BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,595,797	A→G	G61G (GGA→GGG)	yhhK →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,595,797	0	A	G	99.5%	1318.3 / ‑4.7	409	G61G (GGA→GGG)	yhhK	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (2/0); new base G (195/212); total (197/212)
Fisher's exact test for biased strand distribution p-value = 2.31e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 428 total aligned reads displayed.

CAGGTTGACGATAACCACCGTATCTACGCCGCGCGTTTTAACGAGCGCCTGCTCGCTGCCGTGCGGGTAACCTTAAGCGGCACCGAGGGAGCACTGGATTCCCTGCGCGTGCGGGAAGTCACCCGCCGTCGCGGTGTGGGGCAATATCTGCTGGAAGAGGTTTTGCGTAACAATCCTGG  >  NC_000913/3595708‑3595886

cAGGTTGACGATAACCACCGTATCTACGCCGCGCGTTTTAACGAGCGCCTGCTCGCTGCCGTGCGGGTAACCTTAAGCGGCACCGAGGGGGCa                                                                                        <  1:2163785/93‑1 (MQ=255)

cAGGTTGACGATAACCACCGTATCTACGCCGCGCGTTTTAACGAGCGCCTGCTCGCTGCCGTGCGGGTAACCTTAAGCGGCACCGAGGGGGCa                                                                                        <  1:5713745/93‑1 (MQ=255)

  ggTTGACGATAACCACCGTATCTACGCCGCGCGTTTTAACGAGCGCCTGCTCGCTGCCGTGCGGGTAACCTTAAGCGGCACCGAGGGGGCACt                                                                                      <  2:955700/93‑1 (MQ=255)

  ggTTGACGATAACCACCGTATCTACGCCGCGCGTTTTAACGAGCGCCTGCTCGCTGCCGTGCGGGTAACCTTAAGCGGCACCGAGGGGGCACt                                                                                      <  2:7922035/93‑1 (MQ=255)

  ggTTGACGATAACCACCGTATCTACGCCGCGCGTTTTAACGAGCGCCTGCTCGCTGCCGTGCGGGTAACCTTAAGCGGCACCGAGGGGGCACt                                                                                      <  1:9357910/93‑1 (MQ=255)

         gATAACCACCGTATCTACGCCGCGCGTTTTAACGAGCGCCTGCTCGCTGCCGTGCGGGTAACCTTAAGCGGCACCGAGGGGGCACTGGATTcc                                                                               >  2:2302994/1‑93 (MQ=255)

          aTAACCACCGTATCTACGCCGCGCGTTTTAACGAGCGCCTGCTCGCTGCCGTGCGGGTAACCTTAAGCGGCACCGAGGGGGCACTGGATTccc                                                                              <  1:1238675/93‑1 (MQ=255)

           tAACCACCGTATCTACGCCGCGCGTTTTAACGAGCGCCTGCTCGCTGCCGTGCGGGTAACCTTAAGCGGCACCGAGGGGGCACTGGATTCCCt                                                                             <  2:1687007/93‑1 (MQ=255)

             accaccGTATCTACGCCGCGCGTTTTAACGAGCGCCTGCTCGCTGCCGTGCGGGTAACCTTAAGCGGCACCGAGGGGGCACTGGATTCCCTgc                                                                           >  2:7444627/1‑93 (MQ=255)

             accaccGTATCTACGCCGCGCGTTTTAACGAGCGCCTGCTCGCTGCCGTGCGGGTAACCTTAAGCGGCACCGAGGGGGCACTGGATTCCCTgc                                                                           <  1:6856115/93‑1 (MQ=255)

             accaccGTATCTACGCCGCGCGTTTTAACGAGCGCCTGCTCGCTGCCGTGCGGGTAACCTTAAGCGGCACCGAGGGGGCACTGGATTCCCTgc                                                                           >  1:2836875/1‑93 (MQ=255)

              ccaccGTATCTACGCCGCGCGTTTTAACGAGCGCCTGCTCGCTGCCGTGCGGGTAACCTTAAGCGGCACCGAGGGGGCACTGGATTCCCTgcg                                                                          >  2:6522532/1‑93 (MQ=255)

