Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,755,517 T→C intergenic (‑63/+127) yiaY ← / ← selB putative oxidoreductase/selenocysteinyl‑tRNA‑specific translation factor

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,755,5170TC99.5% 1322.8 / ‑3.7 406intergenic (‑63/+127)yiaY/selBputative oxidoreductase/selenocysteinyl‑tRNA‑specific translation factor
Reads supporting (aligned to +/- strand):  ref base T (0/2);  new base C (23/381);  total (23/383)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.69e-01

Only 100 of 414 total aligned reads displayed.

AAGGAATAAAGAACGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATATGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGCTTTTTTTAAATTCATAAGAATTT  >  NC_000913/3755427‑3755606
                                                                                          |                                                                                         
aggaaaTAAAGAACGTTGAAGCTGCCATATCACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGAATTTTCATTCTAAAATACGa                                                                                         <  2:5562562/89‑1 (MQ=255)
aaGGAATAAAGAACGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGa                                                                                         <  1:8942273/93‑1 (MQ=255)
 acgAATAAAGAACGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGAt                                                                                        <  1:9484020/91‑1 (MQ=255)
 aGGAATAAAGAACGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGAt                                                                                        <  2:3652006/93‑1 (MQ=255)
 aGGAATAAAGAACGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGAt                                                                                        <  2:8713280/93‑1 (MQ=255)
  ggAATAAAGAACGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATc                                                                                       <  2:7090384/93‑1 (MQ=255)
  ggAATAAAGAACGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATc                                                                                       <  2:9296108/93‑1 (MQ=255)
   gAATAAAGAACGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCa                                                                                      <  2:6707056/93‑1 (MQ=255)
    aaTAAAGAACGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAg                                                                                     <  1:6180160/93‑1 (MQ=255)
    aaTAAAGAACGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAg                                                                                     <  1:725326/93‑1 (MQ=255)
    aaTAAAGAACGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAg                                                                                     <  1:366923/93‑1 (MQ=255)
     aTAAAGAACGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGt                                                                                    <  2:7915603/93‑1 (MQ=255)
     aTAAAGAACGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGt                                                                                    <  2:3447462/93‑1 (MQ=255)
     aTAAAGAACGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGt                                                                                    <  1:2702967/93‑1 (MQ=255)
      tAAAGAACGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGta                                                                                   <  2:283402/93‑1 (MQ=255)
      aaaaGAACGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGta                                                                                   <  2:5817747/92‑1 (MQ=255)
      aaaaGAACGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGta                                                                                   <  1:4778105/92‑1 (MQ=255)
        aaGAACGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGtatt                                                                                 <  2:1139194/93‑1 (MQ=255)
        aaGAACGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGtatt                                                                                 <  1:9103854/93‑1 (MQ=255)
        aaGAACGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGtatt                                                                                 <  2:5912902/93‑1 (MQ=255)
          aaaCGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGtattat                                                                               <  1:1049682/92‑1 (MQ=255)
            aCGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTg                                                                             <  1:2529714/93‑1 (MQ=255)
              gTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGAt                                                                           >  2:2664428/1‑93 (MQ=255)
              gTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGAt                                                                           <  2:4207428/93‑1 (MQ=255)
                tGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTa                                                                         <  1:2869060/93‑1 (MQ=255)
                tGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTa                                                                         <  1:5770223/93‑1 (MQ=255)
                 gAATCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTAt                                                                        <  2:306916/93‑1 (MQ=255)
                 gAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTAt                                                                        <  2:6093911/93‑1 (MQ=255)
                 gAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTAt                                                                        <  2:1944778/93‑1 (MQ=255)
                  aaGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATc                                                                       >  1:6028803/1‑93 (MQ=255)
                   aGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCa                                                                      <  1:4657009/93‑1 (MQ=255)
                    gCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCaa                                                                     <  2:10009963/93‑1 (MQ=255)
                     cTGCCATAACACACTGCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCaaa                                                                    <  1:1368745/93‑1 (MQ=255)
                     cTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCaaa                                                                    <  2:7119292/93‑1 (MQ=255)
                      tGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCaaaa                                                                   <  1:7790847/93‑1 (MQ=255)
                        ccATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAAtt                                                                 <  1:5798145/93‑1 (MQ=255)
                        ccATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAAtt                                                                 <  1:2036657/93‑1 (MQ=255)
                        ccATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATAAGTATTATTGATTATCAAAAtt                                                                 <  2:6408873/93‑1 (MQ=255)
                         cATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTa                                                                <  2:4779219/93‑1 (MQ=255)
                           tAACACGCGCCTGAAAGTGGAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAAt                                                              <  2:2304374/93‑1 (MQ=255)
                           tAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAAt                                                              <  2:1362672/93‑1 (MQ=255)
                              cacacTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCta                                                           <  1:7443365/93‑1 (MQ=255)
                                 gcTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCtaata                                                        <  1:8366892/92‑1 (MQ=255)
                                  cTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCtaataa                                                       <  1:5293722/93‑1 (MQ=255)
                                   tCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATaaa                                                      <  2:4614683/93‑1 (MQ=255)
                                     cTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATaaaaa                                                    <  2:2013401/93‑1 (MQ=255)
                                       gAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGc                                                  <  1:3375795/93‑1 (MQ=255)
                                        aaaGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGca                                                 <  2:9158203/93‑1 (MQ=255)
                                         aaGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGcac                                                <  2:8614879/93‑1 (MQ=255)
                                         aaGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGcac                                                <  1:2647845/93‑1 (MQ=255)
                                           gtgtAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACAt                                              <  1:4886708/93‑1 (MQ=255)
                                           gtgtAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACAt                                              <  2:5139283/93‑1 (MQ=255)
                                            tgtAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACAtt                                             <  2:289349/93‑1 (MQ=255)
                                             gtAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTg                                            <  1:7373519/93‑1 (MQ=255)
                                                 aaaaGGGCGGGCAGCTTACTGAGGATTTGCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTAtt                                        <  1:8210712/93‑1 (MQ=255)
                                                  aaaGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTc                                       >  1:5056804/1‑93 (MQ=255)
                                                   aaGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCa                                      <  2:7730334/93‑1 (MQ=255)
                                                   aaGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCa                                      <  2:9466218/93‑1 (MQ=255)
                                                   aaGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCa                                      <  2:2947477/93‑1 (MQ=255)
                                                     gggcgggcAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCAtt                                    <  1:3024203/93‑1 (MQ=255)
                                                     gggcgggcAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCAtt                                    <  2:7500012/93‑1 (MQ=255)
                                                      ggcgggcAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTa                                   <  2:8446002/93‑1 (MQ=255)
                                                      ggcgggcAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTa                                   <  1:3915128/93‑1 (MQ=255)
                                                      ggcgggcAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTa                                   <  1:7965299/93‑1 (MQ=255)
                                                       gcgggcAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTaa                                  <  1:3211074/93‑1 (MQ=255)
                                                       gcgggcAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTaa                                  <  2:4009038/93‑1 (MQ=255)
                                                         gggcAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAAc                                <  2:8776557/93‑1 (MQ=255)
                                                         gggcAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAAc                                <  1:921199/93‑1 (MQ=255)
                                                          ggcAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACa                               >  2:5242097/1‑93 (MQ=255)
                                                          ggcAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACa                               <  1:6884681/93‑1 (MQ=255)
                                                           gcAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACaa                              <  1:5209267/93‑1 (MQ=255)
                                                             aGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAAtg                            <  1:7058358/93‑1 (MQ=255)
                                                              gCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAAtgt                           <  1:6492831/93‑1 (MQ=255)
                                                                  aCTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGCtt                       <  1:6735745/93‑1 (MQ=255)
                                                                    tGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGCtttt                     <  1:9309542/93‑1 (MQ=255)
                                                                    tGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGCtttt                     <  2:6315666/93‑1 (MQ=255)
                                                                     gAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGCttttt                    <  1:8606836/93‑1 (MQ=255)
                                                                        gATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGCTTTTTTTa                 <  1:1867561/93‑1 (MQ=255)
                                                                          ttttCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGCTTTTTTTaaa               <  1:6382744/93‑1 (MQ=255)
                                                                          ttttCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGCTTTTTTTaaa               <  2:5659517/93‑1 (MQ=255)
                                                                            ttCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGCTTTTTTTAAAtt             <  2:664206/93‑1 (MQ=255)
                                                                            ttCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGCTTTTTTTAAAtt             <  2:9915208/93‑1 (MQ=255)
                                                                            ttCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGCTTTTTTTAAAtt             <  2:2393890/93‑1 (MQ=255)
                                                                             tCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGCTTTTTTTAAATTc            <  2:1794118/93‑1 (MQ=255)
                                                                               aTTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGCTTTTTTTAAATTCAt          <  1:225256/93‑1 (MQ=255)
                                                                               aTTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGCTTTTTTTAAATTCAt          <  1:235662/93‑1 (MQ=255)
                                                                               aTTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGCTTTTTTTAAATTCAt          <  1:5509481/93‑1 (MQ=255)
                                                                                ttCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGCTTTTTTTAAATTCATa         <  2:5432981/93‑1 (MQ=255)
                                                                                ttCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGCTTTTTTTAAATTCATa         <  2:7317557/93‑1 (MQ=255)
                                                                                ttCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGCTTTTTTTAAATTCATa         <  1:7152115/93‑1 (MQ=255)
                                                                                 tCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGCTTTTTTTAAATTCATaa        >  1:9884708/1‑93 (MQ=255)
                                                                                 tCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGCTTTTTTTAAATTCATaa        <  2:7634197/93‑1 (MQ=255)
                                                                                 tCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGCTTTTTTTAAATTCATaa        >  2:1467791/1‑93 (MQ=255)
                                                                                  cGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGCTTTTTTTAAATTCATAAg       <  1:9744293/93‑1 (MQ=255)
                                                                                   gAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGCTTTTTTTAAATTCATAAGa      <  2:3942035/93‑1 (MQ=255)
                                                                                   gAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGCTTTTTTTAAATTCATAAGa      <  1:4234904/93‑1 (MQ=255)
                                                                                   gAAAATACGATCAGTATTATTGATTATCAAAATTAAGCTAATAAAAAGCACATTGTATTCATTAAACAATGTGCTTTTTTTAAATTCATAAGa      <  1:4147398/93‑1 (MQ=255)
                                                                                    aaaaTACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGCTTTTTTTAAATTCATAAGaa     <  1:1299462/93‑1 (MQ=255)
                                                                                      aaTACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGCTTTTTTTAAATTCATAAGAAtt   <  1:4523870/93‑1 (MQ=255)
                                                                                       atacGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGCTTTTTTTAAATTCATAAGAAttt  <  2:8057509/93‑1 (MQ=255)
                                                                                          |                                                                                         
AAGGAATAAAGAACGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATATGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGCTTTTTTTAAATTCATAAGAATTT  >  NC_000913/3755427‑3755606

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: