BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	416,945	A→G	T194A (ACG→GCG)	phoB →	positive response regulator for pho regulon

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	416,945	0	A	G	100.0%	791.9 / NA	245	T194A (ACG→GCG)	phoB	positive response regulator for pho regulon
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (152/93); total (152/93)

Only 100 of 257 total aligned reads displayed.

CACTTTTTTATGACGCATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCACGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCATGGTGCAGACCGTGCGCGGTACAGGATAT  >  NC_000913/416855‑417034

cACTTTTTTATGACGCATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACcgcgcg                                                                                         <  1:3072999/93‑1 (MQ=255)

 aCTTTTTTATGACGCATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCgg                                                                                        <  2:5094503/93‑1 (MQ=255)

 aCTTTTTTATGACGCATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCgg                                                                                        >  2:9151643/1‑93 (MQ=255)

 aCTTTTTTATGACGCATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCgg                                                                                        >  1:2031533/1‑93 (MQ=255)

  cTTTTTTATGACGCATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGt                                                                                       <  2:4638048/93‑1 (MQ=255)

  cTTTTTTATGACGCATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGt                                                                                       <  2:4564204/93‑1 (MQ=255)

   ttttttATGACGCATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTc                                                                                      >  2:2223451/1‑93 (MQ=255)

    tttttATGACGCATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCg                                                                                     >  1:6369099/1‑93 (MQ=255)

     ttttATGACGCATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGa                                                                                    >  1:1682716/1‑93 (MQ=255)

      tttATGACGCATCCGGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGAt                                                                                   <  1:7487357/93‑1 (MQ=255)

       ttATGACGCATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATg                                                                                  >  1:6619751/1‑93 (MQ=255)

        tATCACGCATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGt                                                                                 <  2:63191/93‑1 (MQ=255)

         aTGACGCATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTc                                                                                <  1:1264287/93‑1 (MQ=255)

          tGACGCATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTcc                                                                               >  2:7588831/1‑93 (MQ=255)

          tGACGCATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTcc                                                                               >  1:5474175/1‑93 (MQ=255)

          tGACGCATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGGATGTGGAAGACCGCGCGGGCGATGGcc                                                                               >  2:8983927/1‑93 (MQ=255)

           gACGCATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCca                                                                              >  1:1140403/1‑93 (MQ=255)

             cGCATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCcaca                                                                            <  2:6907119/93‑1 (MQ=255)

              gCATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACAt                                                                           <  1:3619328/93‑1 (MQ=255)

              gCATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACAt                                                                           <  2:2682451/93‑1 (MQ=255)

                aTCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGTACGCGCGGTCGAAGACCACCTtc                                                                         >  2:5530786/1‑93 (MQ=255)

                 tCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATtcg                                                                        >  2:5846746/1‑93 (MQ=255)

                      aGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGcc                                                                   >  1:3339057/1‑93 (MQ=255)

                       gcgcGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCt                                                                  >  2:4383189/1‑93 (MQ=255)

                       gcgcGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCt                                                                  <  1:4729139/93‑1 (MQ=255)

                       gcgcGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCt                                                                  <  1:5049001/93‑1 (MQ=255)

                       gcgcGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCt                                                                  >  1:8858591/1‑93 (MQ=255)

                          cgTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCg                                                               >  1:3908101/1‑93 (MQ=255)

                          cgTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCg                                                               <  1:2454223/93‑1 (MQ=255)

                            tgtACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTa                                                             >  1:9849871/1‑93 (MQ=255)

                             gtACAGCCTCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTaa                                                            <  1:9418029/93‑1 (MQ=255)

                             gtACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTaa                                                            >  1:842072/1‑93 (MQ=255)

                               aCAGCCGCGAGCAGCTGTTAAACGACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAg                                                          <  2:7236776/93‑1 (MQ=255)

                               aCAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAg                                                          >  1:6091157/1‑93 (MQ=255)

                                  gCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCAc                                                       <  2:287220/93‑1 (MQ=255)

                                      cgAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGa                                                   <  2:4979429/93‑1 (MQ=255)

                                      cgAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGCTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGa                                                   <  2:8427946/93‑1 (MQ=255)

                                       gAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAg                                                  >  2:6579988/1‑93 (MQ=255)

                                       gAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAg                                                  >  2:1830752/1‑93 (MQ=255)

                                         gcagcTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGcc                                                >  2:1137154/1‑93 (MQ=255)

                                         gcagcTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGcc                                                >  2:3006118/1‑93 (MQ=255)

                                           agcTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCcg                                              >  1:7697130/1‑93 (MQ=255)

                                            gcTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCcgg                                             >  1:8323910/1‑93 (MQ=255)

                                            gcTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCcgg                                             <  2:1259216/93‑1 (MQ=255)

                                            gcTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCcgg                                             >  1:131123/1‑93 (MQ=255)

                                             cTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCcggc                                            >  1:4595949/1‑93 (MQ=255)

                                               gTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCcggcgg                                          >  1:2774029/1‑93 (MQ=255)

                                                ttAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCggg                                         >  1:5011610/1‑93 (MQ=255)

                                                  aaaCCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCa                                       <  1:6866850/93‑1 (MQ=255)

                                                  aaaCCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCa                                       >  2:5178880/1‑93 (MQ=255)

                                                   aaCCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCAt                                      <  2:3806537/93‑1 (MQ=255)

                                                      cACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGTGTAAAGCACTGGAGCCCGGCGGGCATGAc                                   >  2:1629373/1‑93 (MQ=255)

                                                      cACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGAc                                   <  1:8089654/93‑1 (MQ=255)

                                                       aCGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGAcc                                  >  1:1116603/1‑93 (MQ=255)

                                                          tCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCa                               <  2:7962408/93‑1 (MQ=255)

                                                          tCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCa                               >  2:8944780/1‑93 (MQ=255)

                                                          tCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCa                               <  2:3732147/93‑1 (MQ=255)

                                                           cTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCAt                              <  1:6956088/93‑1 (MQ=255)

                                                            tGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCATg                             >  1:5641365/1‑93 (MQ=255)

                                                            tGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCATg                             >  1:4641570/1‑93 (MQ=255)

                                                             ggggAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCATgg                            <  1:186534/93‑1 (MQ=255)

                                                             ggggAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCATgg                            >  1:7221594/1‑93 (MQ=255)

                                                              gggAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCATGGt                           >  2:9394998/1‑93 (MQ=255)

                                                              gggAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCATGGt                           >  1:8242266/1‑93 (MQ=255)

                                                              gggAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCATGGt                           <  2:2520769/93‑1 (MQ=255)

                                                               ggAACTAAGGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATACGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCCTgtcg                          >  2:9990057/1‑90 (MQ=255)

                                                               ggAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCATGGTg                          <  1:7004801/93‑1 (MQ=255)

                                                                gAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCATGGTGc                         >  2:262980/1‑93 (MQ=255)

                                                                gAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCATGGTGc                         <  2:1685752/93‑1 (MQ=255)

                                                                 aaCTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCATGGTGCa                        <  1:7234546/93‑1 (MQ=255)

                                                                 aaCTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCATGGTGCa                        <  2:1607421/93‑1 (MQ=255)

                                                                 aaCTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGAATGGTGCa                        >  2:3058418/1‑93 (MQ=255)

                                                                    tAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCATGGTGCAGAc                     <  1:2755039/93‑1 (MQ=255)

                                                                    tAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCATGGTGCAGAc                     <  1:911538/93‑1 (MQ=255)

                                                                    tAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCATGGTGCAGAc                     >  1:3143351/1‑93 (MQ=255)

                                                                    tAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCATGGTGCAGAc                     >  1:4046306/1‑93 (MQ=255)

                                                                     aaCGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCATGGTGCAGAcc                    >  1:4431523/1‑93 (MQ=255)

                                                                      aCGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCATGGTGCCGCCCg                   >  2:2831612/1‑93 (MQ=255)

                                                                       cGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCATGGTGCAGACCgg                  >  2:8649719/1‑92 (MQ=255)

                                                                       cGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCATGGTGCAGACCGt                  >  1:8720606/1‑93 (MQ=255)

                                                                       cGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCATGGTGCAGACCGt                  >  1:9520326/1‑93 (MQ=255)

                                                                         tgtATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCATGGTGCAGACCGTgc                <  2:2450159/93‑1 (MQ=255)

                                                                         tgtATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCATGGTGCAGACCGTgc                >  1:6783225/1‑93 (MQ=255)

                                                                           tATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCATGGTGCAGACCGTgcgc              >  2:7417166/1‑93 (MQ=255)

                                                                           tATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCACGGCGGGCATGATCGCATGGTGCAGACCGTgcgc              >  2:770334/1‑93 (MQ=255)

                                                                            aTGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCATGGTGCAGACCGTGcgcg             >  1:4667238/1‑93 (MQ=255)

                                                                            aTGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCAGGGTGCAGACCGTGcgcg             >  1:8952041/1‑93 (MQ=255)

                                                                              gtgGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCATGGTGCAGACCGTGCGCGGt           >  2:6549745/1‑93 (MQ=255)

                                                                              gtgGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCATGGTGCAGACCGTGCGCGGt           <  2:35133/93‑1 (MQ=255)

                                                                               tgGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCATGGTGCAGACCGTGCGCGGTa          <  1:5668952/93‑1 (MQ=255)

                                                                                ggAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCATGGTGCAGACCGTGCGCGGTAc         >  2:4106375/1‑93 (MQ=255)

                                                                                   aGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCATGGTGCAGACCGTGCGCGGTACAgg      >  1:6425404/1‑93 (MQ=255)

                                                                                   aGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCATGGTGCAGACCGTGCGCGGTACAga      >  1:7980448/1‑92 (MQ=255)

                                                                                   aGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACAGCATGGTGCAGACCGTGCGCGGTACAgg      >  1:5550663/1‑93 (MQ=255)

                                                                                    gACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCATGGTGCAGACCGTGCGCGGTACAGGa     >  1:2341048/1‑93 (MQ=255)

                                                                                    gACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCATGGTGCAGACCGTGCGCGGTACAGGa     >  2:606696/1‑93 (MQ=255)

                                                                                    gACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCATGGTGCAGACCGTGCGCGGTACAGGa     <  2:7868472/93‑1 (MQ=255)

                                                                                     aCCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCATGGTGCAGACCGTGCGCGGTACAGGat    >  2:2590072/1‑93 (MQ=255)

                                                                                     aCCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCATGGTGCAGACCGTGCGCGGTACAGGat    >  2:9759410/1‑93 (MQ=255)

                                                                                      ccGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCATGGTGCAGACCGTGCGCGGTACAGGata   >  1:3758847/1‑93 (MQ=255)

CACTTTTTTATGACGCATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCACGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCATGGTGCAGACCGTGCGCGGTACAGGATAT  >  NC_000913/416855‑417034

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`