               caccGTATCTACGCCGCGCGTTTTAACGAGCGCCTGCTCGCTGCCGTGCGGGTAACCTTAAGCGGCACCGAGGGGGCACTGGATTCCCTgcgc                                                                         >  1:10019801/1‑93 (MQ=255)

                accGTATCTACGCCGCGCGTTTTAACGAGCGCCTGCTCGCTGCCGTGCGGGTAACCTTAAGCGGCACCGAGGGGGCACTGGATTCCCTGcgcg                                                                        <  2:3200775/93‑1 (MQ=255)

                 ccGTATCTACGCCGCGCGTTTTAACGAGCGCCTGCTCGCTGCCGTGCGGGTAACCTTAAGCGGCACCGAGGGGGCACTGGATTCCCTGCGCGt                                                                       >  1:364183/1‑93 (MQ=255)

                 ccGTATCTACGCCGCGCGTTTTAACGAGCGCCTGCTCGCTGCCGTGCGGGTAACCTTAAGCGGCACCGAGGGGGCACTGGATTCCCTGCGCGt                                                                       <  1:2250935/93‑1 (MQ=255)

                  cGTATCTACGCCGCGCGTTTTAACGAGCGCCTGCTCGCTGCCGTGCGGGTAACCTTAAGCGGCACCGAGGGGGCACTGGATTCCCTGCGCGTg                                                                      <  1:3410538/93‑1 (MQ=255)

                   gTATCTACGCCGCGCGTTTTAACGAGCGCCTGCTCGCTGCCGTGCGGGTAACCTTAAGCGGCACCGAGGGGGCACTGGATTCCCTGCGCGTGc                                                                     >  2:5125387/1‑93 (MQ=255)

                     aTCTACGCCGCGCGTTTTAACGAGCGCCTGCTCGCTGCCGTGCGGGTAACCTTAAGCGGCACCGAGGGGGCACTGGATTCCCTGCGCGTGCgg                                                                   <  1:4719252/93‑1 (MQ=255)

                      tCTACGCCGCGCGTTTTAACGAGCGCCTGCTCGCTGCCGTGCGGGTAACCTTAAGCGGCACCGAGGGGGCACTGGATTCCCTGCGCGTGCggg                                                                  >  1:5080230/1‑93 (MQ=255)

                       cTACGCCGCGCGTTTTAACGAGCGCCTGCTCGCTGCCGTGCGGGTAACCTTAAGCGGCACCGAGGGGGCACTGGATTCCCTGCGCGTGCGGGa                                                                 >  1:9811817/1‑93 (MQ=255)

                        tACGCCGCGCGTTTTAACGAGCGCCTGCTCGCTGCCGTGCGGGTAACCTTAAGCGGCACCGAGGGGGCACTGGATTCCCTGCGCGTGCGGGaa                                                                <  1:4050824/93‑1 (MQ=255)

                         aCGCCGCGCGTTTTAACGAGCGCCTGCTCGCTGCCGTGCGGGTAACCTTAAGCGGCACCGAGGGGGCACTGGATTCCCTGCGCGTGCGGGAAg                                                               <  2:5414816/93‑1 (MQ=255)

                          cgccgcGCGTTTTAACGAGCGCCTGCTCGCTGCCGTGCGGGTAACCTTAAGCGGCACCGAGGGGGCACTGGATTCCCTGCGCGTGCGGGAAGt                                                              <  1:9623903/93‑1 (MQ=255)

                          cgccgcGCGTTTTAACGAGCGCCTGCTCGCTGCCGTGCGGGTAACCTTAAGCGGCACCGAGGGGGCACTGGATTCCCTGCGCGTGCGGGAAGt                                                              >  1:2691942/1‑93 (MQ=255)

                          cgccgcGCGTTTTAACGAGCGCCTGCTCGCTGCCGTGCGGGTAACCTTAAGCGGCACCGAGGGGGCACTGGATTCCCTGCGCGTGCGGGAAGt                                                              >  2:9674580/1‑93 (MQ=255)

                             cgcgcgTTTTAACGAGCGCCTGCTCGCTGCCGTGCGGGTAACCTTAAGCGGCACCGAGGGGGCACTGGATTCCCTGCGCGTGCGGGAAGTCAc                                                           >  1:7737813/1‑93 (MQ=255)

                             cgcgcgTTTTAACGAGCGCCTGCTCGCTGCCGTGCGGGCAACCTTAAGCGGCACCGAGGGGGCACTGGATTCCCTGCGCGTGCGGGAAGTCAc                                                           >  2:4305579/1‑93 (MQ=255)

                              gcgcgTTTTCACGCGCGCCTGCTCGCTGCCGTGCGGGTCACCTTAGGCGGCAACGAGGGGGCCCTGGTTACCCTGCGCGTGCAGGGCGTCAcc                                                          <  2:7717328/93‑1 (MQ=255)

                              gcgcgTTTTAACGAGCGCCTGCTCGCTGCCGTGCGGGTAACCTTAAGCGGCACCGAGGGGGCACTGGATTCCCTGCGCGTGCGGGAAGTCAcc                                                          <  2:6173665/93‑1 (MQ=255)

                              gcgcgTTTTAACGAGCGCCTGCTCGCTGCCGTGCGGGTAACCTTAAGCGGCACCGAGGGGGCACTGGATTCCCTGCGCGTGCGGGAAGTCAcc                                                          <  2:1818875/93‑1 (MQ=255)

                               gggcttttAACGAGCGCCTGCTCGCTGCCGTGCCGGTAACCGTAAGCGGCACCGAGGGGGCACTGGATTCCCTGCGCGTGCGGGAAGTCAccc                                                         <  1:6727041/89‑1 (MQ=255)

                               cgcgTTTTAACGAGCGCCTGCTCGCTGCCGTGCGGGTAACCTTAAGCGGCACCGAGGGGGCACTGGATTCCCTGCGCGTGCGGGAAGTCAccc                                                         <  1:2905874/93‑1 (MQ=255)

                               cgcgTTTTAACGAGCGCCTGCTCGCTGCCGTGCGGGTAACCTTAAGCGGCACCGAGGGGGCACTGGATTCCCTGCGCGTGCGGGAAGTCAccc                                                         <  1:8003286/93‑1 (MQ=255)

                                 cgTTTTAACGAGCGCCTGCTCGCTGCCGTGCGGGTAACCTTAAGCGGCACCGAGGGGGCACTGGATTCCCTGCGCGTGCGGGAAGTCACccgc                                                       <  1:5375412/93‑1 (MQ=255)

                                 cgTTTTAACGAGCGCCTGCTCGCTGCCGTGCGGGTAACCTTAAGCGGCACCGAGGGGGCACTGGATTCCCTGCGCGTGCGGGAAGTCACccgc                                                       <  2:6978815/93‑1 (MQ=255)

                                 cgTTTTAACGAGCGCCTGCTCGCTGCCGTGCGGGTAACCTTAAGCGGCACCGAGGGGGCACTGGATTCCCTGCGCGTGCGGGAAGTCACccgc                                                       >  2:3401381/1‑93 (MQ=255)

                                   ttttAACGAGCGCCTGCTCGCTGCCGTGCGGGTAACCTTTAGCGGCACCGAGGGGGCACTGGATTCCCTGCGCGTGCGGGAAGTCACccgccg                                                     >  2:6014593/1‑93 (MQ=255)

                                   ttttAACGAGCGCCTGCTCGCTGCCGTGCGGGTAACCTTAAGCGGCACCGAGGGGGCACTGGATTCCCTGCGCGTGCGGGAAGTCACccgccg                                                     >  2:1419022/1‑93 (MQ=255)

                                   ttttAACGAGCGCCTGCTCGCTGCCGTGCGGGTAACCTTAAGCGGCACCGAGGGGGCACTGGATTCCCTGCGCGTGCGGGAAGTCACccgccg                                                     >  1:448927/1‑93 (MQ=255)

                                   ttttAACGAGCGCCTGCTCGCTGCCGTGCGGGTAACCTTAAGCGGCACCGAGGGAGCACTGGATTCCCTGCGCGTGCGGGAAGTCACccgccg                                                     >  1:845809/1‑93 (MQ=255)

                                    tttAACGCGCGCCTGCTCGCTGCCGTGCGGGTAACCTTAAGCGGCACCGAGGGGGCACTGGATTCCCTGCGCGTGCGGGAAGTCACCCGCCGt                                                    <  1:7136992/93‑1 (MQ=255)

                                    tttAACGAGCGCCTGCTCGCTGCCGTGCGGGTAACCTTAAGCGGCACCGAGGGGGCACTGGATTCCCTGCGCGTGCGGGAAGTCACCCGCCGt                                                    <  2:1745574/93‑1 (MQ=255)

                                    tttAACGAGCGCCTGCTCGCTGCCGTGCGGGTAACCTTAAGCGGCACCGAGGGGGCACTGGATTCCCTGCGCGTGCGGGAAGTCACCCGCCGt                                                    <  1:8606629/93‑1 (MQ=255)

                                     ttAACGAGCGCCTGCTCGCTGCCGTGCGGGTAACCTTAAGCGGCACCGAGGGGGCACTGGATTCCCTGCGCGTGCGGGAAGTCACCCGCCGTc                                                   <  1:6967716/93‑1 (MQ=255)

                                         cGAGCGCCTGCTCGCTGCCGTGCGGGTAACCTTAAGCGGCACCGAGGGGGCACTGGATTCCCTGCGCGTGCGGGAAGTCACCCGCCGTCGCgg                                               <  2:1094036/93‑1 (MQ=255)

                                            gcgcCTGCTCGCTGCCGTGCGGGTAACCTTAAGCGGCACCGAGGGGGCACTGGATTCCCTGCGCGTGCGGGAAGTCACCCGCCGTCGCGgtgt                                            <  2:2682931/93‑1 (MQ=255)

                                              gcCTGCTCGCTGCCGTGCGGGTAACCTTAAGCGGCACCGAGGGGGCACTGGATTCCCTGCGCGTGCGGGAAGTCACCCGCCGTCGCGGTGTgg                                          <  1:1919081/93‑1 (MQ=255)

                                              gcCTGCTCGCTGCCGTGCGGGTAACCTTAAGCGGCACCGAGGGGGCACTGGATTCCCTGCGCGTGCGGGAAGTCACCCGCCGTCGCGGTGTgg                                          >  2:8405759/1‑93 (MQ=255)

                                              gcCTGCTCGCTGCCGTGCGGGTAACCTTAAGCGGCACCGAGGGGGCACTGGATTCCCTGCGCGTGCGGGAAGTCACCCGCCGTCGCGGTGTgg                                          <  1:6523572/93‑1 (MQ=255)

                                               ccTGCTCGCTGCCGTGCGGGTAACCTTAAGCGGCACCGAGGGGGCACTGGATTCCCTGCGCGTGCGGGAAGTCACCCGCCGTCGCGGTGTggg                                         >  1:5801406/1‑93 (MQ=255)

                                                cTGCTCGCTGCCGTGCGGGTAACCTTAAGCGGCACCGAGGGGGCACTGGATTCCCTGCGCGTGCGGGAAGTCACCCGCCGTCGCGGTGTgggg                                        <  1:726979/93‑1 (MQ=255)

                                                 tGCTCGCTGCCGTGCGGGTAACCTTAAGCGGCACCGAGGGGGCACTGGATTCCCTGCGCGTGCGGGAAGTCACCCGCCGGCGCGGGGTGGGGc                                       >  2:3995709/1‑93 (MQ=255)

                                                   cTCGCTGCCGTGCGGGTAACCTTAAGCGGCACCGAGGGGGCACTGGATTCCCTGCGCGTGCGGGAAGTCACCCGCCGTCGCGGTGTGGGGCaa                                     >  1:8307750/1‑93 (MQ=255)

                                                   cTCGCTGCCGTGCGGGTAACCTTAAGCGGCACCGAGGGGGCACTGGATTCCCTGCGCGTGCGGGAAGTCACCCGCCGTCGCGGTGTGGGGCaa                                     <  1:491063/93‑1 (MQ=255)

                                                   cTCGCTGCCGTGCGGGTAACCTTAAGCGGCACCGAGGGGGCACTGGATTCCCTGCGCGTGCGGGAAGTCACCCGCCGTCGCGGTGTGGGGCaa                                     >  1:5891992/1‑93 (MQ=255)

                                                    tCGCTGCCGTGCGGGTAACCTTAAGCGGCACCGAGGGGGCACTGGATTCCCTGCGCGTGCGGGAAGTCACCCGCCGTCGCGGTGTGGGGCAat                                    <  2:4195715/93‑1 (MQ=255)

                                                    tCGCTGCCGTGCGGGTAACCTTAAGCGGCACCGAGGGGGCACTGGATTCCCTGCGCGTGCGGGAAGTCACCCGCCGTCGCGGTGTGGGGCAat                                    <  2:3043559/93‑1 (MQ=255)

                                                    tCGCTGCCGTGCGGGTAACCTTAAGCGGCACCGAGGGGGCACTGGATTCCCTGCGCGTGCGGGAAGTCACCCGCCGTCGCGGTGTGGGGCAat                                    <  1:3732405/93‑1 (MQ=255)

                                                     cGCTGCCGTGCGGGTAACCTTAAGCGGCACCGAGGGGGCACTGGATTCCCTGCGCGTGCGGGAAGTCACCCGCCGTCGCGGTGTGGGGCAata                                   >  2:927724/1‑93 (MQ=255)

                                                      gCTGCCGTGCGGGTAACTTTAAGTGGCACCGAGGGTTCACTGGATTCCCTGCGCGTGCGGGAGGTCCCCGGCCGTCGCGGTGTGGGGCAatat                                  <  2:7235251/93‑1 (MQ=255)

                                                      gCTGCCGTGCGGGTAACCTTAAGCGGCACCGAGGGGGCACTGGATTCCCTGCGCGTGCGGGAAGTCACCCGCCGTCGCGGTGTGGGGCAatat                                  >  1:1640528/1‑93 (MQ=255)

                                                      gCTGCCGTGCGGGTAACCTTAAGCGGCACCGAGGGGGCACTGGATTCCCTGCGCGTGCGGGAAGTCACCCGCCGTCGCGGTGTGGGGCAatat                                  <  1:4012050/93‑1 (MQ=255)

                                                       cTGCCGTGCGGGTAACCTTAAGCGGCACCGAGGGGGCACTGGATTCCCTGCGCGTGCGGGAAGTCACCCGCCGTCGCGGTGTGGGGCAATATc                                 <  1:720703/93‑1 (MQ=255)

                                                        tGCCGTGCGGGTAACCTTAAGCGGCACCGAGGGGGCACTGGATTCCCTGCGCGTGCGGGAAGTCACCCGCCGTCGCGGTGTGGGGCAATctct                                >  2:8720176/1‑93 (MQ=255)

                                                        tGCCGTGCGGGTAACCTTAAGCGGCACCGAGGGGGCACTGGATTCCCTGCGCGTGCGGGAAGTCACCCGCCGTCGCGGTGTGGGGCAATATct                                >  2:5295608/1‑93 (MQ=255)

                                                        tGCCGTGCGGGTAACCTTAAGCGGCACCGAGGGGGCACTGGATTCCCTGCGCGTGCGGGAAGTCACCCGCCGTCGCGGTGTGGGGCAATATct                                <  1:8877396/93‑1 (MQ=255)

                                                         gCCGTGCGGGTAACCTTAAGCGGCACCGAGGGGGCACTGGATTCCCTGCGCGTGCGGGAAGTCACCCGCCGTCGCGGTGTGGGGCAATATctg                               >  2:5248557/1‑93 (MQ=255)

                                                         gCCGTGCGGGTAACCTTAAGCGGCACCGAGGGGGCACTGGATTCCCTGCGCGTGCGGGAAGTCACCCGCCGTCGCGGTGTGGGGCAATATctg                               <  2:5056470/93‑1 (MQ=255)

                                                         gCCGTGCGGGTAACCTTAAGCGGCACCGAGGGGGCACTGGATTCCCTGCGCGTGCGGGAAGTCACCCGCCGTCGCGGTGTGGGGCAATATctg                               <  1:1988141/93‑1 (MQ=255)

                                                            gTGCGGGTAACCTTAAGCGGCACCGAGGGGGCACTGGATTCCCTGCGCGTGCGGGAAGTCACCCGCCGTCGCGGTGTGGGGCAATATctgctg                            >  1:8239564/1‑93 (MQ=255)

                                                             tGCGGGTAACCTTAAGCGGCACCGAGGGGGCACTGGATTCCCTGCGCGTGCGGGAAGTCACCCGCCGTCGCGGTGTGGGGCAATATCTGCTgg                           >  2:2818921/1‑93 (MQ=255)

                                                               cGGGTAACCTTAAGCGGCACCGAGGGGGCACTGGATTCCCTGCGCGTGCGGGAAGTCACCCGCCGTCGCGGTGTGGGGCAATATCTGCTGGaa                         <  2:2065152/93‑1 (MQ=255)

                                                                gggTAACCTTAAGCGGCACCGAGGGGGCACTGGATTCCCTGCGCGTGCGGGAAGTCACCCGCCGTCGCGGTGTGGGGCAATATCTGCTGGAag                        <  1:3078294/93‑1 (MQ=255)

                                                                gggTAACCTTAAGCGGCACCGAGGGGGCACTGGATTCCCTGCGCGTGCGGGAAGTCACCCGCCGTCGCGGTGTGGGGCAATATCTGCTGGAag                        <  1:4285536/93‑1 (MQ=255)

                                                                gggTAACCTTAAGCGGCACCGAGGGGGCACTGGATTCCCTGCGCGTGCGGGAAGTCACCCGCCGTCGCGGTGTGGGGCAATATCTGCTGGAag                        >  2:6339029/1‑93 (MQ=255)

                                                                 ggTAACCTTAAGCGGCACCGAGGGGGCACTGGATTCCCTGCGCGTGCGGGAAGTCACCCGCCGTCGCGGTGTGGGGCAATATCTGCTGGAaga                       <  2:35778/93‑1 (MQ=255)

                                                                   tAACCTTAAGCGGCACCGAGGGGGCACTGGATTCCCTGCGCGTGCGGGAAGTCACCCGCCGTCGCGGTGTGGGGCAATATCTGCTGGAAGAgg                     >  1:7538306/1‑93 (MQ=255)

                                                                    aaCCTTAAGCGGCACCGAGGGGGCACTGGATTCCCTGCGCGTGCGGGAAGTCACCCGCCGTCGCGGTGTGGGGCAATATCTGCTGGAAGAGGt                    >  1:2355576/1‑93 (MQ=255)

                                                                     acgttAAGCGGCACCGAGGGGGCACTGGATTCCCTGCGCGTGCGGGAAGTCACCCGCCGTCGCGGTGTGGGGCAATATCTGCTGGAAGAGGtt                   >  1:9032354/4‑93 (MQ=255)

                                                                     aCCTTAAGCGGCACCGAGGGGGCACTGGATTCCCTGCGCGTGCGGGAAGTCACCCGCCGTCGCGGTGTGGGGCAATATCTGCTGGAAGAGGtt                   >  2:7547758/1‑93 (MQ=255)

                                                                     aCCTTAAGCGGCACCGAGGGGGCACTGGATTCCCTGCGCGTGCGGGAAGTCACCCGCCGTCGCGGTGTGGGGCAATATCTGCTGGAAGAGGtt                   <  1:6142069/93‑1 (MQ=255)

                                                                     aCCTTAAGCGGCACCGAGGGGGCACTGGATTCCCTGCGCGTGCGGGAAGTAACCCGCCGTCGCGGTGTGGGGCAATATCTGCTGGAAGAGGtt                   <  2:4820023/93‑1 (MQ=255)

                                                                      ccTTAAGCGGCACCGAGGGGGCACTGGATTCCCTGCGCGTGCGGGAAGTCACCCGCCGTCGCGGTGTGGGGCAATATCTGCTGGAAGAGGttt                  <  1:1125220/93‑1 (MQ=255)

                                                                      ccTTAAGCGGCACCGAGGGGGCACTGGATTCCCTGCGCGTGCGGGAAGTCACCCGCCGTCGCGGTGTGGGGCAATATCTGCTGGAAGAGGttt                  <  1:6254449/93‑1 (MQ=255)

                                                                       cTTAAGCGGCACCGAGGGGGCACTGGATTCCCTGCGCGTGCGGGAAGTCACCCGCCGTCGCGGTGTGGGGCAATATCTGCTGGAAGAGGtttt                 >  2:3835095/1‑93 (MQ=255)

                                                                        ttAAGCGGCACCGAGGGGGCACTGGATTCCCTGCGCGTGCGGGAAGTCACCCGCCGTCGCGGTGTGGGGCAATATCTGCTGGAAGAGGTTTTg                >  2:10018740/1‑93 (MQ=255)

