BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	405,539	A→G	intergenic (+93/‑90)	yaiI → / → aroL	hypothetical protein/shikimate kinase II

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	405,539	0	A	G	100.0%	1580.0 / NA	475	intergenic (+93/‑90)	yaiI/aroL	hypothetical protein/shikimate kinase II
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (264/211); total (264/211)

Only 100 of 477 total aligned reads displayed.

GTAATTTATTATTTACACTTCATTCTTGAATATTTATTGGTATAGTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTACAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCATGACACCGGCTTTCGCCGCATTGCGACCTATTGGGGAAAACCCACG  >  NC_000913/405449‑405628

gTAATTTATTATTTACACTTCATTCTTGAATATTTATTGGTATAGTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCa                                                                                         >  1:8811532/1‑93 (MQ=255)

 tAATTTATTATTTACACTTCATTCTTGAATATTTATTGGTATAGTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCaa                                                                                        <  2:3987271/93‑1 (MQ=255)

 tAATTTATTATTTACACTTCATTCTTGAATATTTATTGGTATAGTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCaa                                                                                        >  2:6958561/1‑93 (MQ=255)

  aaTTTATTATTTACACTTCATTCTTGAATATTTATTGGTATAGTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAAt                                                                                       <  1:3148008/93‑1 (MQ=255)

   aTTTATTATTTACACTTCATTCTTGAATATTTATTGGTATAGTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATc                                                                                      >  1:2734305/1‑93 (MQ=255)

    tttATTATTTACACTTCATTCTTGAATATTTATTGGTATAGTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCg                                                                                     >  2:4961608/1‑93 (MQ=255)

    tttATTATTTACACTTCATTCTTGAATATTTATTGGTATAGTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCg                                                                                     >  2:5127214/1‑93 (MQ=255)

      tattatTTACACTTCATTCTTGAATATTTATTGGTATAGTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGaa                                                                                   >  1:9528840/1‑93 (MQ=255)

      tattatTTACACTTCATTCTTGAATATTTATTGGTATAGTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGaa                                                                                   >  2:3544590/1‑93 (MQ=255)

      tattatTTACACTTCATTCTTGAATATTTATTGGTATAGTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGaa                                                                                   >  2:5891446/1‑93 (MQ=255)

        ttattTACACTTCATTCTTGAATATTTATTGGTATAGTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAAt                                                                                 >  1:1840337/1‑93 (MQ=255)

         tattTACACTTCATTCTTGAATATTTATTGGTATAGTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAAtt                                                                                <  2:9950999/93‑1 (MQ=255)

          attTACACTTCATTCTTGAATATTTATTGGTATAGTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTg                                                                               >  2:7954489/1‑93 (MQ=255)

           tttACACTTCATTCTTGAATATTTATTGGTATAGTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGt                                                                              >  1:3059363/1‑93 (MQ=255)

           tttACACTTCATTCTTGAATATTTATTGGTATAGTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGt                                                                              >  2:3819257/1‑93 (MQ=255)

           tttACACTTCATTCTTGAATATTTATTGGTATAGTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGt                                                                              <  2:9679579/93‑1 (MQ=255)

           tttACACTTCATTCTTGAATATTTATTGGTATAGTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGt                                                                              >  1:8527726/1‑93 (MQ=255)

            ttccacTTCATTCTTGAATATTTATTGGCATAGTAAGAGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCACTCGCAAATGTa                                                                             >  1:4408019/4‑93 (MQ=255)

            ttACACTTCATTCTTGAATATTTATTGGTATAGTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTa                                                                             >  2:5612949/1‑93 (MQ=255)

            ttACACTTCATTCTTGAATATTTATTGGTATAGTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTa                                                                             <  1:9367413/93‑1 (MQ=255)

            ttACACTTCATTCTTGAATATTTATTGGTATAGTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTa                                                                             <  1:7648583/93‑1 (MQ=255)

             tACACTTCATTCTTGAATATTTATTGGTATAGTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTAc                                                                            <  2:976604/93‑1 (MQ=255)

              acacTTCATTCTTGAATATTTATTGGTATAGTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACt                                                                           >  2:6326855/1‑93 (MQ=255)

              acacTTCATTCTTGAATATTTATTGGTATAGTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACt                                                                           <  2:8861113/93‑1 (MQ=255)

               cacTTCATTCTTGAATATTTATTGGTATAGTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTa                                                                          >  1:5661219/1‑93 (MQ=255)

               cacTTCATTCTTGAATATTTATTGGTATAGTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTa                                                                          <  1:6004818/93‑1 (MQ=255)

                acTTCATTCTTGAATATTTATTGGTATAGTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAg                                                                         >  2:2468552/1‑93 (MQ=255)

                 cTTCATTCTTGAATATTTATTGGTATAGTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGt                                                                        >  1:1315358/1‑93 (MQ=255)

                  ttCATTCTTGAATATTTATTGGTATAGTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGtt                                                                       <  1:1631693/93‑1 (MQ=255)

                  ttCATTCTTGAATATTTATTGGTATAGTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGtt                                                                       >  2:9285593/1‑93 (MQ=255)

                  ttCATTCTTGAATATTTATTGGTATAGTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGtt                                                                       >  2:2054808/1‑93 (MQ=255)

                   tCATTCTTGAATATTTATTGGTATAGTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGttt                                                                      <  1:10033456/93‑1 (MQ=255)

                      ttCTTGAATATTTATTGGTATAGTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGAt                                                                   >  1:7072255/1‑93 (MQ=255)

                      ttCTTGAATATTTATTGGTATAGTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGAt                                                                   >  2:1324360/1‑93 (MQ=255)

                       tCTTGAATATTTATTGGTATAGTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATg                                                                  >  2:789235/1‑93 (MQ=255)

                        cTTGAATATTTATTGGTATAGTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATgg                                                                 <  2:4284197/93‑1 (MQ=255)

                        cTTGAATATTTATTGGTATAGTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATgg                                                                 >  1:8399864/1‑93 (MQ=255)

                         ttGAATATTTATTGGTATAGTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGt                                                                <  2:7479046/93‑1 (MQ=255)

                         ttGAATATTTATTGGTATAGTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGt                                                                >  1:9639964/1‑93 (MQ=255)

                          tGAATATTTATTGGTATAGTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTa                                                               <  2:1568739/93‑1 (MQ=255)

                          tGAATATTTATTGGTATAGTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTa                                                               >  1:4073493/1‑93 (MQ=255)

                           gAATATTTATTGGTATAGTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTAt                                                              >  2:4775213/1‑93 (MQ=255)

                             atatTTATTGGTATAGTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGa                                                            <  1:977086/93‑1 (MQ=255)

                             atatTTATTGGTATAGTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGa                                                            <  1:499780/93‑1 (MQ=255)

                                tttattGGTATAGTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGGATGATCg                                                         >  1:2127822/1‑93 (MQ=255)

                                    ttGGTATAGTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTAt                                                     <  1:7780129/93‑1 (MQ=255)

                                    ttGGTATAGTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTAt                                                     <  2:2699702/93‑1 (MQ=255)

                                    ttGGTATAGTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTAt                                                     >  2:3149221/1‑93 (MQ=255)

                                    ttGGTATAGTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTAt                                                     >  2:1786861/1‑93 (MQ=255)

                                        tataGTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATtctc                                                 >  2:8084360/1‑93 (MQ=255)

                                         ataGTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCa                                                <  1:5087831/93‑1 (MQ=255)

                                          taGTAAGGGGTGTATTGAGATTTTCACTTTAAGTGTAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCAt                                               <  1:9112812/93‑1 (MQ=255)

                                          taGTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCAt                                               >  2:8647176/1‑93 (MQ=255)

                                            gTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCATGa                                             >  1:2030664/1‑93 (MQ=255)

                                            gTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCATGa                                             <  1:2608100/93‑1 (MQ=255)

                                            gTAAGGGGTGCATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCATGa                                             >  2:1666562/1‑93 (MQ=255)

                                             tAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCATGac                                            >  2:3691357/1‑93 (MQ=255)

                                               aGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCATGacac                                          >  2:5280559/1‑93 (MQ=255)

                                                    tgtATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCATGACACCGGCt                                     <  1:7950771/93‑1 (MQ=255)

                                                    tgtATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCATGACACCGGCt                                     >  1:7271020/1‑93 (MQ=255)

                                                     gtATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCATGACACCGGCtt                                    >  2:2826667/1‑93 (MQ=255)

                                                     gtATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCATGACACCGGCtt                                    >  2:650797/1‑93 (MQ=255)

                                                      tATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCATGACACCGGCttt                                   <  2:5070766/93‑1 (MQ=255)

                                                      tATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCATGACACCGGCttt                                   >  1:4785829/1‑93 (MQ=255)

                                                      tATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCATGACACCGGCttt                                   >  1:5839206/1‑93 (MQ=255)

                                                       aTTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCATGACACCGGCTTTc                                  >  1:3876591/1‑93 (MQ=255)

                                                       aTTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCATGACACCGGCTTTc                                  >  2:1262058/1‑93 (MQ=255)

                                                       aTTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCATGACACCGGCTTTc                                  <  2:1192266/93‑1 (MQ=255)

                                                         tGAGATTTTCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCATGACACCGGCTTTcgc                                <  1:2240973/93‑1 (MQ=255)

                                                             gttttCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCATGACACCGGCTTTCGCCGCa                            <  1:6890661/92‑1 (MQ=255)

                                                              ttttCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCATGACACCGGCTTTCGCCGCAt                           >  2:6058210/1‑93 (MQ=255)

                                                               tttCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCATGACACCGGCTTTCGCCGCAtt                          <  2:3255024/93‑1 (MQ=255)

                                                                ttCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCATGACACCGGCTTTCGCCGCATTg                         <  1:4530914/93‑1 (MQ=255)

                                                                ttCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCATGACACCGGCTTTCGCCGCATTg                         >  1:3592322/1‑93 (MQ=255)

                                                                 tCACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCATGACACCGGCTTTCGCCGCATTGc                        >  2:6730606/1‑93 (MQ=255)

                                                                  cACTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCATGACACCGGCTTTCGCCGCATTGCg                       >  2:957123/1‑93 (MQ=255)

                                                                    cTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCATGACACCGGCTTTCGCCGCATTGCGAc                     <  2:1032504/93‑1 (MQ=255)

                                                                    cTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCATGACACCGGCTTTCGCCGCATTGCGAc                     >  1:6478194/1‑93 (MQ=255)

                                                                    cTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCATGACACCGGCTTTCGCCGCATTGCGAc                     >  1:816022/1‑93 (MQ=255)

                                                                    cTTTAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCATGACACCGGCTTTCGCCGCATTGCGAc                     <  2:4467152/93‑1 (MQ=255)

                                                                       tAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCATGACACCGGCTTTCGCCGCATTGCGACCTa                  >  2:726164/1‑93 (MQ=255)

                                                                       tAAGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCATGACACCGGCTTTCGCCGCATTGCGACCTa                  <  1:9881269/93‑1 (MQ=255)

                                                                         aGTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCATGACACCGGCTTTCGCCGCATTGCGACCTAtt                <  2:2769187/93‑1 (MQ=255)

                                                                          gTGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCATGACACCGGCTTTCGCCGCATTGCGACCTATTg               <  1:8034485/93‑1 (MQ=255)

                                                                           tGGAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCATGACACCGGCTTTCGCCGCATTGCGACCTATTgg              <  2:5358843/93‑1 (MQ=255)

                                                                            ggAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCATGACACCGGCTTTCGCCGCATTGCGACCTATTggg             <  1:7401301/93‑1 (MQ=255)

                                                                            ggAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCATGACACCGGCTTTCGCCGCATTGCGACCTATTggg             >  2:4185961/1‑93 (MQ=255)

                                                                            ggAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCATGACACCGGCTTTCGCCGCATTGCGACCTATTggg             >  2:189402/1‑93 (MQ=255)

                                                                             gAATTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCATGACACCGGCTTTCGCCGCATTGCGACCTATTgggg            >  1:6236840/1‑93 (MQ=255)

                                                                               aTTTTTTCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCATGACACCGGCTTTCGCCGCATTGCGACCTATTGGGGaa          >  2:9072920/1‑93 (MQ=255)

                                                                                 tttttCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCATGACACCGGCTTTCGCCGCATTGCGACCTATTGGGGaaaa        <  1:2372013/93‑1 (MQ=255)

                                                                                  ttttCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCATGACACCGGCTTTCGCCGCATTGCGACCTATTGGGGAAAAc       <  2:2225336/93‑1 (MQ=255)

                                                                                    ttCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCATGACACCTGCTTTCGCCGCATTGCGACCTATTGGGGAAAAccc     <  1:8719102/93‑1 (MQ=255)

                                                                                    ttCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCATGACACCGGCTTTCGCCGCATTGCGACCTATTGGGGAAAAccc     >  2:8345951/1‑93 (MQ=255)

                                                                                     tCTTTGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCATGACACCGGCTTTCGCCGCATTGCGACCTATTGGGGAAAACCCa    >  2:885346/1‑93 (MQ=255)

                                                                                       tttGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCATGACACCGGCTTTCGCCGCATTGCGACCTATTGGGGAAAACCCACg  >  2:1520424/1‑93 (MQ=255)

                                                                                       tttGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCATGACACCGGCTTTCGCCGCATTGCGACCTATTGGGGAAAACCCACg  >  1:6190468/1‑93 (MQ=255)

                                                                                       tttGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCATGACACCGGCTTTCGCCGCATTGCGACCTATTGGGGAAAACCCACg  >  2:9489227/1‑93 (MQ=255)

                                                                                       tttGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCATGACACCGGCTTTCGCCGCATTGCGACCTATTGGGGAAAACCCACg  >  1:666535/1‑93 (MQ=255)

                                                                                       tttGCAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCATGACACCGGCTTTCGCCGCATTGCGACCTATTGGGGAAAACCCACg  >  1:5257623/1‑93 (MQ=255)

GTAATTTATTATTTACACTTCATTCTTGAATATTTATTGGTATAGTAAGGGGTGTATTGAGATTTTCACTTTAAGTGGAATTTTTTCTTTACAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCATGACACCGGCTTTCGCCGCATTGCGACCTATTGGGGAAAACCCACG  >  NC_000913/405449‑405628

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`