BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,359,299	T→C	G163G (GGT→GGC)	gltF →	GltF

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,359,299	0	T	C	99.8%	1534.8 / NA	477	G163G (GGT→GGC)	gltF	GltF
Reads supporting (aligned to +/- strand): ref base T (1/0); new base C (242/232); total (244/233)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 490 total aligned reads displayed.

AGGTTCTGCGCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGTGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGGCGCATTCTGCTCGCT  >  NC_000913/3359209‑3359388

aGGTTCTGCGCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGa                                                                                         >  2:6116710/1‑93 (MQ=255)

aGGTTCTGCGCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGa                                                                                         >  1:8143955/1‑93 (MQ=255)

 ggTTCCGCGCCTAATGGACAAAAAATTGGTGCTGCATCCATTGGTATAGACAGGTCTAAAGGTGGGATTCACGCGGCGGACGATACAGGCGaa                                                                                        >  1:8965899/1‑93 (MQ=255)

  gTTCTGCGCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGaaa                                                                                       <  2:8883005/93‑1 (MQ=255)

  gTTCTGCGCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGaaa                                                                                       <  2:7768378/93‑1 (MQ=255)

  gTTCTGCGCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGaaa                                                                                       <  2:7713369/93‑1 (MQ=255)

  gTTCTGCGCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGaaa                                                                                       <  2:5480641/93‑1 (MQ=255)

  gTTCTGCGCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGaaa                                                                                       <  2:2469516/93‑1 (MQ=255)

   ttCTGCGCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAAt                                                                                      >  1:1067830/1‑93 (MQ=255)

    tCTGCGCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAAtt                                                                                     >  2:5005355/1‑93 (MQ=255)

     cTGCGCCTAATGGGCAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTc                                                                                    <  1:9340165/93‑1 (MQ=255)

      tGCGCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTcc                                                                                   >  1:9270986/1‑93 (MQ=255)

      tGCGCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTcc                                                                                   <  1:5754052/93‑1 (MQ=255)

        cgcCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTg                                                                                 >  1:9520640/1‑93 (MQ=255)

         gcCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGt                                                                                <  1:2132603/93‑1 (MQ=255)

            tAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGa                                                                             >  2:9807874/1‑93 (MQ=255)

             aaTGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGAc                                                                            <  2:2172650/93‑1 (MQ=255)

             aaTGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGAc                                                                            >  1:7709719/1‑93 (MQ=255)

             aaTGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGAc                                                                            <  1:4155769/93‑1 (MQ=255)

              aTGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGAcc                                                                           >  1:6153277/1‑93 (MQ=255)

               tGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCt                                                                          >  2:7139138/1‑93 (MQ=255)

                    aaaaaaTTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTACTGTCGACCTGATTc                                                                     >  1:7501968/1‑93 (MQ=255)

                     aaaaaTTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCa                                                                    >  2:6276926/1‑93 (MQ=255)

                      aaaaTTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCaa                                                                   >  1:8624971/1‑93 (MQ=255)

                       aaaTTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCaaa                                                                  >  1:5677042/1‑93 (MQ=255)

                           tGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGa                                                              <  2:2838712/93‑1 (MQ=255)

                           tGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGa                                                              <  2:6891865/93‑1 (MQ=255)

                            ggCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGAc                                                             <  1:1812573/93‑1 (MQ=255)

                            ggCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGAc                                                             <  2:3461039/93‑1 (MQ=255)

                            ggCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGAc                                                             <  1:4384939/93‑1 (MQ=255)

                             gcgcTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGAcc                                                            <  1:91436/93‑1 (MQ=255)

                             gcgcTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGAcc                                                            >  1:8739491/1‑93 (MQ=255)

                              cgcTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCa                                                           <  1:4840403/93‑1 (MQ=255)

                               gcTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCAc                                                          >  1:5179651/1‑93 (MQ=255)

                               gcTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCAc                                                          <  2:3974068/93‑1 (MQ=255)

                                cTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACt                                                         <  2:1193368/93‑1 (MQ=255)

                                cTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACt                                                         <  1:2734885/93‑1 (MQ=255)

                                   cATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGt                                                      <  1:3142102/93‑1 (MQ=255)

                                    aTCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTc                                                     >  1:100809/1‑93 (MQ=255)

                                     tCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGt                                                                                >  1:7940983/1‑65 (MQ=255)

                                     tCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTca                                                    <  2:1367108/93‑1 (MQ=255)

                                     tCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTca                                                    <  1:3912175/93‑1 (MQ=255)

                                       cATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTcagc                                                  <  2:2514487/93‑1 (MQ=255)

                                        aTTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTcagca                                                 <  1:2932563/93‑1 (MQ=255)

                                        aTTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTcagca                                                 >  2:7888007/1‑93 (MQ=255)

                                          tGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCagcagc                                               >  1:6332214/1‑93 (MQ=255)

                                            gTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGa                                             >  2:8227856/1‑93 (MQ=255)

                                            gTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGa                                             >  1:1206192/1‑93 (MQ=255)

                                            gTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGa                                             >  2:846307/1‑93 (MQ=255)