                                                                        ttAAGCGGCACCGAGGGGGCACTGGATTCCCTGCGCGTGCGGGAAGTCACCCGCCGTCGCGGTGTGGGGCAATATCTGCTGGAAGAGGTTTTg                >  2:8102280/1‑93 (MQ=255)

                                                                         tAAGCGGCACCGAGGGGGCACTGGATTCCCTGCGCGTGCGGGAAGTCACCCGCCGTCGCGGTGTGGGGCAATATCTGCTGGAAGAGGTTTTGc               <  2:9807489/93‑1 (MQ=255)

                                                                            gCGGCACCGAGGGGGCACTGGATTCCCTGCGCGTGCGGGAAGTCACCCGCCGTCGCGGTGTGGGGCAATATCTGCTGGAAGAGGTTTTGCGTa            >  2:2521417/1‑93 (MQ=255)

                                                                               gCACCGGGGGGGAACTGGATTCCCTGCGCGTGCGGGAAGTCACCCGCCGTCGCGGTGTGGGGCAATATCTGCTGGACGAGGTTTTGAGTACCa         <  2:8987422/93‑1 (MQ=255)

                                                                                gaCCGGGGGGGCACTGGATTCCCTGCGCGTGCGGGAAGTCACCCGCCGTCGCGGTGTGGGGCAATATCTGCTGGAAGAGGTTTTGCGTAACaa        <  2:8596957/92‑1 (MQ=255)

                                                                                cACCGAGGGGGCACTGGATTCCCTGCGCGTGCGGGAAGTCACCCGCCGTCGCGGTGTGGGGCAATATCTGCTGGAAGAGGTTTTGCGTAACaa        <  1:1715862/93‑1 (MQ=255)

                                                                                 aCCGAGGGGGCACTGGATTCCCTGCGCGTGCGGGAAGTCACCCGCCGTCGCGGTGTGGGGCAATATCTGCTGGAAGAGGTTTTGCGTAACAAt       <  2:6784889/93‑1 (MQ=255)

                                                                                 aCCGAGGGGGCACTGGATTCCCTGCGCGTGCGGGAAGTCACCCGCCGTCGCGGTGTGGGGCAATATCTGCTGGAAGAGGTTTTGCGTAACAAt       >  2:3718377/1‑93 (MQ=255)

                                                                                  ccGAGGGGGCACTGGATTCCCTGCGCGTGCGGGAAGTCACCCGCCGTCGCGGTGTGGGGCAATATCTGCTGGAAGAGGTTTTGCGTAACAATc      >  2:2151067/1‑93 (MQ=255)

                                                                                  ccGAGGGGGCACTGGATTCCCTGCGCGTGCGGGAAGTCACCCGCCGTCGCGGTGTGGGGCAATATCTGCTGGAAGAGGTTTTGCGTAACAATc      >  2:131809/1‑93 (MQ=255)

                                                                                  ccGAGGGGGCACTGGATTCCCTGCGCGTGCGGGAAGTCACCCGCCGTCGCGGTGTGGGGCAATATCTGCTGGAAGAGGTTTTGCGTAACAATc      >  1:5429801/1‑93 (MQ=255)

                                                                                   cGAGGGGGCACTGGATTCCCTGCGCGTGCGGGAAGTCACCCGCCGTCGCGGTGTGGGGCAATATCTGCTGGAAGAGGTTTTGCGTAACAATcc     <  1:1444357/93‑1 (MQ=255)

                                                                                      ggggGCACTGGATGCCCTGCGCGTGCGGGAAGTCACCCGCCGTCGCGGTGTGGGGCAATATCTGCTGGAAGAGGTTTTGCGTAACAATCCTgg  <  1:8727994/93‑1 (MQ=255)

CAGGTTGACGATAACCACCGTATCTACGCCGCGCGTTTTAACGAGCGCCTGCTCGCTGCCGTGCGGGTAACCTTAAGCGGCACCGAGGGAGCACTGGATTCCCTGCGCGTGCGGGAAGTCACCCGCCGTCGCGGTGTGGGGCAATATCTGCTGGAAGAGGTTTTGCGTAACAATCCTGG  >  NC_000913/3595708‑3595886

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`