Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,667,150 A→G intergenic (‑332/‑72) yhjA ← / → treF putative cytochrome C peroxidase/cytoplasmic trehalase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,667,1500AG94.4% 1699.0 / 56.8 592intergenic (‑332/‑72)yhjA/treFputative cytochrome C peroxidase/cytoplasmic trehalase
Reads supporting (aligned to +/- strand):  ref base A (15/18);  new base G (271/288);  total (286/306)
Fisher's exact test for biased strand distribution p-value = 8.58e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01

Only 100 of 628 total aligned reads displayed.

AAATCGGTATTTTTATAAATTCCATTGATATTAGTGCGTTATATTTTTTGACAGGTTAATAAACGTGATCCACCGCACGCTTTGTCGCCCACCAGGCGGAGCGAATGACTACCCTTAAAGAAAAGCCGATAATTAGCGACGAATTTCGGAGGTTGGATCCTTATGCTCAATCAGAAAATTC  >  NC_000913/3667060‑3667240
                                                                                          |                                                                                          
 aaTCGGTATTTTTATAAATTCCATTGATATTAGTGCGTTATATTTTTTGACAGGTTAATAAACGTGATCCACCGCACGCTTTGTCGCccgcca                                                                                         >  2:3864579/1‑93 (MQ=255)
 aaTCGGTATTTTTATAAATTCCATTGATATTAGTGCGTTATATTTTTTGACAGGTTAATAAACGTGATCCACCGCACGCTTTGTCGCccgcca                                                                                         >  2:8735665/1‑93 (MQ=255)
  aTCGGTATTTTTATAAATTCCATTGATATTAGTGCGTTATATTTTTTGACAGGTTAATAAACGTGATCCACCGCACGCTTTGTCGCCCGCCAg                                                                                        >  2:2234238/1‑93 (MQ=255)
   tCGGTATTTTTATAAATTCCATTGATATTAGTGCGTTATATTTTTTGACAGGTTAATAAACGTGATCCACCGCACGCTTTGTCGCCCGCCAgg                                                                                       <  2:1836898/93‑1 (MQ=255)
    cGGTATTTTTATAAATTCCATTGATATTAGTGCGTTATATTTTTTGACAGGTTAATAAACGTGATCCACCGCACGCTTTGTCGCCCGCCAGGc                                                                                      <  2:7576705/93‑1 (MQ=255)
      gTATTTTTATAAATTCCATTGATATTAGTGCGTTATATTTTTTGACAGGTTAATAAACGTGATCCACCGCACGCTTTGTCGCCCGCCAGGCgg                                                                                    >  2:5876675/1‑93 (MQ=255)
       tATTTTTATAAATTCCATTGATATTAGTGCGTTATATTTTTTGACAGGTTAATAAACGTGATCCACCGCTCGCTTTGTCGCCCGCCAGGCGGa                                                                                   >  2:7233464/1‑93 (MQ=255)
       tATTTTTATAAATTCCATTGATATTAGTGCGTTATATTTTTTGACAGGTTAATAAACGTGATCCACCGCACGCTTTGTCGCCCGCCAGGCGGa                                                                                   >  2:2830269/1‑93 (MQ=255)
       tATTTTTATAAATTCCATTGATATTAGTGCGTTATATTTTTTGACAGGTTAATAAACGTGATCCACCGCACGCTTTGTCGCCCGCCAGGCGGa                                                                                   >  1:2666419/1‑93 (MQ=255)
       tATTTTTATAAATTCCATTGATATTAGTGCGTTATATTTTTTGACAGGTTAATAAACGTGATCCACCGCACGCTTTGTCGCCCACCAGGCGGa                                                                                   >  2:4540621/1‑93 (MQ=255)
        aTTTTTATAAATTCCATTGATATTAGTGCGTTATATTTTTTGACAGGTTAATAAACGTGATCCACCGCACGCTTTGTCGCCCGCCAGGCGGAg                                                                                  <  1:9291572/93‑1 (MQ=255)
         tttttATAAATTACATTGACATTAGTGCGTTATATTTTTTGCCAGGTTAATAAACGTGATCCACCGCACGCTTTGTCGCCCGCCAGGCGGAgg                                                                                 >  1:2984447/1‑92 (MQ=255)
          ttttATAAATTCCATTGATATTAGTGCGTTATATTTTTTGACAGGTTAATAAACGTGATCCACCGCACGCTTTGTCGCCCGCCAGGCGGAGCg                                                                                >  1:7754160/1‑93 (MQ=255)
           tttATTAATTCCATTGATATTAGTGCGTTATATTTTTTGACAGGTTAATAAACGTGATCCACCGCACGCTTTGTCGCCCACCAGGCGGAGCGa                                                                               <  1:3577670/93‑1 (MQ=255)
           tttATAAATTCCATTGATATTAGTGCGTTATATTTTTTGACAGGTTAATAAACGTGATCCACCGCACGCTTTGTCGCCCGCCAGGCGGAGCGa                                                                               <  2:205026/93‑1 (MQ=255)
            ttATAAATTCCATTGATATTAGTGCGTTATATTTTTTGACAGGTTAATAAACGTGATGCACCGCACGCTTTGTCGCCCGCCAGGCGGAGCGaa                                                                              <  1:918879/93‑1 (MQ=255)
            ttATAAATTCCATTGATATTAGTGCGTTATATTTTTTGACAGGTTAATAAACGTGATCCACCGCACGCTTTGTCGCCCGCCAGGCGGAGCGag                                                                              <  2:6166597/93‑2 (MQ=255)
            ttATAAATTCCATTGATATTAGTGCGTTATATTTTTTGACAGGTTAATAAACGTGATCCACCGCACGCTTTGTCGCCCGCCAGGCGGAGCGaa                                                                              <  2:4698530/93‑1 (MQ=255)
            ttATAAATTCCATTGATATTAGTGCGTTATATTTTTTGACAGGTTAATAAACGTGATCCACCGCACGCTTTGTCGCCCGCCAGGCGGAGCGaa                                                                              <  2:5427064/93‑1 (MQ=255)
            ttATAAATTCCATTGATATTAGTGCGTTATATTTTTTGACAGGTTAATAAACGTGATCCACCGCACGCTTTGTCGCCCGCCAGGCGGAGCGaa                                                                              <  1:6577173/93‑1 (MQ=255)
            ttATAAATTCCATTGATATTAGTGCGTTATATTTTTTGACAGGTTAATAAACGTGATCCACCGCACGCTTTGTCGCCCGCCAGGCGGAGCGaa                                                                              <  2:2520428/93‑1 (MQ=255)
            ttATAAATTCCATTGATATTAGTGCGTTATATTTTTTGACAGGTTAATAAACGTGATCCACCGCACGCTTTGTCGCCCGCCAGGCGGAGCGaa                                                                              <  2:3294488/93‑1 (MQ=255)
            ttATAAATTCCATTGATATTAGTGCGTTATATTTTTTGACAGGTTAATAAACGTGATCCACCGCACGCTTTGTCGCCCGCCAGGCGGAGCGaa                                                                              <  1:497658/93‑1 (MQ=255)
                 aaTTCCATTGATATTAGTGCGTTATATTTTTTGACAGGTTAATAAACGTGATCCACCGCACGCTTTGTCGCCCGCCAGGCGGAGCGAATGACt                                                                         >  2:367635/1‑93 (MQ=255)
                  aTTCCATTGATATTAGTGCGTTATATTTTTTGACAGGTTAATAAACGTGATCCACCGCACGCTTTGTCGCCCGCCAGGCGGAGCGAATGACTa                                                                        >  1:5326510/1‑93 (MQ=255)
                  aTTCCATTGATATTAGTGCGTTATATTTTTTGACAGGTTAATAAACGTGATCCACCGCACGCTTTGTCGCCCGCCAGGCGGAGCGAATGACTa                                                                        <  1:6796106/93‑1 (MQ=255)
                    tCCATTGATATTAGTGCGTTATATTTTTTGACAGGTTAATAAACGTGATCCACCGCACGCTTTGTCGCCCGCCAGGCGGAGCGAATGACTAcc                                                                      <  1:9782623/93‑1 (MQ=255)
                      cATTGATATTAGTGCGTTATATTTTTTGACAGGTTAATAAACGTGATCCACCGCACGCTTTGTCGCCCGCCAGGCGGAGCGAATGACTACCCt                                                                    <  1:449140/93‑1 (MQ=255)
                      cATTGATATTAGTGCGTTATATTTTTTGACAGGTTAATAAACGTGATCCACCGCACGCTTTGTCGCCCGCCAGGCGGAGCGAATGACTACCCt                                                                    <  1:8373739/93‑1 (MQ=255)
                       aTTGATATTAGTGCGTTATATTTTTTGACAGGTTAATAAACGTGATCCACCGCACGCTTTGTCGCCCGCCAGGCGGAGCGAATGACTACCCtt                                                                   <  2:1679969/93‑1 (MQ=255)
                        ttGATATTAGTGCGTTATATTTTTTGACAGGTTAATAAACGTGATCCACCGCACGCTTTGTCGCCCGCCAGGCGGAGCGAATGACTACCCTTa                                                                  >  1:1889146/1‑93 (MQ=255)
                        ttGATATTAGTGCGTTATATTTTTTGACAGGTTAATAAACGTGATCCACCGCACGCTTTGTCGCCCGCCAGGCGGAGCGAATGACTACCCTTa                                                                  >  1:9558830/1‑93 (MQ=255)
                         tGATATTAGTGCGTTATATTTTTTGACAGGTTAATAAACGTGATCCACCGCACGCTTTGTCGCCCGCCAGGCGGAGCGAATGACTACCCTTaa                                                                 >  2:10026534/1‑93 (MQ=255)
                         tGATATTAGTGCGTTATATTTTTTGACAGGTTAATAAACGTGATCCACCGCACGCTTTGTCGCCCGCCAGGCGGAGCGAATGACTACCCTTaa                                                                 >  1:7332048/1‑93 (MQ=255)
                         tGATATTAGTGCGTTATATTTTTTGACAGGTTAATAAACGTGATCCACCGCACGCTTTGTCGCCCGCCAGGCGGAGCGAATGACTACCCTTaa                                                                 <  1:8487828/93‑1 (MQ=255)
                         tGATATTAGTGCGTTATATTTTTTGACAGGTTAATAAACGTGATCCACCGCACGCTTTGTCGCCCGCCAGGCGGAGCGAATGACTACCCTTaa                                                                 >  2:7946645/1‑93 (MQ=255)
                         tGATATTAGTGCGTTATATTTTTTGACAGGTTAATAAACGTAATCCACCGCACGCTTGGTCGCCCGCCAGGCGGAGCGAATGACTACCCTTaa                                                                 <  1:10011344/93‑1 (MQ=255)
                          gATATTAGTGCGTTATATTTTTTGACAGGTTAATAAACGTGATCCACCGCACGCTTTGTCGCCCGCCAGGCGGAGCGAATGACTACCCTTaaa                                                                >  2:9300064/1‑93 (MQ=255)
                            tatTAGTGCGTTATATTTTTTGACAGGTTAATAAACGTGATCCACCGCACGCTTTGTCGCCCGCCAGGCGGAGCGAATGACTACCCTTAAAGa                                                              <  1:4707811/93‑1 (MQ=255)
                            tatTAGTGCGTTATATTTTTTGACAGGTTAATAAACGTGATCCACCGCACGCTTTGTCGCCCGCCAGGCGGAGCGAATGACTACCCTTAAAGa                                                              <  1:9360419/93‑1 (MQ=255)
                             atTAGTGCGTTATATTTTTTGACAGGTTAATAAACGTGATCCACCGCACGCTTTGTCGCCCGCCAGGCGGAGCGAATGACTACCCTTAAAGaa                                                             >  2:8447098/1‑93 (MQ=255)
                               tAGTGCGTTATATTTTTTGACAGGTTAATAAACGTGATCCACCGCACGCTTTGTCGCCCGCCAGGCGGAGCGAATGACTACCCTTAAAGaaaa                                                           >  2:8898930/1‑93 (MQ=255)
                                 gTGCGTTATATTTTTTGACAGGTTAATAAACGTGATCCACCGCACGCTTTGTCGCCCGCCAGGCGGAGCGAATGACTACCCTTAAAGAAAAGc                                                         >  2:4857177/1‑93 (MQ=255)
                                 gTGCGTTATATTTTTTGACAGGTTAATAAACGTGATCCACCGCACGCTTTGTCGCCCGCCAGGCGGAGCGAATGACAACCCTTAAAGAAAAGc                                                         <  2:8577581/93‑1 (MQ=255)
                                   gCGTTATATTTTTTGACAGGTTAATAAACGTGATCCACCGCACGCTTTGTCGCCCGCCAGGCGGAGCGAATGACTACCCTTAAAGAAAAGCCg                                                       <  2:3587613/93‑1 (MQ=255)
                                   gCGTTATATTTTTTGACAGGTTAATAAACGTGATCCACCGCACGCTTTGTCGCCCGCCAGGCGGAGCGAATGACTACCCTTAAAGAAAAGCCg                                                       <  1:5664656/93‑1 (MQ=255)
                                     gTTATATTTTTTGACAGGTTAATAAACGTGATCCACCGCACGCTTTGTCGCCCGCCAGGCGGAGCGCATGACTACCCTTAAAGAAAAGCCGaa                                                     >  2:7737427/1‑92 (MQ=255)
                                      ttATATTTTTTGACAGGTTAATAAACGTGATCCACCGCACGCTTTGTCGCCCGCCAGGCGGAGCGAATGACTACCCTTAAAGAAAAGCCGATa                                                    >  1:747465/1‑93 (MQ=255)
                                      ttATATTTTTTGACAGGTTAATAAACGTGATCCACCGCACGCTTTGTCGCCCGCCAGGCGGAGCGAATGACTACCCTTAAAGAAAAGCCGATa                                                    <  2:6048977/93‑1 (MQ=255)
                                       tataTTTTTTGACAGGTTAATAAACTTTATCCACCGCACGCTTTGTCGCCCGCCAGGCGAAGCGAATGACTCCCCTTAAAGAAAATCCGATaa                                                   <  2:7122881/93‑1 (MQ=255)
                                           ttttttGACAGGTTAATAAACGTGATCCACCGCACGCTTTGTCGCCCGCCAGGCGGAGCGAATGACTACCCTTAAAGAAAAGCCGATAATTAg                                               >  1:2482510/1‑93 (MQ=255)
                                            tttttGACAGGTTAATAAACGTGATCCACCGCACGCTTTGTCGCCCGCCAGGCGGAGCGAATGACTACCCTTAAAGAAAAGCCGATAATTAGc                                              <  2:8995721/93‑1 (MQ=255)
                                             ttttGACAGGTTAATAAACGTGATCCACCGCACGCTTTGTCGCCCGCCAGGCGGAGCGAATGACTACCCTTAAAGAAAAGCCGATAATTAGcg                                             >  2:9102478/1‑93 (MQ=255)
                                              tttGACAGGTTAATAAACGTGATCCACCGCACGCTTTGTCGCCCGCCAGGCGGAGCGAATGACTACCCTTAAAGAAAAGCCGATAATTAGcga                                            <  1:7631073/93‑1 (MQ=255)
                                                 gACAGGTTAATAAACGTGATCCACCGCACGCTTTGTCGCCCGCCAGGCGGAGCGAATGACTACCCTTAAAGAAAAGCCGATAATTAGcgacga                                         >  1:1658850/1‑93 (MQ=255)
                                                 gACAGGTTAATAAACGTGACCCACCGCACGCTTTGTCGCCCGCCAGGCGGAGCGAATGACTACCCTTAAAGAAAAGCCGATAATTAGcgacga                                         <  2:9522537/93‑1 (MQ=255)
                                                  aCAGGTTAATAAACGTGATCCACCGCACGCTTTGTCGCCCGCCAGGCGGAGCGAATGACTACCCTTAAAGAAAAGCCGATAATTAGCGACGaa                                        <  1:3229519/93‑1 (MQ=255)
                                                   cAGGTTAATAAACGTGATCCACCGCACGCTTTGTCGCCCGCCAGGCGGAGCGAATGACTACCCTTAAAGAAAAGCCGATAATTAGCGACGAAt                                       >  1:1116236/1‑93 (MQ=255)
                                                   cAGGTTAATAAACGTGATCCACCGCACGCTTTGTCGCCCGCCAGGCGGAGCGAATGACTACCCTTAAAGAAAAGCCGATAATTAGCGACGAAt                                       <  1:1242533/93‑1 (MQ=255)
                                                    aGGTTAATAAACGTGATCCACCGCACGCTTTGTCGCCCGCCAGGCGGAGCGAATGACTACCCTTAAAGAAAAGCCGATAATTAGCGACGAAtt                                      >  2:3457662/1‑93 (MQ=255)
                                                    aGGTTAATAAACGTGATCCACCGCACGCTTTGTCGCCCACCAGGCGGAGCGAATGACTACCCTTAAAGAAAAGCCGATAATTAGCGACGAAtt                                      <  1:8672188/93‑1 (MQ=255)
                                                     ggTTAATAAACGTGATCCACCGCACGCTTTGTCGCCCGCCAGGCGGAGCGAATGACTACCCTTAAAGAAAAGCCGATAATTAGCGACGAAttt                                     <  2:4045874/93‑1 (MQ=255)
                                                     ggTTAATAAACGTGATCCACCGCACGCTTTGTCGCCCGCCAGGCGGAGCGAATGACTACCCTTAAAGAAAAGCCGATAATTAGCGACGAAttt                                     <  2:1369513/93‑1 (MQ=255)
                                                     ggTTAATAAACGTGATCCACCGCACGCTTTGTCGCCCGCCAGGCGGAGCGAATGACTACCCTTAAAGAAAAGCCGATAATTAGCGACGAAttt                                     <  2:2635871/93‑1 (MQ=255)
                                                     ggTTAATAAACGTGATCCACCGCACGCTTTGTCGCCCGCCAGGCGGAGCGAATGACTACCCTTAAAGAAAAGCCGATAATTAGCGACGAAttt                                     >  1:3502281/1‑93 (MQ=255)
                                                     ggTTAATAAACGTGATCCACCGCACGCTTTGTCGCCCGCCAGGCGGAGCGAATGACTACCCTTAAAGAAAAGCCGATAATTAGCGACGAAttt                                     >  1:3741455/1‑93 (MQ=255)
                                                      gTTAATAAACGTGATCCACCGCACGCTTTGTCGCCCGCCAGGCGGAGCGAATGACTACCCTTAAAGAAAAGCCGATAATTAGCGACGAATTTc                                    >  1:2100545/1‑93 (MQ=255)
                                                        taataaACGTGATCCACCGCACGCTTTGTCGCCCGCCAGGCGGAGCGAATGACTACCCTTAAAGAAAAGCCGATAATTAGCGACGAATTTCgg                                  >  2:9787226/1‑93 (MQ=255)
                                                        taataaACGTGATCCACCGCACGCTTTGTCGCCCGCCAGGCGGAGCGAATGACTACCCTTAAAGAAAAGCCGATAATTAGCGACGAATTTCgg                                  >  2:15601/1‑93 (MQ=255)
                                                         aataaACGTGATCCACCGCACGCTTTGTCGCCCGCCAGGCGGAGCGAATGACTACCCTTAAAGAAAAGCCGATAATTAGCGACGAATTTCGGa                                 <  1:6246149/93‑1 (MQ=255)
                                                         aataaACGTGATCCACCGCACGCTTTGTCGCCCGCCAGGCGGAGCGAATGACTACCCTTAAAGAAAAGCCGATAATTAGCGACGAATTTCGGa                                 >  2:2418561/1‑93 (MQ=255)
                                                         aataaACGTGATCCACCGCACGCTTTGTCGCCCACCAGGCGGAGCGAATGACTACCCTTAAAGAAAAGCCGATAATTAGCGACGAATTTCGGa                                 <  2:6991952/93‑1 (MQ=255)
                                                            aaaCGTGATCCACCGCACGCTTTGTCGCCCGCCAGGCGGAGCGAATGACTACCCTTAAAGAAAAGCCGATAATTAGCGACGAATTTCGGAGGt                              >  1:7915058/1‑93 (MQ=255)
                                                            aaaCGTGATCCACCGCACGCTTTGTCGCCCGCCAGGCGGAGCGAATGACTACCCTTAAAGAAAAGCCGATAATTAGCGACGAATTTCGGAGGt                              <  2:5333686/93‑1 (MQ=255)
                                                              aCGTGATCCACCGCACGCTTTGTCGCCCGCCAGGCGGAGCGAATGACTACCCTTAAAGAAAAGCCGATAATTAGCGACGAATTTCGGAGGTTg                            >  2:8306799/1‑93 (MQ=255)
                                                               cGTGATCCACCGCACGCTTTGTCGCCCGCCAGGCGGAGCGAATGACTACCCTTAAAGAAAAGCCGATAATTAGCGACGAATTTCGGAGGTTgg                           <  1:5875983/93‑1 (MQ=255)
                                                               cGTGATCCACCGCACGCTTTGTCGCCCGCCAGGCGGAGCGAATGACTACCCTTAAAGAAAAGCCGATAATTAGCGACGAATTTCGGAGGTTgg                           <  1:3912359/93‑1 (MQ=255)
                                                                  gATCCACCGCACGCTTTGTCGCCCGCCAGGCGGAGCGAATGACTACCCTTAAAGAAAAGCCGATAATTAGCGACGAATTTCGGAGGTTGGATc                        <  2:5074995/93‑1 (MQ=255)
                                                                   aTCCACCGCACGCTTTGTCGCCCGCCAGGCGGAGCGAATGACTACCCTTAAAGAAAAGCCGATAATTAGCGACGAATTTCGGAGGTTGGATcc                       <  2:6913180/93‑1 (MQ=255)
                                                                    tCCACCGCACGCTTTGTCGCCCGCCAGGCGGAGCGAATGACTACCCTTAAAGAAAAGCCGATAATTAGCGACGAATTTCGGAGGTTGGATCCt                      <  1:2197296/93‑1 (MQ=255)
                                                                    tCCACCGCACGCTTTGTCGCCCGCCAGGCGGAGCGAATGACTACCCTTAAAGAAAAGCCGATAATTAGCGACGAATTTCGGAGGTTGGATCCt                      <  1:8177101/93‑1 (MQ=255)
                                                                     ccACCGCACGCTTTGTCGCCCGCCAGGCGGAGCGAATGACTACCCTTAAAGAAAAGCCGATAATTAGCGACGAATTTCGGAGGTTGGATCCtt                     <  2:650324/93‑1 (MQ=255)
                                                                      cACCGCACGCTTTGTCGCCCGCCAGGCGGAGCGAATGACTACCCTTAAAGAAAAGCCGATAATTAGCGACGAATTTCGGAGGTTGGATCCTTa                    <  2:4375723/93‑1 (MQ=255)
                                                                      cACCGCACGCTTTGTCGCCCGCCAGGCGGAGCGAATGACTACCCTTAAAGAAAAGCCGATAATTAGCGACGAATTTCGGAGGTTGGATCCTTa                    <  2:9700559/93‑1 (MQ=255)
                                                                      cACCGCACGCTTTGTCGCCCGCCAGGCGGAGCGAATGACTACCCTTAAAGAAAAGCCGATAATTAGCGACGAATTTCGGAGGTTGGATCCTTa                    <  2:7362629/93‑1 (MQ=255)
                                                                      cACCGCACGCTTTGTCGCCCGCCAGGCGGAGCGAATGACTACCCTTAAAGAAAAGCCGATAATTAGCGACGAATTTCGGAGGTTGAATCCTTa                    <  1:4188157/93‑1 (MQ=255)
                                                                       cccGCACGCTTTGTCGCCCGCCAGGCGGAGCGAATGACTACCCTTAAAGAAAAGCCGATAATTAGCGACGAATTTCGGAGGTTGGATCCTTAt                   <  2:3052970/92‑1 (MQ=255)
                                                                       aCCGCACGCTTTGTCGCCCGCCAGGCGGAGCGAATGACTACCCTTAAAGAAAAGCCGATAATTAGCGACGAATTTCGGAGGTTGGATCCTTAt                   >  2:5517671/1‑93 (MQ=255)
                                                                       aCCGCACGCTTTGTCGCCCACCAGGCGGAGCGAATGACTACCCTTAAAGAAAAGCCGATAATTAGCGACGAATTTCGGAGGTTGGATCCTTAt                   <  1:6386254/93‑1 (MQ=255)
                                                                        ccGCACGCTTTGTCGCCCGCCAGGCGGAGCGAATGACTACCCTTAAAGAAAAGCCGATAATTAGCGACGAATTTCGGAGGTTGGATCCTTATg                  >  1:4587401/1‑93 (MQ=255)
                                                                        ccGCACGCTTTGTCGCCCGCCAGGCGGAGCGAATGACTACCCTTAAAGAAAAGCCGATAATTAGCGACGAATTTCGGAGGTTGGATCCTTATg                  >  1:6901465/1‑93 (MQ=255)
                                                                        ccGCACGCTTTGTCGCCCGCCAGGCGGAGCGAATGACTACCCTTAAAGAAAAGCCGATAATTAGCGACGAATTTCGGAGGTTGGATCCTTATg                  >  1:7132986/1‑93 (MQ=255)
                                                                        ccGCACGCTTTGTCGCCCGCCAGGCGGAGCGAATGACTACCCTTAAAGAAAAGCCGATAATTAGCGACGAATTTCGGAGGTTGGATCCTTATg                  >  1:7219224/1‑93 (MQ=255)
                                                                         cGCACGCTTTGTCGCCCGCCAGGCGGAGCGAATGACTACCCTTAAAGAAAAGCCGATAATTAGCGACGAATTTCGGAGGTTGGATCCTTATGc                 >  1:5150262/1‑93 (MQ=255)
                                                                         cGCACGCTTTGTCGCCCGCCAGGCGGAGCGAATGACTACCCTTAAAGAAAAGCCGATAATTAGCGACGAATTTCGGAGGTTGGATCCTTATGc                 >  2:5645534/1‑93 (MQ=255)
                                                                           cACGCTTTGTCGCCCACCAGGCGGAGCGAATGACTACCCTTAAAGAAAAGCCGATAATTAGCGACGAATTTCGGAGGTTGGATCCTTATGCTc               >  1:6054021/1‑93 (MQ=255)
                                                                               cTTTGTCGCCCGCCAGGCGGAGCGAATGACTACCCTTAAAGAAAAGCCGATAATTAGCGACGAATTTCGGAGGTTGGATCCTTATGCTCAATc           <  2:1182207/93‑1 (MQ=255)
                                                                               cTTTGTCGCCCGCCAGGCGGAGCGAATGACTACCCTTAAAGAAAAGCCGATAATTAGCGACGAATTTCGGAGGTTGGATCCTTATGCTCAATc           <  2:8126200/93‑1 (MQ=255)
                                                                               cTTTGTCGCCCGCCAGGCGGAGCGAATGACTACCCTTAAAGAAAAGCCGATAATTAGCGACGAATTTCGGAGGTTGGATCCTTATGCTCAATc           <  1:1426941/93‑1 (MQ=255)
                                                                                    tCGCCCGCCAGGCGGAGCGAATGACTACCCTTAAAGAAAAGCCGATAATTAGCGACGAATTTCGGAGGTTGGATCCTTATGCTCAATCAGaaa      >  1:6740240/1‑93 (MQ=255)
                                                                                          |                                                                                          
AAATCGGTATTTTTATAAATTCCATTGATATTAGTGCGTTATATTTTTTGACAGGTTAATAAACGTGATCCACCGCACGCTTTGTCGCCCACCAGGCGGAGCGAATGACTACCCTTAAAGAAAAGCCGATAATTAGCGACGAATTTCGGAGGTTGGATCCTTATGCTCAATCAGAAAATTC  >  NC_000913/3667060‑3667240

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: