Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,316,615 T→C M113T (ATG→ACG)  argG → argininosuccinate synthetase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,316,6150TC99.5% 1326.2 / ‑4.7 410M113T (ATG→ACG) argGargininosuccinate synthetase
Reads supporting (aligned to +/- strand):  ref base T (1/1);  new base C (206/202);  total (207/203)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.91e-01

Only 100 of 423 total aligned reads displayed.

CCGCTATTCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCATGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTCTATCGTTA  >  NC_000913/3316525‑3316705
                                                                                          |                                                                                          
ccGCTATTCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGc                                                                                          >  2:6969120/1‑93 (MQ=255)
   cTATTCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTgg                                                                                       <  2:3731957/93‑1 (MQ=255)
     aTTCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGtt                                                                                     <  2:7838898/93‑1 (MQ=255)
     aTTCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGGGACTGGTACCCCCCTGGtt                                                                                     >  2:3858218/1‑93 (MQ=255)
      ttCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTCTTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTtg                                                                                    >  1:1761398/1‑93 (MQ=255)
       tCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTtgc                                                                                   >  1:7340024/1‑93 (MQ=255)
          gtgtGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTtgctgc                                                                                <  1:4494256/93‑1 (MQ=255)
           tgtgGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCg                                                                               >  1:5654327/1‑93 (MQ=255)
             tgGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGAt                                                                             <  2:8412056/93‑1 (MQ=255)
              ggCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATg                                                                            <  1:3581646/93‑1 (MQ=255)
              ggCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATg                                                                            >  2:8562500/1‑93 (MQ=255)
                cgcATTTCATAACACCACCGGCGGCCTGACCTATTTCAACGCGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGaa                                                                          <  1:9107848/93‑1 (MQ=255)
                cgcATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGaa                                                                          <  1:6369299/93‑1 (MQ=255)
                 gcATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGaaa                                                                         >  2:3527628/1‑93 (MQ=255)
                 gcATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGaaa                                                                         <  1:4262572/93‑1 (MQ=255)
                 gcATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGaaa                                                                         <  1:9705500/93‑1 (MQ=255)
                  cATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAaag                                                                        >  2:6639973/1‑93 (MQ=255)
                  cATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAaag                                                                        <  1:8291460/93‑1 (MQ=255)
                    tttCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAaagaa                                                                      <  2:588831/93‑1 (MQ=255)
                    tttCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAaagaa                                                                      <  1:4034155/93‑1 (MQ=255)
                      tCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAagaaga                                                                    >  1:7808409/1‑93 (MQ=255)
                      tCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAagaaga                                                                    <  2:4920208/93‑1 (MQ=255)
                      tCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAagaaga                                                                    <  2:8867220/93‑1 (MQ=255)
                      tCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAagaaga                                                                    <  1:3757825/93‑1 (MQ=255)
                      tCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAagaaga                                                                    <  2:4410469/93‑1 (MQ=255)
                        aTAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATg                                                                  >  2:1153464/1‑93 (MQ=255)
                        aTAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATg                                                                  >  2:6912901/1‑93 (MQ=255)
                         tAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATgg                                                                 >  1:9444888/1‑93 (MQ=255)
                          aaCACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGc                                                                <  2:2779609/93‑1 (MQ=255)
                            caccacCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGt                                                              >  1:6177493/1‑93 (MQ=255)
                             accaccGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTg                                                             <  2:164040/93‑1 (MQ=255)
                             accaccGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTg                                                             >  1:10028831/1‑93 (MQ=255)
                                 ccGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAata                                                         >  2:2207182/1‑93 (MQ=255)
                                 ccGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAata                                                         <  2:9095745/93‑1 (MQ=255)
                                 ccGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAata                                                         <  1:251990/93‑1 (MQ=255)
                                  cggcggCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAatat                                                        <  1:2772893/93‑1 (MQ=255)
                                   ggcggcCTGACCTATTTCAACACTACGCCGCTGGGTCGCGACGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGAGGGGGTGAatatt                                                       >  2:8179821/1‑92 (MQ=255)
                                      ggcCTGACCTATTTCAACACGACGCCTCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGTCGTGAATATCTgg                                                    <  2:10038230/93‑1 (MQ=255)
                                       gcCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTggg                                                   >  1:1467258/1‑93 (MQ=255)
                                       gcCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGATGCGATGAAAGAAGATGGCGTGAATATCTggg                                                   >  2:9568021/1‑93 (MQ=255)
                                          tGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTg                                                >  2:4295651/1‑93 (MQ=255)
                                          tGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTg                                                >  1:9855701/1‑93 (MQ=255)
                                           gACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGa                                               >  1:6471267/1‑93 (MQ=255)
                                            aCCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGAc                                              >  2:2479576/1‑93 (MQ=255)
                                             ccTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACg                                             >  2:7984765/1‑93 (MQ=255)
                                              cTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACgg                                            <  2:2121371/93‑1 (MQ=255)
                                              cTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACgg                                            <  1:5525119/93‑1 (MQ=255)
                                               tATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAACGAAGATTGCGTGAATATCTGGTGTTACGGt                                           >  1:6646609/1‑93 (MQ=255)
                                               tATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGt                                           >  2:2980259/1‑93 (MQ=255)
                                               tATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGt                                           >  2:539687/1‑93 (MQ=255)
                                               tATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGt                                           >  1:8740452/1‑93 (MQ=255)
                                               tATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGt                                           <  1:8810243/93‑1 (MQ=255)
                                                 tttCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAg                                         <  2:472893/93‑1 (MQ=255)
                                                 tttCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAg                                         >  2:3096589/1‑93 (MQ=255)
                                                    cAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCAc                                      <  1:7240097/93‑1 (MQ=255)
                                                     aaCACGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCAcc                                     <  1:4516778/93‑1 (MQ=255)
                                                      acacGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCt                                    >  2:6258580/1‑93 (MQ=255)
                                                      acacGACGCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCt                                    <  1:2134524/93‑1 (MQ=255)
                                                          gacgCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGCTGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACaa                                >  2:6007933/1‑93 (MQ=255)
                                                          gacgCCGCTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACaa                                >  1:4918019/1‑93 (MQ=255)
                                                            cgccgcTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAg                              <  1:2859288/93‑1 (MQ=255)
                                                            cgccgcTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAg                              >  1:7699666/1‑93 (MQ=255)
                                                             gccgcTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAgg                             >  2:4117180/1‑93 (MQ=255)
                                                              ccgcTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGCCGGTAGCCACTACAAAGGa                            >  1:1905279/1‑93 (MQ=255)
                                                              ccgcTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGa                            >  1:9965786/1‑93 (MQ=255)
                                                               cgcTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGaa                           <  1:2034406/93‑1 (MQ=255)
                                                                gcTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGaaa                          <  1:2423875/93‑1 (MQ=255)
                                                                gcTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGaaa                          >  2:5547608/1‑93 (MQ=255)
                                                                 cTGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAAc                         <  2:9745567/93‑1 (MQ=255)
                                                                  tGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGACACg                        >  1:1272796/1‑93 (MQ=255)
                                                                  tGGGCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACg                        <  1:6949167/93‑1 (MQ=255)
                                                                   gggCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGa                       <  2:4371346/93‑1 (MQ=255)
                                                                    ggCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACGAAGGAAACGat                      <  2:4547167/93‑1 (MQ=255)
                                                                     gCCGCGCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGata                     <  1:3152325/93‑1 (MQ=255)
                                                                       cgcgCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATc                   <  1:7455794/93‑1 (MQ=255)
                                                                       cgcgCCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATc                   >  2:1417663/1‑93 (MQ=255)
                                                                          gcCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGaa                >  1:1152231/1‑93 (MQ=255)
                                                                          gcCGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGaa                <  1:3350698/93‑1 (MQ=255)
                                                                           ccGTGCCTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAAc               >  2:3960091/1‑93 (MQ=255)
                                                                           ccGTGACTGGTACCACGCTGGTTGCTGCGATGTAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAAc               >  2:2856709/1‑93 (MQ=255)
                                                                           ccGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAAc               <  2:5194439/93‑1 (MQ=255)
                                                                            cGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGGAACGATATCGAACg              >  1:5876814/1‑93 (MQ=255)
                                                                            cGTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACg              >  1:8403635/1‑93 (MQ=255)
                                                                             gTGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGt             <  2:9768623/93‑1 (MQ=255)
                                                                              tGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGtt            >  1:7140560/1‑93 (MQ=255)
                                                                              tGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGtt            <  2:9515113/93‑1 (MQ=255)
                                                                              tGACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGtt            <  1:8517623/93‑1 (MQ=255)
                                                                               gACTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGttt           <  2:8130165/93‑1 (MQ=255)
                                                                                aCTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTc          <  2:7161733/93‑1 (MQ=255)
                                                                                 cTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTCt         <  1:4699087/93‑1 (MQ=255)
                                                                                 cTGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTCt         >  1:2670654/1‑93 (MQ=255)
                                                                                  tGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGACAGTTTCTa        >  2:7566525/1‑93 (MQ=255)
                                                                                  tGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTCTa        >  2:7308909/1‑93 (MQ=255)
                                                                                  tGGTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTCTa        <  1:2169503/93‑1 (MQ=255)
                                                                                   ggTACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTCTAt       >  1:2971914/1‑93 (MQ=255)
                                                                                     tACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGACATCGAACGTTTCTATCg     >  1:2328634/1‑93 (MQ=255)
                                                                                     tACCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGGGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTCTATCg     >  1:3925445/1‑93 (MQ=255)
                                                                                      aCCACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTCTATCGt    >  1:5161628/1‑93 (MQ=255)
                                                                                       ccACGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTCTATCGtt   >  1:5292656/1‑93 (MQ=255)
                                                                                        cATGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTCTATCGTTa  >  1:7880540/1‑93 (MQ=255)
                                                                                          |                                                                                          
CCGCTATTCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCATGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTCTATCGTTA  >  NC_000913/3316525‑3316705

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: