGTCGCCAGGCGAAGAAGTTCAGACAATGTGCCCGATGTCGGTATTCGTATTGAAAATCTcg          >  1:4826460/1‑93 (MQ=255)

                                                                               gTACAACTGGGATAGTAGACCAGTACAACCTGGTCGCCAGGCGAAGAAGTTCAGACAATGTGCCCGATGTCGGTATTCGTATTGAAAATCTcg          <  2:5899545/93‑1 (MQ=255)

                                                                               gTACAACTGGGATAGTAGACCAGTACAACCTGGTCGCCAGGCGAAGAAGTTCAGACAATGTGCCCGATGTCGGTATTCGTATTGAAAATCTcg          >  1:1527439/1‑93 (MQ=255)

                                                                                tACAACTGGGATAGTAGACCAGTACAACCTGGTCGCCAGGCGAAGAAGTTCAGACAATGTGCCCGATGTCGGTATTCGTATTGAAAATCTcgg         >  2:4037682/1‑93 (MQ=255)

                                                                                  cAACTGGGATAGTAGACCAGTACAACCTGGTCGCCAGGCGAAGAAGTTCAGACAATGTGCCCGATGTCGGTATTCGTATTGAAAATCTcggcg       <  2:1045294/93‑1 (MQ=255)

                                                                                   aaCTGGGATAGTAGACCAGTACAACCTGGTCGCCAGGCGAAGAAGTTCAGACAATGTGCCCGATGTCGGTATTCGTATTGAAAATCTcggcgg      <  2:8839569/93‑1 (MQ=255)

                                                                                     cTGGGATAGTAGACCAGTACAACCTGGTCGCCAGGCGAAGAAGTTCAGACAATGTGCCCGATGTCGGTATTCGTATTGAAAATCTcggcggcg    >  1:6304345/1‑93 (MQ=255)

                                                                                     cTGGGATAGTAGACCAGTACAACCTGGTCGCCAGGCGAAGAAGTTCAGACAATGTGCCCGATGTCGGTATTCGTATTGAAAATCTcggcggcg    <  1:1195039/93‑1 (MQ=255)

                                                                                       gggaTAGTAGACCAGTACAACCTGGTCGCCAGGCGAAGAAGTTCAGACAATGTGCCCGATGTCGGTATTCGTATTGAAAATCTCGGCGGCGGa  <  1:934886/93‑1 (MQ=255)

ACTCCAGTAGACTTTGATATCACTTATGACTGTGGTGATACTTCAAAGATTAAAAACTCGTTGCAAATGCGCATCGACGGTACAACTGGGGTAGTAGACCAGTACAACCTGGTCGCCAGGCGAAGAAGTTCAGACAATGTGCCCGATGTCGGTATTCGTATTGAAAATCTCGGCGGCGGA  >  NC_000913/3289738‑3289917

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`