Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,683,433 T→C Y1107C (TAC→TGC)  b3530 ← putative oxidoreductase subunit

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,683,4330TC94.9% 1026.9 / 28.5 353Y1107C (TAC→TGC) b3530putative oxidoreductase subunit
Reads supporting (aligned to +/- strand):  ref base T (6/12);  new base C (150/185);  total (156/197)
Fisher's exact test for biased strand distribution p-value = 4.66e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.23e-01

Only 100 of 371 total aligned reads displayed.

GTAAGGTATCAGCGGCTGCGGCGGTAAATCCATGTCACCCTGCCATCCGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGTAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCAGTTGGAAGTAACACGTCGTTCAAGTAATGCCCGCGCCGTGTAGCCGAA  >  NC_000913/3683342‑3683524
                                                                                           |                                                                                           
 tAAGGTATCAGCGGCTGCGGCGGTAAATCCATGTCACCCTGCCATCCGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCaa                                                                                           >  1:600712/1‑93 (MQ=255)
     gTATCAGCGGCTGCGGCGGTAAATCCATGTCACCCTGCCATCCGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCtt                                                                                       <  2:8690792/93‑1 (MQ=255)
     gTATCAGCGGCTGCGGCGGTAAATCCATGTCACCCTGCCATCCGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCtt                                                                                       <  2:8857417/93‑1 (MQ=255)
      tATCAGCGGCTGCGGCGGTAAATCCATGTCACCCTGCCATCCGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCttt                                                                                      <  2:4478837/93‑1 (MQ=255)
         cAGCGGCTGCGGCGGTAAATCCATGTCACCCTGCCATCCGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGc                                                                                   <  2:3076603/93‑1 (MQ=255)
          aGCGGCTGCGGCGGTAAATCCATGTCACCCTGCCATCCGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGGGCGCAATCTTTCGcc                                                                                  >  2:8203737/1‑93 (MQ=255)
             ggCTGCGGCGGTAAATCCATGTCACCCTGCCATCCGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCctgc                                                                               >  2:7729731/1‑93 (MQ=255)
             ggCTGCGGCGGTAAATCCATGTCACCCTGCCATCCGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCctgc                                                                               >  1:4289592/1‑93 (MQ=255)
             ggCTGCGGCGGTAAATCCATGTAACCCTGCCATCCGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCctgc                                                                               <  2:7865423/93‑1 (MQ=255)
              gCTGCGGCGGTAAATCCATGTCACCCTGCCATCCGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCctgct                                                                              <  1:9634167/93‑1 (MQ=255)
               cTGCGGCGGTAAATCCATGTCACCCTGCCATCCGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCctgctg                                                                             <  1:89289/93‑1 (MQ=255)
                tGCGGCGGTAAATCCATGTCACCCTGCCATCCGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTgg                                                                            <  1:4872349/93‑1 (MQ=255)
                tGCGGCGGTAAATCCATGTCACCCTGCCATCCGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTgg                                                                            <  1:9747148/93‑1 (MQ=255)
                 gcggcgGTAAATCCATGTCACCCTGCCATCCGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGa                                                                           >  1:2216944/1‑93 (MQ=255)
                 gcggcgGTAAATCCATGTCACCCTGCCATCCGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGa                                                                           >  1:3856341/1‑93 (MQ=255)
                 gcggcgGTAAATCCATGTCACCCTGCCATCCGGCGGCGGAATAACGGACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGa                                                                           <  1:2396818/93‑1 (MQ=255)
                  cggcggTAAATCCATGTCACCCTGCCATCCGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGat                                                                          <  1:5080489/93‑1 (MQ=255)
                  cggcggTAAATCCATGTCACCCTGCCATCCGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGat                                                                          >  1:1128843/1‑93 (MQ=255)
                    gcggTAAATCCATGTCACCCTGCCATCCGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGatat                                                                        <  2:3594374/93‑1 (MQ=255)
                    gcggTAAATCCATGTCACCCTGCCATCCGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGatat                                                                        >  1:7922687/1‑93 (MQ=255)
                       gTAAATCCATGTCTCCCTGACATCCGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCaa                                                                     <  1:8234863/93‑1 (MQ=255)
                       gTAAATCCATGTCACCCTGCCATCCGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCaa                                                                     >  1:3418960/1‑93 (MQ=255)
                        tAAATCCATGTCACCCTGCCATCCGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAAt                                                                    <  2:8419957/93‑1 (MQ=255)
                        tAAATCCATGTCACCCTGCCATCCGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAAt                                                                    <  2:9360683/93‑1 (MQ=255)
                        gaaaTCCATGTCACCCTGCCATCCGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAAt                                                                    <  1:1414907/92‑1 (MQ=255)
                         aaaTCCATGTCACCCTGCCATCCGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAAtt                                                                   <  2:6697405/93‑1 (MQ=255)
                          aaTCCATGTCACCCTGCCATCCGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTg                                                                  <  1:2913955/93‑1 (MQ=255)
                           aTCCATGTCACCCTGCCATCCGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGc                                                                 >  1:7797642/1‑93 (MQ=255)
                            tCCATGTCACCCTGCCATCCGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGcg                                                                >  1:4030824/1‑92 (MQ=255)
                            tCCATGTCACCCTGCCATCCGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGcc                                                                >  2:9654894/1‑93 (MQ=255)
                             ccATGTCACCCTGCCATCCGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCg                                                               <  2:617939/93‑1 (MQ=255)
                               aTGTCACCCTGCCATCCGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTg                                                             >  1:2091652/1‑93 (MQ=255)
                                tGTCACCCTGCCATCCGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGTAATCTTTCGCCTGCTGGATATCAATTGCCGTGc                                                            >  1:8870680/1‑93 (MQ=255)
                                tGTCACCCTGCCATCCGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGc                                                            >  1:7274773/1‑93 (MQ=255)
                                tGTCACCCTGCCATCCGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGc                                                            <  2:8103102/93‑1 (MQ=255)
                                tGTCACCCTGCAATCCGGCGGCGGAATAACGTACGTAGAGGAGGAAATGGCTGGGTGCGTAATCTTTCGCCTGCTGGATATCAATTGCCGTGc                                                            >  2:5411535/1‑93 (MQ=255)
                                 gTCACCCTGCCATCCGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGcc                                                           <  2:2736596/93‑1 (MQ=255)
                                  tCACCCTGCCATCCGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGTAATCTTTCGCCTGCTGGATATCAATTGCCGTGCca                                                          <  2:1374632/93‑1 (MQ=255)
                                  tCACCCTGCCATCCGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCca                                                          >  1:9284846/1‑93 (MQ=255)
                                   cACCCTGCCATCCGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCcaa                                                         <  2:4924974/93‑1 (MQ=255)
                                    aCCCTGCCATCCGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCcaac                                                        >  1:6638792/1‑93 (MQ=255)
                                     cccTGCCATCCGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCcaaca                                                       <  2:9192007/93‑1 (MQ=255)
                                     cccTGCCATCCGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCcaaca                                                       <  1:8444216/93‑1 (MQ=255)
                                       cTGCCATCCGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACaaa                                                     >  2:1771946/1‑93 (MQ=255)
                                        tGCCATCCGTCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAAc                                                    <  1:2504816/93‑1 (MQ=255)
                                        tGCCATCCGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAAc                                                    >  1:9872671/1‑93 (MQ=255)
                                         gCCATCCGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAAcc                                                   >  1:5581160/1‑93 (MQ=255)
                                          ccATCCGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCa                                                  >  2:5188111/1‑93 (MQ=255)
                                           cATCCGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCAg                                                 <  2:5587989/93‑1 (MQ=255)
                                            aTCCGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCAGt                                                <  1:3595586/93‑1 (MQ=255)
                                            aTCCGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCAGt                                                >  2:3453271/1‑93 (MQ=255)
                                             tCCGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCAGtt                                               <  2:205467/93‑1 (MQ=255)
                                             tCCGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCAGtt                                               <  2:2996333/93‑1 (MQ=255)
                                             tCCGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCAGtt                                               >  1:10035022/1‑93 (MQ=255)
                                              ccGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCAGTTg                                              >  2:6029752/1‑93 (MQ=255)
                                                ggcggcggAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCAGTTGGa                                            <  1:3142104/93‑1 (MQ=255)
                                                 gcggcggAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGTAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCAGTTGGaa                                           <  1:5773115/93‑1 (MQ=255)
                                                 gcggcggAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCAGTTGGaa                                           <  1:7196198/93‑1 (MQ=255)
                                                 gcggcggAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCAGTTGGaa                                           >  1:4407919/1‑93 (MQ=255)
                                                 gcggcggAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCAGTTGGaa                                           >  1:8316420/1‑93 (MQ=255)
                                                  cggcggAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCAGTTGGAAg                                          <  2:1368875/93‑1 (MQ=255)
                                                   ggcggAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCAGTTGGAAGt                                         <  2:4564999/93‑1 (MQ=255)
                                                    gcggAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCAGTTGGAAGTa                                        <  2:6575860/93‑1 (MQ=255)
                                                     cggAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCAGTTGGAAGTaa                                       <  2:8717706/93‑1 (MQ=255)
                                                      ggAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCAGTTGGAAGTAac                                      <  1:2731194/93‑1 (MQ=255)
                                                      ggAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCAGTTGGAAGTAac                                      >  2:803502/1‑93 (MQ=255)
                                                      cgAATACCGTACGTAGAGCAGGAAATGGCTGGCTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCAGTTGGAAGTAac                                      <  2:581601/92‑1 (MQ=255)
                                                       gAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCAGTTGGAAGTAaca                                     >  2:3902210/1‑93 (MQ=255)
                                                       gAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCAGTTGGAAGTAaca                                     <  2:7174849/93‑1 (MQ=255)
                                                        aaTAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCAGTTGGAAGTAacac                                    >  2:4228995/1‑93 (MQ=255)
                                                         aTAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCAGTTGGAAGTAACAcg                                   <  2:8310768/93‑1 (MQ=255)
                                                         aTAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCAGTTGGAAGTAACAcg                                   >  2:2603477/1‑93 (MQ=255)
                                                          tAACGTACGTAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCAGTTGGAAGTAACAcgt                                  <  2:8803751/93‑1 (MQ=255)
                                                            acgtacgtAGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCAGTTGGAAGTAACAcgtcg                                >  2:7101168/1‑93 (MQ=255)
                                                              gtacgtaGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCAGTTGGAAGTAACACGTCGtt                              >  2:8579301/1‑93 (MQ=255)
                                                               tacgtaGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCAGTTGGAAGTAACACGTCGTTc                             >  2:6836306/1‑93 (MQ=255)
                                                                acgtaGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCAGTTGGAAGTAACACGTCGTTCa                            >  2:1573211/1‑93 (MQ=255)
                                                                   taGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCAGTTGGAAGTAACACGTCGTTCAAGt                         >  1:4217967/1‑93 (MQ=255)
                                                                   taGAGCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCAGTTGGAAGTAACACGTCGTTCAAGt                         >  2:2663522/1‑93 (MQ=255)
                                                                     gagCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCAGTTGGAAGTAACACGTCGTTCAAGTaa                       <  1:5251435/93‑1 (MQ=255)
                                                                     gagCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCAGTTGGAAGTAACACGTCGTTCAAGTaa                       <  2:4189846/93‑1 (MQ=255)
                                                                     gagCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCAGTTGGAAGTAACACGTCGTTCAAGTaa                       >  1:3750267/1‑93 (MQ=255)
                                                                     gagCAGGAAATGGCTGGGTGCGCAATCTTTCCCCTGCTGGATATCAATTGCCGTGCCAACAAACCAGTTGGAAGTAACACGTCGTTCAAGTaa                       >  2:1011533/1‑93 (MQ=255)
                                                                      agCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCAGTTGGAAGTAACACGTCGTTCAAGTAAt                      >  1:536683/1‑93 (MQ=255)
                                                                       gCAGGAAATGGCTGGGTGCGTAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCAGTTGGAAGTAACACGTCGTTCAAGTAAtc                     >  2:3176476/1‑92 (MQ=255)
                                                                       gCAGGAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCAGTTGGAAGTAACACGTCGTTCAAGTAATg                     >  1:6765484/1‑93 (MQ=255)
                                                                          ggAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCAGTTGGAAGTAACACGTCGTTCAAGTAATGccc                  >  1:8684833/1‑93 (MQ=255)
                                                                          ggAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCAGTTGGAAGTAACACGTCGTTCAAGTAATGccc                  <  1:7575734/93‑1 (MQ=255)
                                                                          ggAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCAGTTGGAAGTAACACGTCGTTCAAGTAATGccc                  >  2:7333335/1‑93 (MQ=255)
                                                                          ggAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCAGTTGGAAGTAACACGTCGTTCAAGTAATGccc                  >  1:9101593/1‑93 (MQ=255)
                                                                          ggAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCAGTTGGAAGTAACACGTCGTTCAAGTAATGccc                  >  1:154465/1‑93 (MQ=255)
                                                                           gAAATGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCAGTTGGAAGTAACACGTCGCTCAAGTAATGACcg                 >  1:3990434/1‑93 (MQ=255)
                                                                              aTGGCTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCAGTTGGAAGTAACACGTCGTTCAAGTAATGCCCgcgc              >  1:323202/1‑93 (MQ=255)
                                                                                  cTGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCAGTTGGAAGTAACACGTCGTTCAAGTAATGCCCGCGCCgtg          >  2:9009255/1‑93 (MQ=255)
                                                                                   tGGGTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCAGTTGGAAGTAACACGTCGTTCAAGTAATGCCCGCGCCgtgt         <  2:436285/93‑1 (MQ=255)
                                                                                    gggTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCAGTTGGAAGTAACACGTCGTTCAAGTAATGCCCGCGCCGTGTa        >  2:7600483/1‑93 (MQ=255)
                                                                                    gggTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCAGTTGGAAGTAACACGTCGTTCAAGTAATGCCCGCGCCGTGTa        >  2:2547381/1‑93 (MQ=255)
                                                                                    gggTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCAGTTGGAAGTAACACGTCGTTCAAGTAATGCCCGCGCCGTGTa        >  1:1321460/1‑93 (MQ=255)
                                                                                     ggTGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCAGTTGGAAGTAACACGTCGTTCAAGTAATGCCCGCGCCGTGTAg       >  1:7344567/1‑93 (MQ=255)
                                                                                       tGCGCAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCAGTTGGAAGTAACACGTCGTTCAAGTAATGCCCGCGCCGTGTAGcc     >  1:9441173/1‑93 (MQ=255)
                                                                                           |                                                                                           
GTAAGGTATCAGCGGCTGCGGCGGTAAATCCATGTCACCCTGCCATCCGGCGGCGGAATAACGTACGTAGAGCAGGAAATGGCTGGGTGCGTAATCTTTCGCCTGCTGGATATCAATTGCCGTGCCAACAAACCAGTTGGAAGTAACACGTCGTTCAAGTAATGCCCGCGCCGTGTAGCCGAA  >  NC_000913/3683342‑3683524

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: