Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,484,151 T→C V132A (GTG→GCG)  crp → cyclic AMP receptor protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,484,1510TC99.4% 1505.2 / ‑2.9 467V132A (GTG→GCG) crpcyclic AMP receptor protein
Reads supporting (aligned to +/- strand):  ref base T (2/1);  new base C (202/262);  total (204/263)
Fisher's exact test for biased strand distribution p-value = 5.83e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.11e-01

Only 100 of 476 total aligned reads displayed.

AATTTCGCCAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCACCCGG  >  NC_000913/3484061‑3484240
                                                                                          |                                                                                         
aaTTTCGCCAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCgg                                                                                         >  1:2874318/1‑93 (MQ=255)
 aTTTCGCCAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCggg                                                                                        <  1:7835140/93‑1 (MQ=255)
 aTTTCGCCAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCggg                                                                                        >  2:3206309/1‑93 (MQ=255)
  tttCGCGAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGc                                                                                       <  1:8935876/93‑1 (MQ=255)
  tttCGCCAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGc                                                                                       <  1:1413467/93‑1 (MQ=255)
  tttCGCCAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGc                                                                                       >  1:8295281/1‑93 (MQ=255)
     cGCCAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAAc                                                                                    <  1:1072088/93‑1 (MQ=255)
     cGCCAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAAc                                                                                    <  2:277214/93‑1 (MQ=255)
      gCCAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAAcc                                                                                   >  1:3839318/1‑93 (MQ=255)
        cAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTg                                                                                 <  1:6235369/93‑1 (MQ=255)
        cAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTg                                                                                 <  2:6796296/93‑1 (MQ=255)
        cAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCACGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTg                                                                                 <  1:428210/93‑1 (MQ=255)
         aaTTGATTCAGGTAACCCCGGTCATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTgg                                                                                <  2:5153561/93‑1 (MQ=255)
         aaTTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTgg                                                                                >  1:9632215/1‑93 (MQ=255)
           ttGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCg                                                                              <  1:4753656/93‑1 (MQ=255)
             gATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGtt                                                                            >  2:696463/1‑93 (MQ=255)
              aTTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTc                                                                           <  1:3657186/93‑1 (MQ=255)
              aTTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTc                                                                           <  2:9715501/93‑1 (MQ=255)
               ttCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTcc                                                                          >  2:4895791/1‑93 (MQ=255)
               ttCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTcc                                                                          >  1:9107722/1‑93 (MQ=255)
               ttCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTcc                                                                          >  1:3263208/1‑93 (MQ=255)
                 cAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTc                                                                        <  1:714512/93‑1 (MQ=255)
                  aGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCg                                                                       <  1:2148569/93‑1 (MQ=255)
                   ggTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGa                                                                      <  2:1474235/93‑1 (MQ=255)
                   ggTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGa                                                                      >  1:1212861/1‑93 (MQ=255)
                   ggTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGa                                                                      <  1:3127871/93‑1 (MQ=255)
                   ggTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGa                                                                      >  2:9379280/1‑93 (MQ=255)
                   ggTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGa                                                                      >  2:8480576/1‑93 (MQ=255)
                   ggTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGa                                                                      <  2:8296135/93‑1 (MQ=255)
                   agTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGa                                                                      <  2:9326394/92‑1 (MQ=255)
                    gTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGAc                                                                     <  1:6549106/93‑1 (MQ=255)
                      aaaCCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGt                                                                   >  2:2237550/1‑93 (MQ=255)
                       aaCCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTg                                                                  <  1:7399625/93‑1 (MQ=255)
                         cccGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGAc                                                                <  2:5769827/93‑1 (MQ=255)
                          ccGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACg                                                               >  2:4564745/1‑93 (MQ=255)
                           cGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCgacgggacgg                                                              <  2:6473625/93‑1 (MQ=255)
                             gACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGc                                                            <  2:8137238/93‑1 (MQ=255)
                             gACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGc                                                            <  1:9815739/93‑1 (MQ=255)
                             gACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGc                                                            >  1:3585979/1‑93 (MQ=255)
                             gACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGc                                                            >  1:5656395/1‑93 (MQ=255)
                             gACAATATGATGAGTATATATGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGAAGTGACgaga                                                            <  2:8969932/93‑4 (MQ=255)
                              aCATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGcc                                                           >  1:7300739/1‑93 (MQ=255)
                               cgttCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCg                                                          >  1:1719174/3‑93 (MQ=255)
                                aTTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGc                                                         <  2:7168327/93‑1 (MQ=255)
                                 ttCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCa                                                        <  2:4817943/93‑1 (MQ=255)
                                 ttCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCa                                                        <  1:5400482/93‑1 (MQ=255)
                                 ttCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCa                                                        >  2:4160649/1‑93 (MQ=255)
                                  tCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCAt                                                       <  1:8780551/93‑1 (MQ=255)
                                  tCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCAt                                                       <  2:7565605/93‑1 (MQ=255)
                                   cTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCACGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCAtt                                                      >  2:1612094/1‑93 (MQ=255)
                                    tGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTg                                                     >  2:6442756/1‑93 (MQ=255)
                                    tGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTg                                                     <  2:8763725/93‑1 (MQ=255)
                                     gATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGc                                                    >  2:7435958/1‑93 (MQ=255)
                                     gATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGc                                                    <  2:5908853/93‑1 (MQ=255)
                                      aTGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGca                                                   <  2:3830706/93‑1 (MQ=255)
                                       tGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGcac                                                  <  1:4910395/93‑1 (MQ=255)
                                       tGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGcac                                                  <  2:2526654/93‑1 (MQ=255)
                                        gCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGcaca                                                 <  1:2055827/93‑1 (MQ=255)
                                           tttGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGAc                                              >  1:8484416/1‑93 (MQ=255)
                                           tttGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGAc                                              >  1:5571774/1‑93 (MQ=255)
                                           tttGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGAc                                              <  1:6439244/93‑1 (MQ=255)
                                            ttGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGAct                                             >  2:3634035/1‑93 (MQ=255)
                                            ttGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGAct                                             >  1:5902272/1‑93 (MQ=255)
                                            ttGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGAct                                             <  1:671477/93‑1 (MQ=255)
                                               tCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTctg                                          <  1:4204371/93‑1 (MQ=255)
                                                 tGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTctgct                                        >  2:9013873/1‑93 (MQ=255)
                                                 tGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTctgct                                        <  2:3023847/93‑1 (MQ=255)
                                                 tGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTctgct                                        >  2:1255436/1‑93 (MQ=255)
                                                   cacaGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGa                                      >  1:545714/1‑93 (MQ=255)
                                                     caGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAAt                                    <  1:7707681/93‑1 (MQ=255)
                                                     caGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAAt                                    <  2:7926570/93‑1 (MQ=255)
                                                      aGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATc                                   <  1:9273002/93‑1 (MQ=255)
                                                        aTGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTg                                 <  1:444132/93‑1 (MQ=255)
                                                            cgcgTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCaa                             <  1:4604401/93‑1 (MQ=255)
                                                             gcgTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCaaa                            >  1:6931823/1‑93 (MQ=255)
                                                              cgtcgtCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCaaaa                           >  2:5542933/1‑93 (MQ=255)
                                                               gtcgtcTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGAAGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAaac                          <  1:8634056/93‑1 (MQ=255)
                                                                  gtcTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCACaacaac                       >  2:1917265/1‑93 (MQ=255)
                                                                  gtcTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAaacaac                       <  1:2011867/93‑1 (MQ=255)
                                                                  gtcTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAaacaac                       <  1:10038616/93‑1 (MQ=255)
                                                                   tcTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAAcc                      >  1:5004331/1‑93 (MQ=255)
                                                                     tGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAg                    >  2:2866052/1‑93 (MQ=255)
                                                                       cAAGTCACTTCAGAGAAAGCGGGCAACCTCGCGTTCCTCGACGTGAGGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGAc                  <  1:3071894/93‑1 (MQ=255)
                                                                         aGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGc                >  2:3915207/1‑93 (MQ=255)
                                                                         aGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGc                >  1:8195374/1‑93 (MQ=255)
                                                                          gtaaCTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCt               <  1:2677415/90‑1 (MQ=255)
                                                                          gTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCt               <  2:953706/93‑1 (MQ=255)
                                                                          gTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCt               <  1:8032820/93‑1 (MQ=255)
                                                                           tCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTa              >  1:3956483/1‑93 (MQ=255)
                                                                           tCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTa              <  2:5726099/93‑1 (MQ=255)
                                                                           tCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTa              >  1:2290374/1‑93 (MQ=255)
                                                                            cACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTAt             <  1:1318605/93‑1 (MQ=255)
                                                                             aCTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATg            >  2:6144510/1‑93 (MQ=255)
                                                                                tCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACt         >  1:7589796/1‑93 (MQ=255)
                                                                                  agagAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCa       <  2:9870554/93‑1 (MQ=255)
                                                                                   gagaAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCAc      >  2:5370071/1‑93 (MQ=255)
                                                                                    agaAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCAcc     <  2:6569317/93‑1 (MQ=255)
                                                                                     gaAAGCGGGCAACCTGGCGCTCCGCGACGTGACGGGTCGCATTTCACAGCCTCTGCTGAATCTGGCAAAACAACCAGACGCTATGGCTCAccc    <  2:1120216/93‑1 (MQ=255)
                                                                                       aaGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCACCCgg  >  2:8652315/1‑93 (MQ=255)
                                                                                       aaGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCACCCgg  <  1:2498743/93‑1 (MQ=255)
                                                                                          |                                                                                         
AATTTCGCCAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCACCCGG  >  NC_000913/3484061‑3484240

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: