BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,724,581	T→C	Q137R (CAG→CGG)	yiaA ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,724,581	0	T	C	100.0%	2272.2 / NA	696	Q137R (CAG→CGG)	yiaA	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (332/364); total (332/364)

Only 100 of 729 total aligned reads displayed.

AGAAACAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCTGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCCAGTCCA  >  NC_000913/3724491‑3724670

aGAAACAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCcgt                                                                                         >  1:4388891/1‑93 (MQ=255)

 gAAACAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCcgtg                                                                                        <  2:4109734/93‑1 (MQ=255)

     cAGATTAGTGAGTTAAGTAAAAGTCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTc                                                                                    <  2:5527251/93‑1 (MQ=255)

     cAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGtttt                                                                                    >  1:4979866/1‑92 (MQ=255)

      aGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCt                                                                                   <  1:6151072/93‑1 (MQ=255)

       gATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCtt                                                                                  >  1:7408433/1‑93 (MQ=255)

       gATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCtt                                                                                  <  1:7558403/93‑1 (MQ=255)

       gATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCtt                                                                                  >  2:1338206/1‑93 (MQ=255)

       gATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCtt                                                                                  <  2:1451787/93‑1 (MQ=255)

        agttgTGAGGTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTAGTCTTCCTGGGTAACCCGTGTGTCctt                                                                                 >  2:8924863/5‑93 (MQ=255)

        aTTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCttt                                                                                 <  2:4392865/93‑1 (MQ=255)

        aTTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCttt                                                                                 <  2:6263711/93‑1 (MQ=255)

        aTTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCttt                                                                                 <  2:7809162/93‑1 (MQ=255)

        aTTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCT‑GGTAACCCGTGTTTCtttt                                                                                >  1:7126607/1‑93 (MQ=255)

         ttAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCtttt                                                                                >  1:6962165/1‑93 (MQ=255)

          tAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTtg                                                                               >  2:7048338/1‑93 (MQ=255)

           aGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTtgg                                                                              <  2:4946729/93‑1 (MQ=255)

            gTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTtggt                                                                             >  1:2514645/1‑93 (MQ=255)

             tGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTtggtg                                                                            >  2:2983513/1‑93 (MQ=255)

             tGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTtggtg                                                                            <  2:661768/93‑1 (MQ=255)

              gAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTtggtgg                                                                           <  1:8264952/93‑1 (MQ=255)

               aGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTggg                                                                          >  1:8466040/1‑93 (MQ=255)

               aGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTggg                                                                          >  2:2391054/1‑93 (MQ=255)

                 ttAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGtt                                                                        <  2:7594202/93‑1 (MQ=255)

                 ttAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGtt                                                                        >  1:9609888/1‑93 (MQ=255)

                 ttAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGtt                                                                        <  2:3141427/93‑1 (MQ=255)

                  tAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGttt                                                                       >  1:1115575/1‑93 (MQ=255)

                    aGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTAt                                                                     <  1:6525927/93‑1 (MQ=255)

                       aaaaGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTcc                                                                  >  2:3269672/1‑93 (MQ=255)

                       aaaaGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTcc                                                                  <  1:9226566/93‑1 (MQ=255)

                       aaaaGCCCGGTCACATTGGACCGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTcc                                                                  <  1:577515/93‑1 (MQ=255)

                          aGCCCGGTCACATTGGACTGACCGGGCTTACGTGATTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGc                                                               <  2:1722937/93‑1 (MQ=255)

                           gcgcGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCa                                                              <  1:891718/90‑1 (MQ=255)

                           gCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCa                                                              >  1:335360/1‑93 (MQ=255)

                            cccGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCAt                                                             <  1:1881587/93‑1 (MQ=255)

                              cGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCa                                                           <  1:2772356/93‑1 (MQ=255)

                              cGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCa                                                           >  2:9162453/1‑93 (MQ=255)

                              cGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCa                                                           <  2:720391/93‑1 (MQ=255)

                              cGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCa                                                           <  2:2696399/93‑1 (MQ=255)

                              cGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCa                                                           <  1:4853167/93‑1 (MQ=255)

                               ggTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCAc                                                          <  2:3409041/93‑1 (MQ=255)

                               ggTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCAc                                                          <  1:5246186/93‑1 (MQ=255)

                               ggTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCAc                                                          <  2:641599/93‑1 (MQ=255)

                                gTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACg                                                         >  1:9424676/1‑93 (MQ=255)

                                gTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACg                                                         <  2:8850696/93‑1 (MQ=255)

                                 tCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGa                                                        >  2:5340458/1‑93 (MQ=255)

                                  cacaTTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGaa                                                       <  1:636142/93‑1 (MQ=255)

                                      ttGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATAtt                                                   <  1:5395876/93‑1 (MQ=255)

                                      ttGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATAtt                                                   >  2:577435/1‑93 (MQ=255)

                                        ggACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATAtttt                                                 <  1:1000070/93‑1 (MQ=255)

                                        ggACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATAtttt                                                 <  2:1140528/93‑1 (MQ=255)

                                        ggACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATAtttt                                                 <  1:242834/93‑1 (MQ=255)

                                         gACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATAttttt                                                <  1:8084964/93‑1 (MQ=255)

                                           cTGTCCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCt                                              <  1:5120696/93‑1 (MQ=255)

                                            tGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATAttttt                                                <  1:4229249/90‑1 (MQ=255)

                                            tGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTg                                             >  2:5075552/1‑93 (MQ=255)

                                            tGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTg                                             <  2:930511/93‑1 (MQ=255)

                                             gACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGc                                            <  1:4676578/93‑1 (MQ=255)

                                              aCCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCa                                           >  1:2645209/1‑93 (MQ=255)

                                              aCCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCa                                           <  1:3988605/93‑1 (MQ=255)

                                               ccGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCAc                                          <  1:5570491/93‑1 (MQ=255)

                                               ccGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCAc                                          >  1:9997102/1‑93 (MQ=255)

                                               ccGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCAc                                          <  2:4625639/93‑1 (MQ=255)

                                                 gggCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCg                                        >  1:6646213/1‑93 (MQ=255)

                                                  ggCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGc                                       >  2:3867180/1‑93 (MQ=255)

                                                    cTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTa                                     <  1:1774440/93‑1 (MQ=255)

                                                    cTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTa                                     >  1:8152978/1‑93 (MQ=255)

                                                    cTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTa                                     <  2:4254971/93‑1 (MQ=255)

                                                      tACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACt                                   >  1:8857864/1‑93 (MQ=255)

                                                          tGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCAc                               >  2:2169892/1‑93 (MQ=255)

                                                          tGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCAc                               <  2:6063547/93‑1 (MQ=255)

                                                           gAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCAcc                              <  2:9760715/93‑1 (MQ=255)

                                                              ttATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCaaa                           <  1:3589227/93‑1 (MQ=255)

                                                               tATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAAc                          <  1:1291082/93‑1 (MQ=255)

                                                               tATTCGCTGTACTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGTCATCACGAATATTTTTCTGCACCGCTACTGCACCAAAc                          <  2:8102117/93‑1 (MQ=255)

                                                                aTTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCAGCGCTACTGCACCAAACa                         <  2:7364336/93‑1 (MQ=255)

                                                                aTTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACa                         >  2:2828416/1‑93 (MQ=255)

                                                                 ttCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACaa                        <  1:9019117/93‑1 (MQ=255)

                                                                  tCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCCACTGCACCAAACAAg                       >  1:2245030/1‑93 (MQ=255)

                                                                     cTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCta                    >  2:9653631/1‑92 (MQ=255)

                                                                      tGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTa                   >  1:5922278/1‑93 (MQ=255)

                                                                      tGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTa                   <  1:9791819/93‑1 (MQ=255)

                                                                       gTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTaa                  >  1:7751075/1‑93 (MQ=255)

                                                                       gTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGATACTGCACCAAACAAGCTTaa                  <  1:1633064/93‑1 (MQ=255)

                                                                          ttcttcCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTaagaa               <  2:5713737/93‑1 (MQ=255)

                                                                              tcCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGaaa           >  1:144416/1‑93 (MQ=255)

                                                                              tcCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGaaa           >  2:8439026/1‑93 (MQ=255)

                                                                               ccTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCTGGCATCACGAATATTTTTCTTCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAg          >  2:8711950/1‑93 (MQ=255)

                                                                               ccTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAg          >  2:3600018/1‑93 (MQ=255)

                                                                               ccTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAg          >  2:372753/1‑93 (MQ=255)

                                                                               ccTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAg          <  2:9498024/93‑1 (MQ=255)

                                                                                cTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGc         <  2:59110/93‑1 (MQ=255)

                                                                                 tGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGcc        >  2:7519629/1‑93 (MQ=255)

                                                                                 tGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGcc        <  2:1890041/93‑1 (MQ=255)

                                                                                   ggTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCCAg      >  1:8620317/1‑93 (MQ=255)

                                                                                   ggTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCCAg      <  1:2027296/93‑1 (MQ=255)

                                                                                     tAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCCAGTc    >  1:2913186/1‑93 (MQ=255)

                                                                                      aaCCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCCAGTcc   <  1:4486380/93‑1 (MQ=255)

                                                                                       aCCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCCAGTCCa  >  1:3078436/1‑93 (MQ=255)

                                                                                       aCCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCCAGTCCa  >  1:6699044/1‑93 (MQ=255)

AGAAACAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCTGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCCAGTCCA  >  NC_000913/3724491‑3724670

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`