                                            gTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCAACCTGATTCAAACTGACCACTGGGGAGCAGCGa                                             >  2:3808535/1‑93 (MQ=255)

                                             tATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGAc                                            >  2:6595184/1‑93 (MQ=255)

                                             tATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGAc                                            <  2:1972502/93‑1 (MQ=255)

                                             tATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGAc                                            <  2:4152970/93‑1 (MQ=255)

                                              aTTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGAcc                                           >  1:8263691/1‑93 (MQ=255)

                                               ttGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACGACTGGTCAGCAGCGAccc                                          >  1:6783472/1‑93 (MQ=255)

                                               ttGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGAccc                                          <  1:8820138/93‑1 (MQ=255)

                                               ttGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGAccc                                          >  2:9216678/1‑93 (MQ=255)

                                                 gACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGAccccc                                        >  1:4965408/1‑93 (MQ=255)

                                                  aCAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGAcccccc                                       >  2:7354396/1‑92 (MQ=255)

                                                  aCAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCca                                       >  2:1693508/1‑93 (MQ=255)

                                                    aGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCcaca                                     <  1:7323575/93‑1 (MQ=255)

                                                    aGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCcaca                                     >  1:5517091/1‑93 (MQ=255)

                                                    aGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCcaca                                     <  2:4638795/93‑1 (MQ=255)

                                                     ggTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACAt                                    <  1:650685/93‑1 (MQ=255)

                                                     ggTCTAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACAt                                    >  2:6398358/1‑93 (MQ=255)

                                                         tAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGaa                                <  1:3312494/93‑1 (MQ=255)

                                                         tAATGGTGGGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGaa                                <  1:4584228/93‑1 (MQ=255)

                                                            tggtggGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGc                             >  1:402740/1‑93 (MQ=255)

                                                            tggtggGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTAGTCAGCAGCGACCCCCACATGGAAAGc                             >  1:2391427/1‑93 (MQ=255)

                                                              gtggGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCt                           >  2:7602592/1‑93 (MQ=255)

                                                              gtggGATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCt                           >  2:6818592/1‑93 (MQ=255)

                                                                gggATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCa                         <  2:94519/93‑1 (MQ=255)

                                                                  gATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATc                       <  1:6991426/93‑1 (MQ=255)

                                                                  gATTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATc                       <  1:1437144/93‑1 (MQ=255)

                                                                   aTTCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCt                      <  2:3148915/93‑1 (MQ=255)

                                                                    ttCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTa                     >  1:6204992/1‑93 (MQ=255)

                                                                     tCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTaa                    <  2:534573/93‑1 (MQ=255)

                                                                     tCACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTaa                    >  2:580839/1‑93 (MQ=255)

                                                                      cACGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAAt                   <  2:4851489/93‑1 (MQ=255)

                                                                       aCGCGGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATg                  >  1:7628522/1‑93 (MQ=255)

                                                                       aCGCGGCGAACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATg                  <  1:9885983/93‑1 (MQ=255)

                                                                        cgcgGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATgg                 >  2:1847843/1‑93 (MQ=255)

                                                                        cgcgGCGGACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCAACATGGAAAGCCTCATCTAATgg                 >  1:3551420/1‑93 (MQ=255)

                                                                         gcggctGACGATACAGGCGAAAGTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGgc                <  2:5641752/93‑1 (MQ=255)

                                                                             cggACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCATTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGGCGCAt            <  2:6002098/93‑1 (MQ=255)

                                                                             cggACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGGCGCAt            <  2:5192500/93‑1 (MQ=255)

                                                                              ggACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGGCGCAtc           >  1:5943288/1‑92 (MQ=255)

                                                                               gACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGGCGCATTc          <  1:2572660/93‑1 (MQ=255)

                                                                               gACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGGCGCATTc          >  1:4310115/1‑93 (MQ=255)

                                                                               gACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGGCGCATTc          <  2:4364247/93‑1 (MQ=255)

                                                                               gACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGGCGCATTc          >  2:9363989/1‑93 (MQ=255)

                                                                               gACGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGGCGCATTc          <  2:2690139/93‑1 (MQ=255)

                                                                                aCGATACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGGCGCATTCt         <  1:3793219/93‑1 (MQ=255)

                                                                                   aTACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGGCGCATTCTGCt      <  2:4471946/93‑1 (MQ=255)

                                                                                   aTACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGGCGCATTCTGCt      >  1:1470545/1‑93 (MQ=255)

                                                                                   aTACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGGCGCATTCTGCt      <  1:3819922/93‑1 (MQ=255)

                                                                                    tACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGGCGCATTCTGCTc     >  1:8477158/1‑93 (MQ=255)

                                                                                    tACAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGGCGCATTCTGCTc     <  2:230189/93‑1 (MQ=255)

                                                                                     aCAGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGGCGCATTCTGCTCg    >  1:9934850/1‑93 (MQ=255)

                                                                                       aGGCGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGGCGCATTCTGCTCGCt  >  1:4673512/1‑93 (MQ=255)

AGGTTCTGCGCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGTGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGGCGCATTCTGCTCGCT  >  NC_000913/3359209‑3359388

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`