BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,582,668	G→A	L93L (TTG→TTA)	yrhB →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,582,668	0	G	A	97.9%	1166.0 / NA	335	L93L (TTG→TTA)	yrhB	hypothetical protein
Reads supporting (aligned to +/- strand): ref base G (0/0); major base A (220/108); minor base C (0/7); total (220/115)
Fisher's exact test for biased strand distribution p-value = 4.97e-04
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 368 total aligned reads displayed.

AGACAGTGGTGAAATTCATTCTCTGGGAACGGCAAAACCGCTGGAAGAATATCTACAGGATTACGAAATAAAAAAGGCTACCTTCGGCTTGCCCTGACAAAATAGCCCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTACCCCGCCGTTAAATCATCCACCGAGCGCGGGTCGGATGCG  >  NC_000913/3582578‑3582757

aGACAGTGGTGAAATTCATTCTCTGGGAACGGCAAAACCGCTGGAAGAATATCTACAGGATTACGAAATAAAAAAGGCTACCTTCGGCTTAcc                                                                                         <  2:3276556/93‑1 (MQ=255)

 gACAGTGGTGAAATTCATTCTCTGGGAACGGCAAAACCGCTGGAAGAATATCTACAGGATTACGAAATAAAAAAGGCTACCTTCGGCTTAccc                                                                                        <  2:2635156/93‑1 (MQ=255)

     gtggtgAAATTCATTCTCTGGGAACGGCAAAACCGCTGGAAGAATATCTACAGGATTACGAAATAAAAAAGGCTACCTTCGGCTTACCCTGAc                                                                                    <  2:840568/93‑1 (MQ=255)

     gtggtgAAATTCATTCTCTGGGAACGGCAAAACCGCTGGAAGAATATCTACAGGATTACGAAATAAAAAAGGCTACCTTCGGCTTACCCTGAc                                                                                    >  2:2794187/1‑93 (MQ=255)

      tggtgAAATTCATTCTCTGGGAACGGCAAAACCGCTGGAAGAATATCTACAGGATTACGAAATAAAAAAGGCTACCTTCGGCTTACCCTGACa                                                                                   <  1:9607550/93‑1 (MQ=255)

       ggtgAAATTCATTCTCTGGGAACGGCAAAACCGCTGGAAGAATATCTACAGGATTACGAAATAAAAAAGGCTACCTTCGGCTTACCCTGCCaa                                                                                  >  1:1206917/1‑93 (MQ=255)

        gtgAAATTCATTCTCTGGGAACGGCAAAACCGCTGGAAGAATATCTACAGGATTACGAAATAAAAAAGGCTACCTTCGGCTTACCCTGACaaa                                                                                 >  2:5553134/1‑93 (MQ=255)

         tgAAATTCATTCTCTGGGAACGGCAAAACCGCTGGAAGAATATCTACAGGATTACGAAATAAAAAAGGCTACCTTCGGCTTACCCTGACaaaa                                                                                >  1:8621521/1‑93 (MQ=255)

         tgAAATTCATTCTCTGGGAACGGCAAAACCGCTGGAAGAATATCTACAGGATTACGAAATAAAAAAGGCTACCTTCGGCTTACCCTGACaaaa                                                                                <  2:9566591/93‑1 (MQ=255)

             attcattcTCTGGGAACGGCAAAACCGCTGGAAGAATATCTACAGGATTACGAAATAAAAAAGGCTACCTTCGGCTTACCCTGACAAAATAGc                                                                            >  2:7740777/1‑93 (MQ=255)

              ttcattcTCTGGGAACGGCAAAACCGCTGGAAGAATATCTACAGGATTACGAAATAGAAAAGGCTACCTTCGGCTTACCCTGACAAAATAGcc                                                                           >  1:812172/1‑93 (MQ=255)

              ttcattcTCTGGGAACGGCAAAACCGCTGGAAGAATATCTACAGGATTACGAAATAAAAAAGGCTACCTTCGGCTTACCCTGACAAAATAGcc                                                                           >  1:1810500/1‑93 (MQ=255)

               tcattcTCTGGGAACGGCAAAACCGCTGGAAGAATATCTACAGGATTACGAAATAAAAAAGGCTACCTTCGGCTTACCCTGACAAAATAGccc                                                                          >  2:4030353/1‑93 (MQ=255)

                cattcTCTGGGAACGGCAAAACCGCTGGAAGAATATCTACAGGATTACGAAATAAAAAAGGCTACCTTCGGCTTACCCTGACAAAATAGCCct                                                                         >  2:4519806/1‑93 (MQ=255)

                  ttcTCTGGGAACGGCAAAACCGCTGGAAGAATATCTACAGGATTACGAAATAAAAAAGGCTACCTTCGGCTTACCCTGACAAAATAGCCctct                                                                       >  1:10019501/1‑93 (MQ=255)

                  ttcTCTGGGAACGGCAAAACCGCTGGAAGAATATCTACAGGATTACGAAATAAAAAAGGCTACCTTCGGCTTACCCTGACAAAATAGCCctct                                                                       <  2:53396/93‑1 (MQ=255)

                  ttcTCTGGGAACGGCAAAACCGCTGGAAGAATATCTACAGGATTACGAAATAAAAAAGGCTACCTTCGGCTTACCCTGACAAAATAGCCctct                                                                       >  1:9126858/1‑93 (MQ=255)

                  ttcTCTGGGAACGGCAAAACCGCTGGAAGAATATCTACAGGATTACGAAATAAAAAAGGCTACCTTCGGCTTACCCTGACAAAATAGCCctct                                                                       >  2:314058/1‑93 (MQ=255)

                  ttcTCTGGGAACGGCAAAACCGCTGGAAGAATATCTACAGGATTACAAAATAAAAAAGGCTCCCTTCGGCTTACCCTGGCAAAATAGCCctct                                                                       <  2:6522633/93‑1 (MQ=255)

                    ctctGGGAACGGCAAAACCGCTGGAAGAATATCTACAGGATTACGAAATAAAAAAGGCTACCTTCGGCTTACCCTGACAAAATAGCCCTCTTc                                                                     <  1:4114165/93‑1 (MQ=255)

                     tctGGGAACGGCAAAACCGCTGGAAGAATATCTACAGGATTACGAAATAAAAAAGGCTACCTTCGGCTTACCCTGACAAAATAGCCCTCTTcc                                                                    <  2:661558/93‑1 (MQ=255)

                      ctGGGAACGGAAAAACCGCTGGAAGAACATCTACAGGATTACGAAATAAAAAAGGATACCTTCGGCTTACCCTGACAAAATAGCCCTCTTccc                                                                   >  2:2110157/1‑93 (MQ=255)

                       tGGGAACGGCAAAACCGCTGGAAGAATATCTACAGGATTACGAAATAAAAAAGGCTACCTTCGGCTTACCCTGACAAAATAGCCCTCTTCCCa                                                                  <  2:3634898/93‑1 (MQ=255)

                       tGGGAACGGCAAAACCGCTGGAAGAATATCTACAGGATTACGAAATAAAAAAGGCTACCTTCGGCTTACCCTGACAAAATAGCCCTCTTCCCa                                                                  >  2:1986322/1‑93 (MQ=255)

                         ggAACGGCAAAACCGCTGGAAGAATATCTACAGGATTACGAAATAAAAAAGGCTACCTTCGGCTTACCCTGACAAAATAGCCCTCTTCCCACg                                                                >  1:7507821/1‑93 (MQ=255)

                             cGGCAAAACCGCTGGAAGAATATCTACAGGATTACGAAATAAAAAAGGCTACCTTCGGCTTACCCTGACAAAATAGCCCTCTTCCCACGAaga                                                            >  1:4508390/1‑93 (MQ=255)

                             cGGCAAAACCGCTGGAAGAATATCTACAGGATTACGAAATAAAAAAGGCTACCTTCGGCTTACCCTGACAAAATAGCCCTCTTCCCACGAaga                                                            <  2:7167986/93‑1 (MQ=255)

                               gCAAAACCGCTGGAAGAATATCTACAGGATTACGAAATAAAAAAGGCTACCTTCGGCTTACCCTGACAAAATAGCCCTCTTCCCACGAAGAgg                                                          >  2:3544558/1‑93 (MQ=255)

                                 aaaaCCGCTGGAAGAATATCTACAGGATTACGAAATAAAAAAGGCTACCTTCGGCTTACCCTGACAAAATAGCCCTCTTCCCACGAAGAGGGc                                                        >  1:289325/1‑93 (MQ=255)

                                  aaaCCGCTGGAAGAATATCTACAGGATTACGAAATAAAAAAGGCTACCTTCGGCTTACCCTGACAAAATAGCCCTCTTCCCACGAAGAGGGcc                                                       >  2:2737468/1‑93 (MQ=255)

                                  aaaCCGCTGGAAGAATATCTACAGGATTACGAAATAAAAAAGGCTACCTTCGGCTTACCCTGACAAAATAGCCCTCTTCCCACGAAGAGGGcc                                                       <  1:6078328/93‑1 (MQ=255)

                                  aaaCCGCTGGAAGAATATCTACAGGATTACGAAATAAAAAAGGCTACCTTCGGCTTACCCTGACAAAATAGCCCTCTTCCCACGAAGAGGGcc                                                       <  2:6380645/93‑1 (MQ=255)

                                  aaaCCGCTGGAAGAATATCTACAGGATTACGAAATAAAAAAGGCTACCTTCGGCTTACCCTGACAAAATAGCCCTCTTCCCACGAAGAGGGcc                                                       >  1:1431397/1‑93 (MQ=255)

                                  aaaCCGCTGGAAGAATATCTACAGGATTACGAAATAAAAAAGGCTACCTTCGGCTTACCCTGACAAAATAGCCCTCTTCCCACGAAGAGGGcc                                                       >  2:9936715/1‑93 (MQ=255)

                                    aCCGCTGGAAGAATATCTACAGGATTACGAAATAAAAAAGGCTACCTTCGGCTTACCCTGACAAAATAGCCCTCTTCCCACGAAGAGGGCCGc                                                     >  2:1211644/1‑93 (MQ=255)

                                    aCCGCTGGAAGAATATCTACAGGATTACGAAATAAAAAAGGCTACCTTCGGCTTACCCTGACAAAATAGCCCTCTTCCCACGAAGAGGGCCGc                                                     >  1:5563466/1‑93 (MQ=255)

                                       gCTGGAAGAATATCTACAGGATTACGAAATAAAAAAGGCTACCTTCGGCTTACCCTGACAAAATAGCCCTCTTCCCACGAAGAGGGCCGCTaa                                                  >  1:7153642/1‑93 (MQ=255)

                                        cTGGAAGAATATCTACAGGATTACGAAATAAAAAAGGCTACCTTCGGCTTACCCTGACAAAATAGCCCTCTTCCCACGAAGAGGGCCGCTAAc                                                 <  1:6865407/93‑1 (MQ=255)

                                          ggAAGAATATCTACAGGATTACGAAATAAAAAAGGCTACCTTCGGCTTACCCTGACAAAATAGCCCTCTTCCCACGAAGAGGGCCGCTAACCt                                               >  2:9671969/1‑93 (MQ=255)

                                          ggAAGAATATCTACAGGATTACGAAATAAAAAAGGCTACCTTCGGCTTACCCTGACAAAATAGCCCTCTTCCCACGAAGAGGGCCGCTAACCt                                               >  2:7023667/1‑93 (MQ=255)

                                          ggAAGAATATCTACAGGATTACGAAATAAAAAAGGCTACCTTCGGCTTACCCTGACAAAATAGCCCTCTTCCCACGAAGAGGGCCGCTAACCt                                               >  1:8967407/1‑93 (MQ=255)

                                           gaagaaTATCTACAGGATTACGAAATAAAAAAGGCTACCTTCGGCTTACCCTGACAAAATAGCCCTCTTCCCACGAAGAGGGCTGCTAACCtt                                              <  2:5768673/93‑1 (MQ=255)

                                           gaagaaTATCTACAGGATTACGAAATAAAAAAGGCTACCTTCGGCTTACCCTGACAAAATAGCCCTCTTCCCACGAAGAGGGCCGCTAACCtt                                              >  1:6615988/1‑93 (MQ=255)

                                            aagaaTATCTACAGGATTACGAAATAAAAAAGGCTACCTTCGGCTTACCCTGACAAAATAGCCCTCTTCCCACGAAGAGGGCCGCTAACCTTa                                             <  1:8425492/93‑1 (MQ=255)

                                            aagaaTATCTACAGGATTACGAAATAAAAAAGGCTACCTTCGGCTTACCCTGACAAAATAGCCCTCTTCCCACGAAGAGGGCCGCTAACCTTa                                             <  2:8503119/93‑1 (MQ=255)

                                            aagaaTATCTACAGGATTACGAAATAAAAAAGGCTACCTTCGGCTTACCCTGACAAAATAGCCCTCTTCCCACGAAGAGGGCCACTAACCTTa                                             <  2:6734689/93‑1 (MQ=255)

                                             agaaTATCTACAGGATTACGAAATAAAAAAGGCTCCCTTCGGCTTACCCTGACAAAATAGCCCTCTTCCCACGAAGAGGGCCGCTAACCTTAg                                            <  1:3987383/93‑1 (MQ=255)

                                             agaaTATCTACAGGATTACGAAATAAAAAAGGCTACCTTCGGCTTACCCTGACAAAATAGCCCTCTTCCCACGAAGAGGGCCGCTAACCTTAg                                            <  2:8318040/93‑1 (MQ=255)

                                             agaaTATCTACAGGATTACGAAATAAAAAAGGCTACCTTCGGCTTACCCTGACAAAATAGCCCTCTTCCCACGAAGAGGGCCGCTAACCTTAg                                            <  2:6173207/93‑1 (MQ=255)

                                             agaaTATCTACAGGATTACGAAATAAAAAAGGCTACCTTCGGCTTACCCTGACAAAATAGCCCTCTTCCCACGAAGAGGGCCGCTAACCTTAg                                            <  1:4791788/93‑1 (MQ=255)

                                              gaaTATCTACAGGATTACGAAATAAAAAAGGCTACCTTCGGCTTACCCTGACAAAATAGCCCTCTTCCCACGAAGAGGGCCGCTAACCTTAGt                                           <  1:8761197/93‑1 (MQ=255)

                                              gaaTATCTACAGGATTACGAAATAAAAAAGGCTACCTTCGGCTTACCCTGACAAAATAGCCCTCTTCCCACGAAGAGGGCCGCTAACCTTAGt                                           >  2:7578023/1‑93 (MQ=255)

                                              gaaTATCTACAGGATTACGAAATAAAAAAGGCTACCTTCGGCTTACCCTGACAAAATAGCCCTCTTCCCACGAAGAGGGCCGCTAACCTTAGt                                           >  1:2312879/1‑93 (MQ=255)

                                              gaaTATCTACAGGATTACGAAATAAAAAAGGCTACCTTCGGCTTACCCTGACAAAATAGCCCTCTTCCCACGAAGAGGGCCGCTAACCTTAGt                                           >  2:344606/1‑93 (MQ=255)

                                               aaTATCTACAGGATTACGAAATAAAAAAGGCTACCTTCGGCTTACCCTGACAAAATAGCCCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTa                                          <  1:9728498/93‑1 (MQ=255)

                                               aaTATCTACAGGATTACGAAATAAAAAAGGCTACCTTCGGCTTACCCTGACAAAATACCCCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTa                                          <  1:192956/93‑1 (MQ=255)

                                                atatCTACAGGATTACGAAATAAAAAAGGCTACCTTCGGCTTACCCTGACAAAATAGCCCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTAc                                         <  1:1523320/93‑1 (MQ=255)

                                                 tatCTACAGGATTACGAAATAAAAAAGGCTACCTTCGGCTTACCCTGACAAAATAGCCCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTAcc                                        >  1:7833405/1‑93 (MQ=255)

                                                 tatCTACAGGATTACGAAATAAAAAAGGCTACCTTCGGCTTACCCTGACAAAATAGCCCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTAcc                                        <  1:6117266/93‑1 (MQ=255)

                                                  atCTACAGGATTACGAAATAAAAAAGGCTACCTTCGGCTTACCCTGACAAAATAGCCCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTAccc                                       <  2:4791591/93‑1 (MQ=255)

                                                     tACAGGATTACGAAATAAAAAAGGCTACCTTCGGCTTACCCTGACAAAATAGCCCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTACCccgc                                    >  2:9150000/1‑93 (MQ=255)

                                                     tACAGGATTACGAAATAAAAAAGGCTACCTTCGGCTTACCCTGACAAAATAGCCCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTACCccgc                                    >  2:3879669/1‑93 (MQ=255)

                                                      aCAGGATTAGGAAATAAAAAAGGCTACCTTCGGCTTACCCTGACAAAATAGCCCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTACCccgcc                                   <  2:5430643/93‑1 (MQ=255)

                                                       cAGGATTACGAAATAAAAAAGGCTACCTTCGGCTTACCCTGACAAAATAGCCCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTACCccgccg                                  >  1:1071813/1‑93 (MQ=255)

                                                       cAGGATTACGAAATAAAAAAGGCTACCTTCGGCTTACCCTGACAAAATAGCCCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTACCccgccg                                  >  1:5744840/1‑93 (MQ=255)

                                                        aGGATTACGAAATAAAAAAGGCTACCTTCGGCTTACCCTGACAAAATAGCCCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTACCCCGCCGt                                 >  1:3042840/1‑93 (MQ=255)

                                                        aGGATTACGAAAAAAAAAAGGCTACCTTCGGCTTACCCTGACAAAATAGCCCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTCCCCCGCCGt                                 <  1:3550121/93‑1 (MQ=255)

                                                         ggATTACGAAATAAAAAAGGCTACCTTCGGCTTACCCTGACAAAATAGCCCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTACCCCGCCGtt                                >  2:2256644/1‑93 (MQ=255)

                                                         ggATTACGAAATAAAAAAGGCTACCTTCGGCTTACCCTGACAAAATAGCCCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTACCCCGCCGtt                                >  1:8338412/1‑93 (MQ=255)

                                                         ggATTACGAAATAAAAAAGGCTACCTTCGGCTTACCCTGACAAAATAGCCCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTACCCCGCCGtt                                >  2:1879128/1‑93 (MQ=255)

                                                            ttACGAAAAAAAAAAGGCTCCCTTCGGCTTACCCTGACAAAATAGCCCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTACCCCGCCGTTaaa                             <  2:7858356/93‑1 (MQ=255)

                                                             tACGAAATAAAAAAGGCTCCCTTCGGCTTCCCCTGACAAAATAGCCCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTACCCCGCCGTTAAat                            <  1:5128934/93‑1 (MQ=255)

                                                             tACGAAATAAAAAAGGCTACCTTCGGCTTACCCTGACAAAATAGCCCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTACCCCGCCGTTAAat                            >  1:8495369/1‑93 (MQ=255)

                                                              aCGAAATAAAAAAGGCTACCTTCGGCTTACCCTGACAAAATAGCCCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTACCCCGCCGTTAAatc                           >  2:8063044/1‑93 (MQ=255)

                                                                gAAATAAAAAAGGCTACCTTCGGCTTACCCTGACAAAATAGCCCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTACCCCGCCGTTAAatcat                         >  2:9349808/1‑93 (MQ=255)

                                                                gAAATAAAAAAGGCTACCTTCGGCTTACCCTGACAAAATAGCCCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTACCCCGCCGTTAAatcat                         >  1:4668734/1‑93 (MQ=255)

                                                                 aaaTAAAAAAGGCTCCCTTCGGCTTCCCCTGACAAAATAGCCCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTCCCCCGCCGTTAAatcatc                        <  1:2171737/93‑1 (MQ=255)

                                                                 aaaTAAAAAAGGCTCCCTTCGGCTTACCCTGACAAAATAGCCCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTACCCCGCCGTTAAatcatc                        <  2:1744913/93‑1 (MQ=255)

                                                                 aaaTAAAAAAGGCTACCTTCGGCTTACCCTGACAAAATAGCCCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTACCCCGCCGTTAAatcatc                        <  2:1432186/93‑1 (MQ=255)

                                                                  aaTAAAAAAGGCTACCTTCGGCTTACCCTGACAAAATAGCCCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTACCCCGCCGTTAAATCATcc                       >  1:162739/1‑93 (MQ=255)

                                                                  aaTAAAAAAGGCTACCTTCGGCTTACCCTGACAAAATAGCCCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTACCCCGCCGTTAAATCATcc                       >  2:2346182/1‑93 (MQ=255)

                                                                  aaTAAAAAAGGCTACCTTCGGCTTACCCTGACAAAATAGCCCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTACCCCGCCGTTAAATCATcc                       >  1:3893714/1‑93 (MQ=255)

                                                                       aaaaGGCTACCTTCGGCTTACCCTGACAAAATAGCCCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTACCCCGCCGTTAAATCATCCACCGa                  >  2:5962778/1‑93 (MQ=255)

                                                                       aaaaGGCTACCTTCGGCTTACCCTGACAAAATAGCCCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTACCCCGCCGTTAAATCATCCACCGa                  >  1:2400087/1‑93 (MQ=255)

                                                                        aaaGGCTACCTTCGGCTTACCCTGACAAAATAGCCCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTACCCCGCCGTTAAATCATCCACCGAg                 >  1:6954105/1‑93 (MQ=255)

                                                                         aaGGCTACCTTCGGCTTACCCTGACAAAATAGCCCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTACCCCGCCGTTAAATCATCCACCGAgc                >  1:9886213/1‑93 (MQ=255)

                                                                          aGGCTACCTTCGGCTTACCCTGACAAAATAGCCCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTACCCCGCCGTTAAATCATCCACCGAgcg               >  2:2210093/1‑93 (MQ=255)

                                                                              tACCTTCGGCTTCCCCTGACAAAATAGCCCTCTTCCCACGAAGAGGGCCGCTACCCTTAGTCCCCCGCCGTTAAATCATCCACCGAGCGCggg           <  2:1293731/93‑1 (MQ=255)

                                                                               cccTTCGCCTTCCCCTAACAAAATCGCCCTCTTCCCACGAAGAGGGCCGCAAACATTAGTCCCCCGCCGTTAAATCATCCACCGAGCGCGGGt          <  1:7643755/92‑1 (MQ=255)

                                                                                  ttCGGCTTACCCTGACAAAATAGCCCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTACCCCGCCGTTAAATCATCCACCGAGCGCGGGTCgg       >  1:6302816/1‑93 (MQ=255)

                                                                                   tgggCTTCCCTTAAAAAAATCCCCTTCTCCCCAGGAAGAGGGCCGCTACCCTTAGTCCCCCGCCGTTAAATCATCCACCGAGCGCGGGTCGGa      <  2:3717272/91‑1 (MQ=255)

                                                                                   tCGGCTTCCCCTGACAAAATAGCCCTCTCCCCACGAAGAGGGCCGCTACCCTTAGTACCCCGCCGTTAAATCATCCACCGAGCGCGGGTCGGa      <  1:4304800/93‑1 (MQ=255)

                                                                                   tCGGCTTACCCTGACAAAATAGCCCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTACCCCGCCGTTAAATCATCCACCGAGCGCGGGTCGGa      >  2:9841629/1‑93 (MQ=255)

                                                                                   tCGCCTTACCCTGACAAAATAGCTCTCTTCCCACGAAGAGGGCCGCTAACCTTAGCCCCCCGCCGTTAAATCATCCACCGAGCGCGGGTCGGa      <  1:2538200/93‑1 (MQ=255)

                                                                                    cGGCTTACCCTGACAAAATAGCCCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTACCCCGCCGTTAAATCATCCACCGAGCGCGGGTCGGAt     >  1:3274502/1‑93 (MQ=255)

                                                                                     ggCTTACCCTGACAAAATAGCCCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTACCCCGCCGTTAAATCATCCACCGAGCGCGGGTCGGATg    >  1:8164702/1‑93 (MQ=255)

                                                                                     gccTTGCCCTGAAAAAATACCCCTCTCCCCGCGAAGAGGGCCGCTAACCTTAGTCCCCCGCCGTTAAATCATCCACCGAGCGCGGGTCGGATg    <  2:8255088/91‑1 (MQ=255)

                                                                                      gCTTACCCTGACAAAATAGCCCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTACCCCGCCGTTAAATCATCCACCGAGCGCGGGTCGGATgc   >  1:9495918/1‑93 (MQ=255)

                                                                                      gCTTACCCTGACAAAATAGCCCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTACCCCGCCGTTAAATCATCCACCGAGCGCGGGTCGGATgc   <  2:1780289/93‑1 (MQ=255)

                                                                                      gCTTACCCTGACAAAATAGCCCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTACCCCGCCGTTAAATCATCCACCGAGCGCGGGTCGGATgc   >  1:3647132/1‑93 (MQ=255)

AGACAGTGGTGAAATTCATTCTCTGGGAACGGCAAAACCGCTGGAAGAATATCTACAGGATTACGAAATAAAAAAGGCTACCTTCGGCTTGCCCTGACAAAATAGCCCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTACCCCGCCGTTAAATCATCCACCGAGCGCGGGTCGGATGCG  >  NC_000913/3582578‑3582757

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 17 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`