BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,295,175	T→C	Q202R (CAG→CGG)	yraQ ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,295,175	0	T	C	99.6%	875.7 / ‑5.0	274	Q202R (CAG→CGG)	yraQ	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/1); new base C (145/128); total (145/129)
Fisher's exact test for biased strand distribution p-value = 4.71e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.72e-01

Only 100 of 289 total aligned reads displayed.

ATCGTACTCCAGAAAAGCGTCCATAGCGCCCTGCCCCAGCGGCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCTGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATCAGCAACACCATCACCAGCCCGGCCACCAGACGAATCGCCGC  >  NC_000913/3295085‑3295263

    tACTCCAGAAAAGCGTCCATAGCGCCCTGCCCCAGCGGCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGttt                                                                                    >  2:9639941/1‑93 (MQ=255)

    tACTCCAGAAAAGCGTCCATAGCGCCCTGCCCCAGCGGCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGttt                                                                                    >  2:7102262/1‑93 (MQ=255)

      cTCCAGAAAAGCGTCCATAGCGCCCTGCCCCAGCGGCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGc                                                                                  >  1:3881456/1‑93 (MQ=255)

       tCCAGAAAAGCGTCCATAGCGCCCTGCCCCAGCGGCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCg                                                                                 >  1:1529705/1‑93 (MQ=255)

        ccAGAAAGGCGTCCATAGCGCCCTGCCCCAGCGGCTAAAAAACCCGCCTTGTGCTTCCGGTATGTCAATGTCGACCGGTGCCCGCGTTTGCgg                                                                                <  2:264673/93‑1 (MQ=255)

        ccAGAAAAGCGTCCATAGCGCCCTGCCCCAGCGGCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCgg                                                                                >  2:624882/1‑93 (MQ=255)

        ccAGAAAAGCGTCCATAGCGCCCTGCCCCAGCGGCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCgg                                                                                <  1:5358167/93‑1 (MQ=255)

            aaaaGCGTCCATAGCGCCCTGCCCCAGCGGCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGtt                                                                            <  2:8375317/93‑1 (MQ=255)

              aaGCGTCCATAGCGCCCTGCCCCAGCGGCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTc                                                                          >  2:3920965/1‑93 (MQ=255)

              aaGCGTCCATAGCGCCCTGCCCCAGCGGCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTc                                                                          >  2:3597073/1‑93 (MQ=255)

               aGCTTCCATAGCGCCCTGCCCCAGCGGCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCa                                                                         <  1:2599150/93‑1 (MQ=255)

               aGCGTCCATAGCGCCCTGCCCCAGCGGCTAAAAACCCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCa                                                                         <  2:9661540/93‑1 (MQ=255)

               aGCGTCCATAGCGCCCTGCCCCAGCGGCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCa                                                                         >  2:4100429/1‑93 (MQ=255)

               aGCGTCCATAGCGCCCTGCCCCAGCGGCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCa                                                                         <  2:5480932/93‑1 (MQ=255)

                gCGTCCATAGCGCCCTGCCCCAGCGGCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCAc                                                                        >  1:942470/1‑93 (MQ=255)

                gCGTCCATAGCGCCCTGCCCCAGCGGCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCAc                                                                        <  2:2416592/93‑1 (MQ=255)

                gCGTCCATAGCGCCCTGCCCCAGCGGCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCAc                                                                        >  1:6565895/1‑93 (MQ=255)

                   tCCATAGCGCCCTGCCCCAGCGGCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCa                                                                     >  2:8601011/1‑93 (MQ=255)

                   tCCATAGCGCCCTGCCCCAGCGGCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCa                                                                     >  2:5372308/1‑93 (MQ=255)

                    ccATAGCGCCCTGCCCCAGCGGCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCAc                                                                    >  2:227925/1‑93 (MQ=255)

                     cATAGCGCCCTGCCCCAGCGGCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCAcc                                                                   >  1:8074632/1‑93 (MQ=255)

                     cATAGCGCCCTGCCCCAGCGGCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCAcc                                                                   <  1:9169759/93‑1 (MQ=255)

                      aTAGCGCCCTGCCCCAGCGGCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCAccc                                                                  >  1:3617349/1‑93 (MQ=255)

                      aTAGCGCCCTGCCCCAGCGGCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCAccc                                                                  >  1:8612269/1‑93 (MQ=255)

                      aTAGCGCCCTGCCCCAGCGGCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCAccc                                                                  >  2:3667775/1‑93 (MQ=255)

                      aTAGCGCCCTGCCCCAGCGGCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCAccc                                                                  >  1:8981053/1‑93 (MQ=255)

                      aTAGCGCCCTGCCCCAGCGGCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCAccc                                                                  <  2:6104419/93‑1 (MQ=255)

                       tAGCGCCCTGCCCCAGCGTCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCa                                                                 <  2:6169761/93‑1 (MQ=255)

                       tAGCGCCCTGCCCCAGCGGCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCAcccc                                                                 >  1:2944576/1‑92 (MQ=255)

                       tAGCGCCCTGCCCCAGCGGCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCa                                                                 >  2:6524102/1‑93 (MQ=255)

                       tAGCGCCCTGCCCCAGCGGCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCa                                                                 >  2:1449350/1‑93 (MQ=255)

                         gcgcCCTGCCCCAGCGGCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCAtt                                                               >  2:1683271/1‑93 (MQ=255)

                           gcCCTGCCCCAGCGGCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCAtttt                                                             <  1:9808009/93‑1 (MQ=255)

                            cccTGCCCCAGCGGCTAAAAACCCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCAttttt                                                            <  2:1107263/93‑1 (MQ=255)

                            cccTGCCCCAGCGGCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCAttttt                                                            <  1:5466171/93‑1 (MQ=255)

                            cccTGCCCCAGCGGCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCAttttt                                                            >  1:1556100/1‑93 (MQ=255)

                            cccTGCCCCAGCGGCTAAAAAACCCGCACTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGTGTTTGCGGTGTTTCACGAACCCAttttt                                                            >  1:4531398/1‑93 (MQ=255)

                             ccTGCCCCAGCGGCTAAAAAACCCGCCCTGTGCCTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTg                                                           >  2:706272/1‑93 (MQ=255)

                                gCCCCAGCGGCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCAc                                                        <  1:7638155/93‑1 (MQ=255)

                                 ccccAGCGGCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCAcc                                                       <  1:578176/93‑1 (MQ=255)

                                   ccAGCGGCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCGATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAg                                                     >  2:6801077/1‑93 (MQ=255)

                                       cGGCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTc                                                 >  2:876665/1‑93 (MQ=255)

                                        ggCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCg                                                >  1:7431937/1‑93 (MQ=255)

                                         gCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGc                                               <  2:8300280/93‑1 (MQ=255)

                                         gCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGc                                               >  2:814518/1‑93 (MQ=255)

                                         gCTAAAAAACCCCCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGc                                               <  2:951704/93‑1 (MQ=255)

                                          cTAAAAAACCCGCGCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCa                                              >  1:6721304/1‑93 (MQ=255)

                                          cTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCa                                              >  1:5033390/1‑93 (MQ=255)

                                           tAAAAAGCCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCaa                                             <  2:8836124/93‑1 (MQ=255)

                                           tAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCaa                                             >  2:2801127/1‑93 (MQ=255)

                                           tAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCaa                                             >  2:9562041/1‑93 (MQ=255)

                                           tAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCaa                                             <  2:1219694/93‑1 (MQ=255)

                                            taaaaaCCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAAt                                            <  1:2291187/92‑1 (MQ=255)

                                             aaaaaCCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATc                                           >  1:7071881/1‑93 (MQ=255)

                                                aaCCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATCAGc                                        <  1:9229646/93‑1 (MQ=255)

                                                aaCCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATCAGc                                        <  1:8898016/93‑1 (MQ=255)

                                                 aCCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATCAGCa                                       >  1:1012726/1‑93 (MQ=255)

                                                  cccGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATCAGCaa                                      <  1:5593967/93‑1 (MQ=255)

                                                  cccGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATCAGCaa                                      >  1:6277521/1‑93 (MQ=255)

                                                  cccGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATCAGCaa                                      <  2:5837584/93‑1 (MQ=255)

                                                     gCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATCAGCAacac                                   <  1:9056320/93‑1 (MQ=255)

                                                     gCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATCAGCAacac                                   >  1:4115806/1‑93 (MQ=255)

                                                     ccccTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATCAGCAacac                                   <  2:3402017/92‑1 (MQ=255)

                                                      cccTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATCAGCAACAcc                                  >  2:1886024/1‑93 (MQ=255)

                                                      cccTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATCAGCAACAcc                                  >  1:5000541/1‑93 (MQ=255)

                                                       ccTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATCAGCAACACCa                                 >  2:8508294/1‑93 (MQ=255)

                                                        cTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCTGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATCAGCAACACCAt                                <  1:3278130/93‑1 (MQ=255)

                                                        cTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATCAGCAACACCAt                                >  1:8237928/1‑93 (MQ=255)

                                                        cTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATCAGCAACACCAt                                >  1:6973442/1‑93 (MQ=255)

                                                        cTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCATCGCAATCAGCAACACCAt                                <  1:9944861/93‑1 (MQ=255)

                                                         tttgCTTCCGGTATGCCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATCAGCAACACCATc                               <  2:7336133/91‑1 (MQ=255)

                                                         tgtgCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATCAGCAACACCATc                               >  1:7904443/1‑93 (MQ=255)

                                                         tgtgCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATCAGCAACACCATc                               >  2:1536589/1‑93 (MQ=255)

                                                          gtgCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATCAGCAACACCATcc                              >  1:3394351/1‑92 (MQ=255)

                                                          gtgCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATCAGCAACACCATCa                              <  2:4309010/93‑1 (MQ=255)

                                                           tgCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATCAGCAACACCATTAc                             <  1:4840616/93‑1 (MQ=255)

                                                           tgCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATCAGCAACACCATCAc                             >  1:689632/1‑93 (MQ=255)

                                                            gCTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATCAGCAACACCATCAcc                            <  1:10017753/93‑1 (MQ=255)

                                                             cTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATCAGCAACACCATCACCa                           >  2:4613366/1‑93 (MQ=255)

                                                             cTTCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATCAGCAACACCATCACCa                           <  1:242329/93‑1 (MQ=255)

                                                              ttCCGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATCAGCAACACCATCACCAg                          >  1:4352505/1‑93 (MQ=255)

                                                                 cGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATCAGCAACACCATCACCAGccc                       >  2:7753351/1‑93 (MQ=255)

                                                                 cGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATCAGCAACACCATCACCAGccc                       <  1:3726117/93‑1 (MQ=255)

                                                                 cGGTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATCAGCAACACCATCACCAGccc                       <  2:4000370/93‑1 (MQ=255)

                                                                  ggTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATCAGCAACACCATCACCAGCCCg                      <  1:5934302/93‑1 (MQ=255)

                                                                  ggTATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATCAGCAACACCATCACCAGCCCg                      <  2:9369731/93‑1 (MQ=255)

                                                                    tATGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATCAGCAACACCATCACCAGCCCGGc                    <  1:7224507/93‑1 (MQ=255)

                                                                      tGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATCAGCAACACCATCACCAGCCCGGcca                  >  2:9208063/1‑93 (MQ=255)

                                                                      tGTCAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATCAGCAACACCATCACCAGCCCGGcca                  >  1:862561/1‑93 (MQ=255)

                                                                         cAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATCAGCAACACCATCACCAGCCCGGccacca               >  1:1926814/1‑93 (MQ=255)

                                                                         cAATTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATCAGCAACACCATCACCAGCCCGGccacca               <  1:2123053/93‑1 (MQ=255)

                                                                          aaTTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATCAGCAACACCATCACCAGCCCGGCCACCAg              <  1:4620487/93‑1 (MQ=255)

                                                                           atgtCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATCAGCAACACCATCACCAGCCCGGCCACCAGa             <  1:6064643/90‑1 (MQ=255)

                                                                           aTTTCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATCAGCAACACCATCACCAGCCCGGCCACCAGa             <  2:7467796/93‑1 (MQ=255)

                                                                            tttCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATCAGCAACACCATCACCAGCCCGGCCACCAGAc            <  2:4059558/93‑1 (MQ=255)

                                                                            tttCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATCAGCAACACCATCACCAGCCCGGCCACCAGAc            <  2:762695/93‑1 (MQ=255)

                                                                            tttCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATCAGCAACACCATCACCAGCCCGGCCACCAGAc            <  1:1276512/93‑1 (MQ=255)

                                                                              tCGACCGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATCAGCAACACCATCACCAGCCCGGCCACCAGACGa          <  1:9639942/93‑1 (MQ=255)

                                                                                   cGGTGCCCGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATCAGCAACACCATCACCAGCCCGGCCACCAGACGAATcgc     <  2:5163918/93‑1 (MQ=255)

                                                                                    ggTGCCCGCGTTTGCGGTGTTTCCCGCACCCCTTTTTGCACCGGCGTCGCCCTCCGCCACACCTTCACCGGCCCGGCCACCCGACGCCTcgcc    <  1:7725315/93‑1 (MQ=255)

ATCGTACTCCAGAAAAGCGTCCATAGCGCCCTGCCCCAGCGGCTAAAAAACCCGCCCTGTGCTTCCGGTATGTCAATTTCGACCGGTGCCTGCGTTTGCGGTGTTTCACGCACCCATTTTTGCACCAGCGTCGCAATCAGCAACACCATCACCAGCCCGGCCACCAGACGAATCGCCGC  >  NC_000913/3295085‑3295263

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`